KEGG   Chlorella variabilis: CHLNCDRAFT_137967
Entry
CHLNCDRAFT_137967 CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K11374  elongator complex protein 2
Organism
cvr  Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cvr03016]
    CHLNCDRAFT_137967
Transfer RNA biogenesis [BR:cvr03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    CHLNCDRAFT_137967
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_Aladin EIF3I Beta-prop_EML WDR55 ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Ge1_WD40 WDR90_beta-prop_4th Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 17358876
NCBI-ProteinID: XP_005851529
JGI: ChlNC64A_1_137967
UniProt: E1Z4Y7
LinkDB
Position
Unknown
AA seq 1148 aa
MHSSTQADRLPADASVKLDHVGVGCNRVVHALHWGEGSGLLAYGAHNAVAVYHPEEARVL
GTLLGHTDVVTCVRWLPAGHGAAAALASGSGDCTVRLWLWTPHTPHQPWRLAATLQAHTA
PVTSVTIHDTGNGGLLLVSTAGDAEAVVWERDAATASSDDAGQALGQEAWRLRQRIPLGH
QLQHCSALAPLPGDPAWLLLALGGVDGGVRLYCCPPGGLFTAVCRLEGHQDWVRGLDFAQ
VEDGKLLLASASQDKNVRVWAVTRQQPDASGNGGCAASSGAADPASLAQRLTRYAPKPAI
HAGRHTYAATLEALLVGHEDWVHSVAWHPPAAGLGGGDGGGATATRPACLLTASMDRTMM
IWRPDAATGLWMGEESVGDAGANHLGYYGGGWGPGGAAIAAHGFTGALHIWRRQPDGGGW
LPQHALGGHFGPVVDACWAADGACLLTVSADQTARITTRMHGGHWCEIARPQVHGHDFAA
VAALPAGAGAGGQHPGAAAARQAGNAAAGPAAAACEEGRQRYLYASGSEEKVVRVFEAPR
AFTDTLAMARGRPDGGGGARGAVLGALLPALGLSNKAVYQEDGEEGQQQQAGNRAAAGVG
QSGGVAATGAAMYADGPDLAPHAAPSAVAGPPLEEHLCQNTLWPEVHKLYGHGNDLYCLA
ADPAGRYLASASRAQSADAAAIWLWDTRKWVGCAQLHTHTLTVTQLAFSPDGRWLASASR
DRTVAVFERQPATAGGAGAPEAAAAAFRLVGRIKAHTRIVWALHWSPDGRLLATASRDGK
VKVWRLGASSAAAASEAGSNGSAPAAALPSAPVATIECGDSVRSVQFAPVCRPGTSYYLA
AGLESGALQLLQLVADASSTPDAQPQQQQEPTFYRHQLNGPLCPGWVQTGLIDSWVARGF
ALPLTLTPCDLWPHLHGRTLFFMGDSMMLDFFKAAACFMIEFYKGPGLDHEPLTDDEELQ
ADFDAGQLMYGRALLLLPRVARPTDLLVVNFGLHHNSSDYAQHLVGFANYYHRHQRTLPR
LLWQQTSQQHFQTPAGEYPGGKPPFQCQKLEHFSVVGGGEIVLEQGFEDPGDILHGAWRN
KLADPIMRKAGIPILSSFNETLPMADMHQNNGHDHECTHYCHPSAPQWWLAALYHSLQNL
APAAAAPG
NT seq 3447 nt   +upstreamnt  +downstreamnt
atgcacagcagcacccaggcagatcgcctgccagcagacgccagcgtcaagctcgatcat
gtgggggtgggctgcaaccgagtggttcatgcgctgcactggggcgagggcagcgggctg
ctagcctacggagcccacaacgcggtggcggtgtaccacccagaggaggcaagggtgctg
ggcacactgctggggcacaccgacgtggtgacctgcgtgcgctggctgccagcgggccac
ggagcggccgcggcgctggcctctggctcgggcgactgcaccgtgcgcctctggctgtgg
actccccacacgccgcaccagccctggcgcctggcagccacgctgcaagcacacaccgct
cccgtcacctctgtgaccatccacgacacgggcaacggcggcctgctgctggtcagcacc
gcgggcgacgccgaggcggtggtgtgggagcgcgacgcggcgaccgccagcagcgacgac
gcggggcaggcgctggggcaggaggcgtggcgcctgcgccagcgcatccctctgggccac
cagctgcagcactgctccgcgctggcgccgctgcctggagaccccgcctggttgctgctg
gcgctgggcggcgtggatggcggcgtgcgcctctactgctgcccgcccggcggcctgttt
acggcggtgtgcaggctggaggggcaccaggactgggtccggggcctggactttgcgcag
gttgaggacggcaagctgctgctggccagcgcctcccaggacaagaacgtgcgcgtgtgg
