Chlorella variabilis: CHLNCDRAFT_136485
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Entry
CHLNCDRAFT_136485 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvr03400
]
CHLNCDRAFT_136485
Enzymes [BR:
cvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CHLNCDRAFT_136485
DNA repair and recombination proteins [BR:
cvr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CHLNCDRAFT_136485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C1
Exo_endo_phos
SnoaL_2
SnoaL
Zn_ribbon_GRF
DUF4440
Peptidase_C1_2
SnoaL_3
Motif
Other DBs
NCBI-GeneID:
17353087
NCBI-ProteinID:
XP_005845901
JGI:
ChlNC64A_1_136485
UniProt:
E1ZKF9
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MPSQPQQQHTRVLSFNVNGLRALLRDRLKLTLSQFLISLNADIVCMQETKLRRCDIDRDL
AIVDGWDAFFSCSQSATGYSGTATYVRTAVALPFASEEGFTGCAALAAAMAGTTAGSHNG
AATMAEPHPALADQYTVEELAELDGEGRVTVTDHGAFVLFNIYGPAITKQEVAEDRMQYK
LRFFSALELRWRDLLRQGRAVVAVGDLNICPTPLDYPVADLQFFRPSRPDRLWLRRLLHG
STTTGGSNSGGGGGDQSPPAAAAAAAGSNGNGVAGIYGAGASSSNGGSGGILVDTFRAFH
PTRQNAFTCWSTATSARVNNYGSRIDLVLTAGISVGNPPPSPSTAAVAAAAAAAADDEAP
PAARRWHREAASPPGAMRFAFKGSQLKLHSWLQRGESAAQLLNSDPAASSSNGSQLLHGL
STAEQQQQQQTAATRPPGNHASCSSQLQAAASGLGSPRVAAASGGGSGSASGAGAAVGKK
QANLKSLFKRQQQGTQPVQLEQQQQQQQQQPVPPPWGSQQPPSQQSQQQQGEAGPNATSD
FFAAELAASTASRQQSPEAAKDAWRTIQQRFQVPQCPGHREPAVLKKVNKSGPNKGNAAG
RYFYTCARPDGPKPHGKCEFFKRLRANVTREEMFFNHRPLDLPQSHDLPTNFSWNDPNNT
GVSMLVPSWNQHIPQYCGSCWLHGTTSMIQDRLKIVKGGIGPDTMLARQVVLNCGAFHGY
GQGCGGGDVIDVLRYMAHFGLPDESCQPFSADDHTKYGRHARKCPADGYCTNCMPLKGRD
TCWSVHTPVRYYLSAFGKLEEPGELSMMNEIFHRGPITCSMATPEVFDYGLHTSVDVYPS
NISDPSEIDHDVEVVGWGQEEGEHGLKYWVIRNSWGTYWGEMGFFKMQRGVNALQLEAGD
CWYAIPTWEDEQAVRSGEKISSYLTRHSSEQLQRSVMAFCQAVNAHDLDKLHSYLSPKCV
WSDRVWSSVDLVGAAKVAKVYKETWRSYPDYTLHTEDVLARDDSNTVAVHFTATGTCFGE
WRGHPASGRRSTFSGVSLFVFDSERDDLIQQIITYRQPSSEEYAFYVGHEDL
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgcctagccagccccagcagcagcacacgcgagtgctaagcttcaacgtgaacgggctg
cgagcgctcttgcgcgacaggctgaagctgacgctgtcacaattcctaatcagcctcaat
gccgacatcgtttgcatgcaagagaccaagctgcggcggtgcgacatcgacagggacctg
gcgatagtggacggctgggacgccttcttttcttgctcccagtcagccacgggctacagc
ggcaccgcaacctatgtgcgcactgcagtggcgctgccctttgcgtcagaggagggcttc
accggctgtgcggcgctggccgccgccatggctgggaccacagccggcagccacaacggc
gccgcaacaatggctgagccgcaccctgccctggctgaccagtacactgtggaagagctg
gcggagttggatggcgaggggcgggtgaccgtgaccgaccacggcgcctttgtgctgttc
aacatttacggccctgccatcaccaagcaggaggtggctgaggaccggatgcagtacaag
ctgcgcttcttcagcgctttagagctgcggtggcgcgacctgctgcgccaggggcgcgcg
gtggtggcagtgggtgacctcaacatttgccccacgccgttggactatcctgtggcagac
ttgcagttcttcaggccatcccgcccagacaggctctggctacgccgcctgctgcacggc
