Chlorella variabilis: CHLNCDRAFT_138525
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Entry
CHLNCDRAFT_138525 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
cvr
Chlorella variabilis
Pathway
cvr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHLNCDRAFT_138525
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cvr01002
]
CHLNCDRAFT_138525
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvr03021
]
CHLNCDRAFT_138525
03036 Chromosome and associated proteins [BR:
cvr03036
]
CHLNCDRAFT_138525
Peptidases and inhibitors [BR:
cvr01002
]
Metallo peptidases
Family M1
CHLNCDRAFT_138525
Transcription machinery [BR:
cvr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CHLNCDRAFT_138525
Coactivators
SAGA/TFTC/STAGA complex
CHLNCDRAFT_138525
Chromosome and associated proteins [BR:
cvr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
CHLNCDRAFT_138525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DFP
Peptidase_M1_N
Peptidase_M1
Motif
Other DBs
NCBI-GeneID:
17352100
NCBI-ProteinID:
XP_005844653
JGI:
ChlNC64A_1_138525
UniProt:
E1ZN79
LinkDB
All DBs
Position
Unknown
AA seq
1744 aa
AA seq
DB search
MAEEYSAERFLEEAPASGKEVASRVKAWIAAHHHEEVPDTTAAAAAAPGSEPPRLRRPLA
VVTSGGTTVPLERNCAGYAVIFLSRHGSAQPFVSEFQEELGAETLADLFELRGDGGLHVR
SAQQARMAAAVARVQQVMAEGRYLHLPYTTLFEYLAYLHALALALAPYGPSVLFYLAAAV
SDFFMPWADMAEHKIQSADGPLTLTLKKVPKMLGTLRLRWCPAAMLVSFKLETDEQILLR
KAYGAVEAHGVQLVVANELHSRKDRVWLVQQAAADQGGGMAVHKIERPPHVAVIETLLVG
RWWAATGGSWRRRRRRHRSGSSTGKESSSSGLWARSQRAAIRVDTEGAKFEGWTELRVAA
PAATSGGATGGSLGLHCYGLAVHSVSINGEPTSFELLPPVREELPEGVAAAAYDSPQRQL
AAVAEASFYLYERQLQRERLPELSIQLPAQPQWQQQQGQEQAADGPGSGSKKGELCIRVE
YSGGSGGGTTSGLHFWRRYACTDNQVRRASAWLPCVDTPSAAVSFQLDLTCRAEEMAVGP
GQLLRQSWADGGRQWRTFHYSVPISCAPCHLGFAVGEFRVVAEAAPAGKKGGGASNGAAN
GAANGAANGTADNGKSKTGAPSAHDPKQLTHFAPHELPPELVVAAVLAVPPAVTTDEPEV
PSAAAAAADGLARAAHFFTLAYSLFEEVLGARCPLPAMQQVFLPPELLLSEGQSLAGLQL
LGTGQLIQARAIEQSIAARGAIARGLARQWFGVLLRAATPLDEWLVEGLAGWLEEQCLRK
FLGRNELAYKRWRDRQAVFLADNGEAAPLAARCAAPPVAMQGPATAVVAMLERRAGEELF
RKHVGDVVAGAIAAVQAEQAAVAGTASGAAGPSQSPAARPSPAAGAGSFRKEMGPFAVRW
VYGRGVPHITAAYIHHSRVSALELAVKQAGPESAKRAADAAERAAVAGGSNAGIIKAVVR
EGEPPTSTDHPVHLGGEAFVLTELKVTPVVEKKQPGRRKRKVEGVEVDEAPKTIVATPEE
PVLWVRLDPACELLCDIRLMQPERCLAAQLLQSRDVVAQAEAIQRLAELRVHSAATWRQQ
PGVDALRRTLADRAAFYRVRCDAALALAGLRDEQGQAAGLPLLLDFYRSHYFLPGSEVPR
SIAIADPSEYFVAQAVATAVSLCREPDGSTPIDVVLFLSTCLNEYVSVPGAPFSDYGLVA
ALCASLGNVQFEGFGDSLLTLLEKFLERDSVLVSPGSAVGCACLSTMAALCANGTCSEEE
QARVALVVRRVRQSPGLPVAARHAALAAALDLAAAQRGPAAALQLAVAAAEAAQAAEGPE
