Chlorella variabilis: CHLNCDRAFT_135924
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Entry
CHLNCDRAFT_135924 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
cvr
Chlorella variabilis
Pathway
cvr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
CHLNCDRAFT_135924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvr04131
]
CHLNCDRAFT_135924
Membrane trafficking [BR:
cvr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
CHLNCDRAFT_135924
Hops complex
CHLNCDRAFT_135924
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
WD40
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
17353289
NCBI-ProteinID:
XP_005846081
JGI:
ChlNC64A_1_135924
UniProt:
E1ZJD7
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MAEDGYDEYEEWQLVGDAYYSRRELYRLDWGGGGSGGGGSFDLAFMRVFPAPAGGPIAAL
RDDSKLVLYVGGFTKPDVQVFSGAGAPLGRVLWDGGHVLAAGWTAGEQLLVLEAGAKVHM
FSVRGERLPRHLSLGAECEEEGGVEAAVLFRDGLALLTPAGHLWCVPDVHEPRLQRFPDP
APGLGGGGSGVHCMAVIPPSASSSGALELIAAVEDTVRVIDANEALPTPVFEGPILRLAV
SPCGKFVVGYGQDGTIHVWSSDLSEVMTRVGLAETELDLVDSLGADAVPDTLPDQLVWCG
SDAVLLFWEGLGALLVPLEGGWRWWDVGGGGAAAFATEVDGVRIITGGAHQLLRRVPPPA
ARVLELGSTHPGALLYDARRLFDAQDARATAAAAELDPLKQAALLKASCYGRAFTALEPG
AGGPRVGASPGPGAGGSGGGGSRAGTPSGGGGGGGGGGGRPRAVDVARRLRVLNALRDPA
IGMPLTMPQLEAEGLPAVVSRLVGRRHYLLAHRICQALALPSEQVLVRWACDKVTAAAAT
LPDDQLMEALQAKLAGQWGVKYAAVAAHAAAQGRRHLAALLLEHERCAAEQVPLLLELGE
DERALDKAVESGDSDLVFQVVHAMWRRLERATAAAAAGGGSARPGSVAGASQDRFWQAVA
RKPAALAFFAKYYRQQDPQLLLELYQAMGQQEAAAELHLQAALELAAGEQAHAAALAWCQ
QPQHPGCCVACVQRQCGKATETAVQRELARSKDAYTRSTDAAQGRDHKWEAAAVQALARL
REQQLELQSSSRREGFVGLPVADTIKLCLRLGLKDQATKLARDFKVPDRHLGLLGAQVLA
SQHDWRALQAMAGRADRKAGLSMEHFLAAARAHGAPAEVQRWFIDRITGEGALLRKAQHY
SELGMPAQARLLMEQAEQQGGSAAAGMLDSLRGTMGSLVSRVQAQGGGGGGAR
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggacggctacgacgagtacgaggagtggcagctggtgggcgatgcctactac
tcccgccgcgagctgtacaggctcgattggggcggcggcggcagcggcggcggcggctcc
tttgacctcgccttcatgcgcgtgttccccgcgcccgcgggcggccccatcgccgcgctg
cgggacgactccaagctggtgctgtatgtgggcggcttcaccaagccggatgtgcaggtt
ttcagcggggcgggggcgccgctggggcgcgtgctctgggacggcggccacgtgctggcc
gcggggtggaccgcaggggagcagctgctggtgctggaggcaggggccaaggtgcacatg
ttcagcgtgcgaggcgagcgcctgccccgccatctctccctgggcgccgagtgcgaggag
gagggcggggtggaggcggcggtgttgttccgggacggactggcgctgctgacgcccgcg
gggcacctctggtgcgtgcccgacgtgcacgagccgcgcctgcagcgcttcccagacccc
gcccccggcctgggcggcggcggctcgggagtacactgcatggcggtcatacccccctcc
