Chlorella variabilis: CHLNCDRAFT_135879
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Entry
CHLNCDRAFT_135879 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvr03041
]
CHLNCDRAFT_135879
03009 Ribosome biogenesis [BR:
cvr03009
]
CHLNCDRAFT_135879
Enzymes [BR:
cvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CHLNCDRAFT_135879
Spliceosome [BR:
cvr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CHLNCDRAFT_135879
Ribosome biogenesis [BR:
cvr03009
]
Eukaryotic type
90S particles
Helicases
CHLNCDRAFT_135879
Pre-60S particles
CHLNCDRAFT_135879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_30
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
17353798
NCBI-ProteinID:
XP_005846554
JGI:
ChlNC64A_1_135879
UniProt:
E1ZJ75
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MRPWRAPRAGFAASQQSCRAYSWRHTTCYAPRGGQEAPRQQRQRRQRGEGGERSTDVGSG
GGFRAGGPPERQQQRQEQQEQDIPVVRPGQAASATFFSSDRWDALGASAEVVAALQTLGI
TRPSHIQAAAYRALAQSGARHVVLADHAGSGKTLAYLLPLLQVLREEERVLGAAATQPHC
PRLVVVVPTAELCAQVVRVCRALSRAGLRFRSAAATGGRPLRTQKEMLEGGVDVLVGTPG
RLAELLGEGCLQLTFCRAVVVDEVDVLLGEDFAFAEQVAPLRAAAPSTTRFVFATATIPE
QVYLDLEEAFPGLAAALGPGLHRTAPGITEQLVDCSGGDEVSAESGFQRKAAALFAVLQE
QRASRSIVFCNKIESCRKVENFLNRTFSHEDHAEVLPHHAAIADTHRDANLRRFLALPDS
SGGRRGGSASTNTPERLVLVCTDRASRGMDSAFVEHVVLFDMPRDPSEYLRRVGRTTRGA
GSSGVVSVLALGRQVRLAREIIDRNQGDLVLHRIPAVLPVAVERTDAERLRSNMAVSAAA
GAMPAAAAPPPAADSFETEQHGTSS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaggccttggcgagcaccgagggcggggtttgcggccagccagcagagctgtagggcg
tattcgtggcgccacacgacgtgctacgcgccccggggggggcaggaggctcccaggcag
cagcggcagcggcggcagaggggtgagggcggcgagcgcagtacagatgtaggcagcggg
ggcgggttccgagctggtggcccgccagagcgccagcagcaacggcaggagcaacaggag
caggacatcccagtggtgcggccggggcaggcagcgagcgccaccttcttctcgagcgac
cgctgggacgcgctgggtgccagcgcggaggtggtggcagcgctgcagacactgggcatc
acgcgtccgtcccacatccaggcggccgcctaccgcgctctggcgcagagcggcgcgcgg
cacgtggtgctggctgaccacgcaggcagtggcaagacgctggcctacctgctgccactg
ctgcaagtgctgcgcgaggaggagcgtgtgctgggtgccgccgccacgcaaccccactgc
ccccgcctggtggtggtggtgcccaccgcagagctgtgtgcacaggttgtgcgcgtgtgc
cgtgcactgtcacgcgcggggctgcgcttccgctcagcagctgccactgggggacggccg
ctgcgcacccagaaggagatgctggagggcggggtggatgtgctggtgggcacgcctggc
cgcctggcagagctgctgggcgagggctgcctgcagctcaccttttgccgcgccgtcgtg
gtggacgaggtggatgtgttgctgggggaagacttcgcgtttgccgagcaggtggcgcca
ctgcgggcagcagcccccagcaccacgcgctttgtatttgccactgccaccattccggag
caggtgtacctggaccttgaggaggcatttcctggcctggcagccgcactcgggcctggc
ctccaccgcactgcgccaggcatcaccgagcagctggtggactgcagcggcggtgacgaa
gtcagcgcggagagcggtttccagcgcaaggcggccgcactgtttgcggtgctgcaggag
cagcgggcctctcgctccattgtgttttgcaacaagatagagtcctgccgcaaggtggag
aacttcctgaaccgcaccttcagccatgaagaccatgcagaggtgctgccccaccatgct
gccatcgccgacacgcaccgtgatgccaacctgcggcgcttccttgcattgccagacagc
agcggcggccgtcgtggcggcagtgccagcaccaacacccctgagcggctggtgttggtg
tgcacggaccgtgccagccgcggcatggacagtgcgtttgtggaacacgtggtgctgttt
gacatgccgcgtgacccttcggagtacctgcgccgcgtggggcgcaccacacggggcgct
ggcagcagcggcgtggtgtcggtgctggcgctggggcgtcaggtgcgtctagctcgggag
atcatcgacagaaaccagggcgacctggtgctgcaccgcatcccggcagtgttgccagtg
gccgtggagcgcactgatgccgagcgcttgaggagcaacatggcggtatcagcagcagca
ggcgcgatgccagcagcagcagccccaccacctgcagccgattcttttgaaactgagcag
catggaacatccagctag
DBGET
integrated database retrieval system
