Chlorella variabilis: CHLNCDRAFT_138056
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Entry
CHLNCDRAFT_138056 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
cvr
Chlorella variabilis
Pathway
cvr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CHLNCDRAFT_138056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvr03019
]
CHLNCDRAFT_138056
Messenger RNA biogenesis [BR:
cvr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CHLNCDRAFT_138056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
Motif
Other DBs
NCBI-GeneID:
17358668
NCBI-ProteinID:
XP_005851274
JGI:
ChlNC64A_1_138056
UniProt:
E1Z556
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MSSKDRIATLRKRVATDPYDAEAWEKLVSEADRARRGSERNAALTAVYEDLLNVFPTAAG
YWREYADHQMSCSDESVVKGVFSRCLLTCLSVDLWRSYLNFIKRLNEPRGAEGLPEIRQA
YEFTLDRLGQDSACGGIWIDYIAFLQARLGGGGCGAPKQGSPEYAAVYGQALEGQDESQK
VAAVRRAYQRALLVPTSQLEGLWRGYEGFEVTGSNKQLARRLLDEWRPLYQAARGLLRER
EARLGAINLKALALPPGRGGATQQQQAALWREYLGWERGNPQRLDPATHAARVSLAFEQA
LMVLFHYPDIWLEFAGWHQQQGGGGGGAAAAAVLEKGRGALPTALALHFAAADLQESLGN
AAGAKAIYEELVEGLRPAEEAAAGGAAPAAAAASPAAPASTAPAASPAAPPAALPAAPPA
AAPPASPAAAAAGAGGEGAQQAGEPAATGAEQQQQQQQDGGGAGEAQLKAGPEEAAAADG
AAQGGEAPPPPPPPAAPQQQAEVKAEPGTKAEVKAEPDQQAAEAAAAAPAPAPPGVQLAP
EQGTLAWVQYMRFAKRTGGIMAARKVGWRWLGDIPNTRALFERALTAAAPQAAAQLWDAY
VAFEYDVGSLAAAAAVEARRAAAAEAAREAAAAAAAGAALDGKAAAAAAQAAAQAQQAPQ
HEALHLALLKYRVQDLWPASEGQRAYMERLLGQAPAPESGEARAREPDSGSRRDRGERER
GSERGEPRRGGDGERSRCRRGGERGGHAPRSPPRDAEPLRLSRELAQLMSQLPPPHALEG
PIPDVERLVQVILGADLSPDGIIAHEVAAARERRRQRRLAEQGGGSPVGLGPAGGGYAGP
PGASGVGQKRKALQEFDSGSESEEEERGHNGGGGGAAPGGATDGGAPAAGGLDVYRMRRK
QQRGP
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaaggaccgcatagcaacgctgcgcaagcgtgttgcaacggacccctatgat
gcggaggcctgggagaagcttgtctcagaggccgaccgcgctcggcgcggctctgaacgc
aacgcggcgctgacagcggtgtacgaggacctgctgaatgtgttcccaacggcggcgggg
tactggcgggagtatgcagaccaccagatgagctgcagcgacgagagcgtggtgaagggc
gtcttctcccgctgcctgctcacctgcctgtctgtggacctctggcgctcctatctcaac
ttcatcaagcggctcaacgagccgcgcggcgcagagggcctgcccgagatccgccaggcg
tacgagttcaccctggaccggctggggcaggacagcgcgtgcggcggcatctggattgat
tacatcgccttcctgcaggcgaggcttggggggggtggctgtggggcgcccaagcagggc
agccccgagtatgcggctgtgtacggccaggcgctggaggggcaggatgagtctcagaag
gtggcggcggtgcggcgcgcctaccagcgcgccctgctggtgcccacctcgcagctggag
gggctgtggcgcgggtacgagggcttcgaggtgacgggcagcaacaagcagctggcgcgc
aggctgctggacgagtggcgcccgctgtaccaagcagcccgcggcctgctgcgggagcgc
gaggcacggctgggcgccatcaacctcaaggcgctggcgctgccgcccggccgcggcggc
gccacgcagcagcagcaggcggcgctgtggcgggagtacctggggtgggagcgcggcaac
ccgcagcgactggacccggctacccacgccgccagggtgtcgctggcatttgagcaggcg
ctcatggtgctcttccactaccccgacatctggctggagtttgcggggtggcaccagcag
cagggcggcggcggcggcggcgcagcggcggcggcggtgctggagaagggtcgcggcgcg
ctgcccaccgcgctggccctgcactttgcggccgcagacctgcaggagtctctgggcaat
gctgcgggcgccaaagcgatttatgaggagcttgtggaggggctgaggcctgcagaggag
gcagccgcggggggcgcagccccggcagcagcagccgcgtcgccggcagcgcctgcctcg
acggcgccagcagcgtcccccgcagccccgccagcagccttgccggcggccccgccggca
gcagccccgccagcgtcaccggccgcagcggcggctggagcgggcggcgagggtgcgcag
caggcgggcgagcctgcggcgacaggtgcagaacagcagcagcagcagcagcaggacggt
ggcggcgcgggggaggctcagttgaaagcagggccggaggaggccgcagcagcagacggc
gcggcgcagggcggcgaggcgccgccgccgccgccgccgccggctgcaccgcagcagcag
gcagaggtgaaggcggagccgggcacgaaggcggaggtgaaggcagagccggaccagcag
gctgcagaggctgccgcggcggcgccggcgccggcgccacctggcgtccagctggcgcct
gagcagggcacgctggcctgggtgcaatacatgcgcttcgccaaacgcaccggcggcatc
atggcggcgcgcaaggtgggctggcgctggctgggcgacattcccaacacccgcgccctg
tttgagcgcgcgctgacggcggcggccccccaggcggcggcccagctgtgggacgcctac
gtggcgtttgagtacgatgtgggcagcctggccgcagcggcggcggtggaggcgcggcgt
gccgcggcggcagaggcggcgcgcgaggcggcggccgccgcggccgccggcgccgcgctg
gacggcaaggcggcggcggcggcggcgcaggcggcggcgcaggcccagcaggcgccccag
cacgaggcgctgcacctggcactgctgaagtaccgcgtgcaggacctgtggccggcctcg
gaggggcagcgcgcgtacatggagcgcctgctggggcaggcgcccgcccccgagagcggc
gaggcgcgggctcgggagccggacagcggcagccggcgggaccgcggcgagcgggagcgg
ggcagcgagcgcggcgagccgcggcggggcggcgacggcgagcggtcgcggtgccgccgc
ggcggcgagcgcggcggccacgcgccgcgctccccgccgcgggatgccgagccgctgcgg
ctgagccgggagctggcgcagctgatgagccagctgccgccgccgcacgcactggagggg
cccatcccggatgtggagcgcctggtgcaggtcatcctgggcgctgacctgtcgccagat
ggcatcatcgcccacgaggtggccgcagcgcgcgagcgccgccgccagcgacgcctcgcg
gagcaaggtggcggcagcccggtggggctgggccctgccggcggcggctacgccggcccg
cccggcgcctcgggcgtgggccagaagcgcaaggcgctgcaggagtttgacagcggcagc
gagagcgaggaggaggagcgggggcacaacggcggcggcggcggcgcggcgcccggcggc
gcgacagacggcggcgcgcccgctgccggcggcctggacgtgtatcgcatgcgccgcaag
cagcagcgcggcccctga
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