gccgtcacgcggcagcagccagacgccagcggcaacggcggttgcgccgccagcagcggc
gccgcggaccccgcctcgctggcgcagcgcctcacccgctacgcccccaagccggccatc
cacgccgggcggcacacctacgccgccaccctggaggcgctgctggtggggcacgaggac
tgggtgcactcggtggcgtggcacccgccggctgcggggctcggcggcggcgacggcggc
ggcgccactgccacccgccccgcctgcctgctcactgcatccatggatcgcacgatgatg
atctggcgaccagacgcagccactgggctgtggatgggcgaggagtctgtgggcgatgcg
ggggccaaccatctggggtactatggcggcgggtggggccccggcggcgccgccatcgcc
gcccacggcttcaccggagcgctccacatctggcggcggcagcccgacggcggcggctgg
ctgccgcagcacgcgctgggcgggcactttgggccggtcgtggacgcctgctgggctgcc
gacggcgcctgcctgctcaccgtcagcgccgaccagaccgcgcgcatcaccacccgcatg
cacggcggccactggtgcgagattgctcgcccgcaggtgcacggccacgactttgctgcc
gtggccgccctgcccgcgggcgccggcgcgggaggccagcacccgggcgcggcagctgcc
cgccaggctggcaatgcagcggcaggcccggcggcggccgcctgcgaggaggggcggcag
cggtacctgtacgccagcggcagcgaggagaaggtggtgcgcgtgtttgaggcgccccgc
gccttcacagacaccctggccatggcgcgcggcaggccggacggcggcggcggcgcgcga
ggtgccgtgctgggcgcgctgctccccgctctgggcctttccaacaaggcggtgtaccag
gaggacggggaggaggggcagcagcagcaggcaggcaatagggctgcggctggggtgggc
cagagcggaggggtggcggccacgggtgcggcgatgtatgccgacggcccagacctggcc
ccccatgcggctcccagcgcggtggcggggcctcctctggaggagcacctgtgccagaac
acgctgtggccagaggtgcacaagctgtacggccacggcaacgacctgtactgcctggcg
gcagaccccgcggggcggtacctcgcctccgcctcccgcgcccagtctgcagacgcagcc
gccatctggctgtgggacacccgcaagtgggtgggctgcgcccagctgcacacccacacg
ctgacagttacgcagctggccttcagcccggatggccgctggctggcatccgcctcccgc
gaccgcacagtggcggtctttgagcggcagccggccaccgcaggcggggctggcgccccc
gaggcggctgcggcggccttccgcctggtggggcgcatcaaggcgcacacccgcatcgtg
tgggccctgcactggtcccccgacggccgcctgctggccacagcctcccgggacggcaag
gtcaaggtgtggaggctgggcgcttctagcgcagcagcggccagcgaggccggcagcaac
ggcagcgccccagcagcagcgctgccgtcggcgcctgttgcgaccatcgagtgcggcgac
agtgtgcgcagcgtgcagtttgcccctgtctgccggccaggcaccagctactacctggct
gccggcctggagagtggcgctctgcagctgctgcaactggttgctgatgccagcagcacg
cccgatgcccagccccagcagcagcaggagccaaccttttacaggcaccagctgaacggg
cccttgtgccccggctgggtgcaaaccggcctcatcgacagctgggtggcccgtgggttt
gcgctgccgctgacgttgactccatgcgacctgtggccacacctgcacggccgcacactc
tttttcatgggcgactcgatgatgctcgattttttcaaggccgccgcctgcttcatgatt
gagttctacaaagggcccgggttggatcatgagccgctgacggatgacgaggagctgcag
gccgacttcgacgccggccaactcatgtatggtcgtgcgttgttgctgctaccgagggtc
gcacggcccactgacctgctggtggtcaactttggcctgcatcacaacagcagcgactat
gcacagcatctggtcggatttgcaaactactaccaccggcaccagcgcacgctgcctcgt
ctgctgtggcagcagacctcgcagcagcacttccagacgccggcgggcgagtacccaggg
ggcaagccgccgttccaatgccagaaactagagcacttttctgtggtgggtgggggtgag
atcgtgctggagcaagggttcgaggaccccggcgacatcctgcacggcgcgtggcgcaac
aagttggccgaccccatcatgcgcaaagcaggcatccccatcttgtcatccttcaacgag
accctgcccatggcggacatgcaccagaacaacggccacgaccacgaatgcacacattac
tgtcatccctcggcgccgcagtggtggcttgcagcactctaccactcgctgcagaacctg
gcacccgcagcggcggcccctggctga

DBGET integrated database retrieval system