KEGG   Chlorella variabilis: CHLNCDRAFT_136728
Entry
CHLNCDRAFT_136728 CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
cvr  Chlorella variabilis
Pathway
cvr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CHLNCDRAFT_136728
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvr03019]
    CHLNCDRAFT_136728
Enzymes [BR:cvr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     CHLNCDRAFT_136728
Messenger RNA biogenesis [BR:cvr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     CHLNCDRAFT_136728
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 17352971
NCBI-ProteinID: XP_005845669
JGI: ChlNC64A_1_136728
UniProt: E1ZKY2
LinkDB
Position
Unknown
AA seq 557 aa
MTGLFLEEQRGSYLDDMEDRYREMLASSRAFVINQFGLSAFVWEDGAYRARTYNFHLFPR
PSEGIDKRFVCQASSIDFLASCGFDFNKSIYDGIGYMPVALRDARLASVDRPPRERSEVL
VRKAEDVAFVKDTVASVAEWLQGEDLELVLPAVNSYQRLLQYQELRRPQFGVADPPGFYR
VAAEEGNGFQLRLTRAAPGEAEAWEAEQRQKRVEAIHTAAGFAAVMEAMRDSGKPAVGHN
LAFDLSYSLHSYAQELPGSWAEYKQLVGRWFPGGVYDTKFLSTAATGFPLFCHLEEQVEA
FLQEAALRSVAASGGSSDGEAAELPLVEHAAGFERYKGAATEAFAHEAGYDAYMTGAAFA
CLMRLYEADAAGAGVGGFLAPPAEQQPAVEAVRHLCWRMNISRSDMPYAALQGEDPIPDR
SHIFYVHGWGEGQRVYGGELVRRLADSGLGQVRATLVEGGLGALVEVGDPEAVPGAADVL
RQRYPGWTVAPYSEYADKRQQQRAEAAPGRRANGGNKRPRVDAEAAAAASKKAVASAARG
GGDDGAEEGKWGRCTIM
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgacggggctgttcctggaggagcagcgaggcagctatctggacgacatggaggatcgg
taccgtgagatgctggccagcagccgcgcctttgtgatcaaccagttcggcctgtcggcc
tttgtgtgggaggacggcgcctaccgcgcccgcacctacaacttccacctcttcccaagg
ccctctgagggcatcgacaagcgatttgtgtgccaggccagctccatcgacttcctcgcc
tcctgcggcttcgacttcaacaagtccatctacgacggcatcggctacatgccagtggcg
ctgcgtgatgcccgcctggcctctgtggaccgcccgcctcgggagcggtccgaggtgctg
gtgcgcaaggctgaggacgtggcgtttgtgaaggacacggtggcgtcggtcgcggagtgg
ctgcagggcgaggacctggagctggtactgccagctgtcaactcgtaccagcgcctgctg
cagtaccaggagctgaggcggccgcagtttggggtggccgacccgcccggcttctatagg
gtggcggcggaggaaggcaacggcttccagctgcgcctgacgcgcgccgcgccgggcgag
gcggaggcgtgggaggcggagcagcggcagaagcgcgtcgaggccatccacaccgcggcg
ggctttgcggcggtgatggaggcgatgcgcgacagcggcaagcccgccgtgggccacaac
ctcgcctttgacctctcctactccctccactcatacgcgcaggagctgccgggaagctgg
gcggagtacaagcagctggtggggcgctggttcccggggggcgtctacgacaccaagttt
ctttccactgccgccaccggctttccgctcttttgccatctcgaagagcaggtggaggcg
ttcctgcaggaggccgcgctgcggtcggtggcggccagcggcggcagcagcgacggcgag
gcggcggagctgcccttggtggagcatgcggccggtttcgagcggtacaagggagcggcg
accgaggcgttcgcgcacgaggctgggtatgatgcctacatgacgggagcggcctttgct
tgcctgatgcggctctacgaagccgacgcggcgggcgccggggtcggcggcttcctggcg
ccgcccgcggagcagcagccggcggtggaggctgtgcggcacctgtgctggcgcatgaac
atcagcaggtcggacatgccgtatgcggcgctgcagggcgaggatcccatccctgaccgc
tcacacatcttctatgtgcatggctggggcgagggccagcgcgtgtatggcggcgagctg
gtcaggcggctggcggactctgggctggggcaggtgcgggcgacgttggtggagggaggc
ctgggggcgctggtggaggtgggggaccccgaggcggtgccgggtgccgcggatgtgctg
cgccagcgctacccaggctggaccgtggcgccgtattcagagtatgccgacaagcggcag
cagcagcgtgccgaggcggcgccgggtcgccgcgccaatggcggcaacaagcggccgcgg
gtcgatgcggaggcggcggcggcggccagcaaaaaggcggtggcgtcggcggcgcggggc
ggcggcgacgacggtgcagaggaggggaagtgggggcggtgcaccatcatgtga

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