gcctcgtcctcgggagccctggagttgatagcagcggtggaggacactgtgagggtgata
gatgccaacgaggcgctgcccaccccggtgttcgaggggcccatcctgaggctggcggtg
agtccgtgcggcaagtttgtggtggggtacggccaggacgggaccatccacgtgtggagc
tcagacctgtctgaggtgatgacgcgcgtggggctggcagagacggagctggaccttgtg
gactcgctgggggcagacgctgtgcccgacacgctgccagaccagctggtgtggtgcggc
agcgacgcggtgctgctcttctgggagggcctgggcgcgctgctggttccgctggagggc
ggctggcggtggtgggatgtgggcggcggcggcgccgcggcctttgccactgaagtggac
ggcgtgcgcatcatcaccggcggcgcccaccagctgctgcggcgcgtgccgccacccgcg
gcccgcgttttggagctgggatccacccacccgggggcgcttctctacgacgcacggcgg
ctgtttgatgcgcaggacgcgcgcgccacggcggcggccgcggagcttgaccctctcaag
caggcggccctactcaaagcctcctgctacggccgcgccttcaccgctctggagcccggg
gccggtggccccagggtcggcgcgtcgcccgggccaggtgctggcggcagcggcggcggc
gggagccgggcgggcaccccatcgggaggcggcggcggcggcggcggcggcggcgggcgg
cctcgggcggtggatgtggccaggaggctgagggtgctgaatgcactgagggaccccgcc
atcggcatgcccctgaccatgccccagctggaggccgagggcctgcctgcggtggtgtcc
cgcctcgtgggacgccgccactacctgctggcgcaccgcatctgccaggcgctggcgctg
cccagcgagcaggtgcttgtgcgctgggcgtgcgacaaggtcaccgccgccgccgccacg
ctgccggacgatcagctgatggaggcactgcaggctaagctggcggggcagtggggcgtg
aagtacgctgcggtggcggcgcacgcggcggcgcaggggcggcgccacctggccgcgctg
ctgctggagcacgagcgctgcgcggcggagcaagtgccgctgctgctggagctgggggaa
gacgagcgggcgctggacaaggctgttgagtctggggactcggaccttgtgttccaggtg
gtgcatgcaatgtggcgccgcctggagagggccacggctgcggcggccgccggcggcggc
tccgcgcggcctggctccgtggcgggggccagccaggaccggttctggcaggcggtggcg
cggaagccggctgcgctggccttcttcgccaagtactaccggcagcaggacccccagctt
ctgctggagctgtatcaggccatggggcagcaggaggcggccgccgagctgcacctccag
gcagcccttgagctcgctgcaggcgagcaggcgcacgccgccgcgctggcatggtgccag
cagccacagcaccctggctgctgcgttgcttgcgtgcagaggcagtgtggaaaggccacg
gagacggctgtacagagggagctggcccgcagcaaagatgcctacacccgctcaacagac
gcggcgcaggggcgggaccacaagtgggaggcggcggcggtgcaggcgctggcacggctg
cgcgagcagcagctggagctgcagagcagcagccgtcgggaggggtttgtgggcctgcct
gtggccgacaccatcaagctctgcctgcggctgggcctcaaggaccaggccaccaagctg
gcacgagacttcaaggtgcccgaccgccacctgggcctgctgggagcccaggtgctggcg
tcgcagcacgactggcgcgcgctgcaggcgatggcggggcgggcggaccgcaaggcgggc
ctgtccatggagcattttctggcggcggccagggcccacggcgcgcccgccgaggtgcag
cgctggttcatcgaccgcataaccggagagggcgcgctgctgcgcaaggcgcagcactac
agcgagctgggcatgcccgcccaggctaggcttctgatggagcaggcggagcagcagggc
gggtcggcggcggcgggcatgctggacagcctgcgcggcaccatgggcagccttgttagc
cgcgtgcaggcgcagggcggcggcggcggcggcgcgcggtag
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