agcaccaccaccggcggctcgaacagcggcggcggcggaggcgaccaatcgccgccagca
gcagcagcggcagcagcgggtagcaatggcaacggggtggcaggtatctacggtgccggt
gccagcagcagtaatggtggcagcggtggcatcctggtggacacattccgcgctttccac
cccacccgccagaatgcattcacctgctggagcaccgcgaccagcgccagggtgaacaac
tacggcagcaggattgacctcgtgctcacagcggggatcagtgtgggcaacccgccaccg
tccccttcaacggcagcagtggcggcagcagcagcagcggcagcagacgatgaggcgcca
cctgccgcacggaggtggcaccgagaggcagcatccccgcccggagccatgcgcttcgcc
ttcaaagggtcgcagctgaagctgcacagctggctgcagcgtggcgagtctgctgcgcag
ctcctgaacagcgatcccgcagccagcagcagcaacgggtcgcagctactccatggcctc
tccacagcagagcagcagcagcagcagcagacggcggccacgcggcctccaggcaatcac
gccagctgcagttcacagctccaggcagcagcctcgggtctgggcagcccgcgagtcgca
gcggcttctggtggcggcagtgggtctgcctcaggtgctggtgctgctgtaggcaagaag
caggcaaacctgaagagcttgttcaaacggcaacagcaggggacacagccggtgcagctt
gagcagcagcagcagcagcagcagcagcagcccgttccgccgccctggggctcccagcag
cctccatcccagcaatcccagcagcagcaaggggaggccggcccaaatgctaccagcgac
ttctttgctgccgagctggcggcatccacggccagccggcagcagtcaccggaggccgcc
aaggatgcctggcgcaccatacagcagcgcttccaggtgccgcagtgcccgggccaccgc
gagcctgcggtgctcaagaaggtgaacaagagcggccccaacaaaggcaacgctgcaggc
cgctacttctacacctgcgcccgccccgacggccccaagccgcacggcaagtgcgagttt
ttcaagcgcttgcgggctaacgtgacgcgggaggagatgtttttcaaccatcggccgcta
gacctgccccagtcgcacgacctccctacaaacttcagctggaatgaccccaacaacacc
ggcgtgtctatgctggtgccctcctggaaccaacacatcccgcagtactgcggctcctgc
tggctgcacggcaccacctccatgatccaggacagactgaagattgtcaagggcggcatc
ggcccagacaccatgcttgcccgccaggtggtgctcaactgcggcgcattccacggctat
ggccagggttgtggcggcggcgatgtgattgatgtgcttcgctatatggcgcactttggg
ttgccagatgagagctgccagccgtttagcgcagacgaccacaccaagtatgggcggcac
gccaggaagtgccccgccgacggctactgcaccaactgcatgccactcaagggtagggac
acgtgctggtcggtgcataccccggtgcgctactacctcagcgcctttgggaagctggag
gagcctggcgagctgagcatgatgaacgagattttccacagggggcccatcacctgctcc
atggccacgcctgaggtatttgactacggcctgcacacgagcgtggacgtctacccctcc
aacatctcagaccccagcgagatcgaccacgatgtggaggtggtgggctggggccaggag
gagggcgagcacggcctcaagtactgggtgatccgcaacagctggggcacgtactggggc
gagatgggcttcttcaagatgcagcgcggggtcaacgctctgcagctggaggcaggagac
tgctggtatgccatacccacctgggaagatgagcaggcggttcgatccggggagaagatc
tcctcctatctgacgcgtcacagctcagagcagttgcagcggagcgtgatggcattctgc
caagctgtgaatgcgcacgacttagacaaactgcacagctatctgtcccccaagtgcgtt
tggagcgacagggtttggtccagcgtcgacctcgtgggtgcagcgaaggtggccaaagtg
tacaaggagacgtggcggtcgtatcctgactataccctccacacagaagatgttctggcg
cgtgatgattcgaacacggtggcggtgcacttcacggccacgggcacctgcttcggcgag
tggcgggggcacccggcctcgggccgccgcagcaccttctcaggggtcagcttgtttgtg
tttgattccgagcgggacgacctcatccagcagatcatcacctaccgccagcccagcagc
gaggagtatgccttctatgtgggccacgaggacctgtga
DBGET
integrated database retrieval system
