KEGG   Chlorella variabilis: CHLNCDRAFT_138056
Entry
CHLNCDRAFT_138056 CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K14408  cleavage stimulation factor subunit 3
Organism
cvr  Chlorella variabilis
Pathway
cvr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CHLNCDRAFT_138056
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvr03019]
    CHLNCDRAFT_138056
Messenger RNA biogenesis [BR:cvr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     CHLNCDRAFT_138056
SSDB
Motif
Pfam: Suf HAT_PRP39_N HAT_PRP39_C HAT_Syf1_CNRKL1_N HAT_Syf1_CNRKL1_C
Other DBs
NCBI-GeneID: 17358668
NCBI-ProteinID: XP_005851274
JGI: ChlNC64A_1_138056
UniProt: E1Z556
LinkDB
Position
Unknown
AA seq 905 aa
MSSKDRIATLRKRVATDPYDAEAWEKLVSEADRARRGSERNAALTAVYEDLLNVFPTAAG
YWREYADHQMSCSDESVVKGVFSRCLLTCLSVDLWRSYLNFIKRLNEPRGAEGLPEIRQA
YEFTLDRLGQDSACGGIWIDYIAFLQARLGGGGCGAPKQGSPEYAAVYGQALEGQDESQK
VAAVRRAYQRALLVPTSQLEGLWRGYEGFEVTGSNKQLARRLLDEWRPLYQAARGLLRER
EARLGAINLKALALPPGRGGATQQQQAALWREYLGWERGNPQRLDPATHAARVSLAFEQA
LMVLFHYPDIWLEFAGWHQQQGGGGGGAAAAAVLEKGRGALPTALALHFAAADLQESLGN
AAGAKAIYEELVEGLRPAEEAAAGGAAPAAAAASPAAPASTAPAASPAAPPAALPAAPPA
AAPPASPAAAAAGAGGEGAQQAGEPAATGAEQQQQQQQDGGGAGEAQLKAGPEEAAAADG
AAQGGEAPPPPPPPAAPQQQAEVKAEPGTKAEVKAEPDQQAAEAAAAAPAPAPPGVQLAP
EQGTLAWVQYMRFAKRTGGIMAARKVGWRWLGDIPNTRALFERALTAAAPQAAAQLWDAY
VAFEYDVGSLAAAAAVEARRAAAAEAAREAAAAAAAGAALDGKAAAAAAQAAAQAQQAPQ
HEALHLALLKYRVQDLWPASEGQRAYMERLLGQAPAPESGEARAREPDSGSRRDRGERER
GSERGEPRRGGDGERSRCRRGGERGGHAPRSPPRDAEPLRLSRELAQLMSQLPPPHALEG
PIPDVERLVQVILGADLSPDGIIAHEVAAARERRRQRRLAEQGGGSPVGLGPAGGGYAGP
PGASGVGQKRKALQEFDSGSESEEEERGHNGGGGGAAPGGATDGGAPAAGGLDVYRMRRK
QQRGP
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgagcagcaaggaccgcatagcaacgctgcgcaagcgtgttgcaacggacccctatgat
gcggaggcctgggagaagcttgtctcagaggccgaccgcgctcggcgcggctctgaacgc
aacgcggcgctgacagcggtgtacgaggacctgctgaatgtgttcccaacggcggcgggg
tactggcgggagtatgcagaccaccagatgagctgcagcgacgagagcgtggtgaagggc
gtcttctcccgctgcctgctcacctgcctgtctgtggacctctggcgctcctatctcaac
ttcatcaagcggctcaacgagccgcgcggcgcagagggcctgcccgagatccgccaggcg
tacgagttcaccctggaccggctggggcaggacagcgcgtgcggcggcatctggattgat
tacatcgccttcctgcaggcgaggcttggggggggtggctgtggggcgcccaagcagggc
agccccgagtatgcggctgtgtacggccaggcgctggaggggcaggatgagtctcagaag
gtggcggcggtgcggcgcgcctaccagcgcgccctgctggtgcccacctcgcagctggag
gggctgtggcgcgggtacgagggcttcgaggtgacgggcagcaacaagcagctggcgcgc
aggctgctggacgagtggcgcccgctgtaccaagcagcccgcggcctgctgcgggagcgc
gaggcacggctgggcgccatcaacctcaaggcgctggcgctgccgcccggccgcggcggc
gccacgcagcagcagcaggcggcgctgtggcgggagtacctggggtgggagcgcggcaac
ccgcagcgactggacccggctacccacgccgccagggtgtcgctggcatttgagcaggcg
ctcatggtgctcttccactaccccgacatctggctggagtttgcggggtggcaccagcag
cagggcggcggcggcggcggcgcagcggcggcggcggtgctggagaagggtcgcggcgcg
ctgcccaccgcgctggccctgcactttgcggccgcagacctgcaggagtctctgggcaat
gctgcgggcgccaaagcgatttatgaggagcttgtggaggggctgaggcctgcagaggag
gcagccgcggggggcgcagccccggcagcagcagccgcgtcgccggcagcgcctgcctcg
acggcgccagcagcgtcccccgcagccccgccagcagccttgccggcggccccgccggca
gcagccccgccagcgtcaccggccgcagcggcggctggagcgggcggcgagggtgcgcag
caggcgggcgagcctgcggcgacaggtgcagaacagcagcagcagcagcagcaggacggt
ggcggcgcgggggaggctcagttgaaagcagggccggaggaggccgcagcagcagacggc
gcggcgcagggcggcgaggcgccgccgccgccgccgccgccggctgcaccgcagcagcag
gcagaggtgaaggcggagccgggcacgaaggcggaggtgaaggcagagccggaccagcag
gctgcagaggctgccgcggcggcgccggcgccggcgccacctggcgtccagctggcgcct
gagcagggcacgctggcctgggtgcaatacatgcgcttcgccaaacgcaccggcggcatc
atggcggcgcgcaaggtgggctggcgctggctgggcgacattcccaacacccgcgccctg
tttgagcgcgcgctgacggcggcggccccccaggcggcggcccagctgtgggacgcctac
gtggcgtttgagtacgatgtgggcagcctggccgcagcggcggcggtggaggcgcggcgt
gccgcggcggcagaggcggcgcgcgaggcggcggccgccgcggccgccggcgccgcgctg
gacggcaaggcggcggcggcggcggcgcaggcggcggcgcaggcccagcaggcgccccag
cacgaggcgctgcacctggcactgctgaagtaccgcgtgcaggacctgtggccggcctcg
gaggggcagcgcgcgtacatggagcgcctgctggggcaggcgcccgcccccgagagcggc
gaggcgcgggctcgggagccggacagcggcagccggcgggaccgcggcgagcgggagcgg
ggcagcgagcgcggcgagccgcggcggggcggcgacggcgagcggtcgcggtgccgccgc
ggcggcgagcgcggcggccacgcgccgcgctccccgccgcgggatgccgagccgctgcgg
ctgagccgggagctggcgcagctgatgagccagctgccgccgccgcacgcactggagggg
cccatcccggatgtggagcgcctggtgcaggtcatcctgggcgctgacctgtcgccagat
ggcatcatcgcccacgaggtggccgcagcgcgcgagcgccgccgccagcgacgcctcgcg
gagcaaggtggcggcagcccggtggggctgggccctgccggcggcggctacgccggcccg
cccggcgcctcgggcgtgggccagaagcgcaaggcgctgcaggagtttgacagcggcagc
gagagcgaggaggaggagcgggggcacaacggcggcggcggcggcgcggcgcccggcggc
gcgacagacggcggcgcgcccgctgccggcggcctggacgtgtatcgcatgcgccgcaag
cagcagcgcggcccctga

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