AAAAAPPLLLPSASTPALLLEEAAQLMVAATEAAAGAAAASELFGGAEGGGGAAAAVDIP
MPLLRRLAALLSAGRDCRARHLAFVVLQLLAVQPPTLYRPPPVEAEEDAAAFIASGAAAA
AAAGQAVSLGGATHRTGGQHPSAGAAAVAAAPKIRLHLGGGAAGGGARSVALSGGVSGPE
LSGEGPAVSDACVLSLGAVEQQAPQREQQQGVPPEARGQLFSPVRGAGGLVAAVPFGTAL
GGEAGQEAASQQQQQAAFAGGEPFVAPQPQPQPAGPAAAPAAPKLRFKMPAPAAAQQQEQ
QQEQPAPAPAGRKRRATPPAAAQQQAPPPAAQPSWWQRAAFPDLQQQPSGAPLAAPPPDG
SAPPVPYAASGWDAAAGAWGAGAPGGGAGAGLPQPLPAQQQQPPQQAPPKTKFKLKVKMP
MPPQ
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagagtacagcgcggagcgcttcctggaagaggcacccgccagcgggaaggag
gtggcgtcaagggtgaaggcctggatcgctgcacaccaccacgaggaggtccccgacacc
accgccgccgctgccgccgctccaggcagcgagccgccccgcctgcgccgcccactcgcc
gtcgtcaccagcggcggcaccacggtgccgctggagcgcaactgcgcggggtatgccgtc
atcttcctgagccgccacggatccgcgcagccctttgtgtcagagtttcaggaggagctg
ggtgcggagacgctggccgacctgtttgagctgcgcggcgacggcggcctgcacgtgcgc
agtgcgcagcaggcacgcatggcggcggcggtggcgcgggtgcagcaagtgatggcggag
gggcgctacctgcaccttccctacaccacgctcttcgagtacctcgcttatctgcatgcc
ctggcgctggccctggccccctacggcccctctgtgctcttctacctcgccgctgccgtc
tccgacttcttcatgccctgggccgacatggcggagcacaagattcagtcggctgacggg
cccctcacgctcacgctgaaaaaggttcccaagatgctgggcacgctgcggctgcgctgg
tgccccgccgccatgctggtcagcttcaagctggagacggacgaacagatactgctgcgc
aaggcgtacggcgcggtggaggcgcatggcgtgcagctggtggtggccaacgagctgcac
tctcgcaaggacagggtgtggctggtgcagcaggcggcggcggaccagggcggcggcatg
gcggtgcacaagattgagcggccaccgcatgtggctgtgatcgagacgctgctggtgggg
aggtggtgggcagccaccggcggttcatggcggcggcggcggcggcggcatcgcagcggc
agcagcaccggcaaggagagcagcagcagcggcctgtgggctagatcgcagcgtgctgcc
atccgggtggacaccgagggcgccaagttcgagggatggacggagctgcgtgtggcggcc
cccgccgccacctctggcggcgccaccggcggcagcctgggcctgcactgctatggcctg
gctgttcactctgtgtcgatcaacggcgagccgaccagctttgagctgctgccgcccgtc
agggaggagctgccagagggggtcgctgccgcggcctacgacagcccccagcgccagctg
gcggcggtggcagaggcttctttctacctgtacgagcgccagctgcagcgcgagcgcctg
ccggaactgtccatccagctgccagcccagccgcagtggcagcagcagcaggggcaggag
caggccgccgatggtccgggcagcggcagcaaaaagggggagctgtgcatccgcgtggag
tatagcggcggcagcggcggcggcaccacctcggggctgcacttctggcgccgctacgca
tgcaccgacaaccaggtgcgccgggccagcgcctggctgccatgcgtggacacgccctct
gcggcggtttctttccagctggacctcacctgccgcgccgaggagatggcggtggggccg
ggccagctgctgcgccagagctgggccgacggcggcaggcagtggcgcacctttcactac
tctgtgcccatcagctgcgcgccctgccacctgggctttgcggtcggcgagttccgggtg
gtggcggaggcggcgcctgcgggcaagaagggcgggggcgcgtccaacggcgccgccaac
ggcgccgccaacggcgccgcgaatggtaccgccgacaatggcaagtccaagacaggcgca
ccgtcggcgcatgacccgaagcagctcacccactttgcgccgcacgagctgcctcccgag
ctggttgttgcggcggtgctggcggtaccgccggcggtaacgacggacgagccggaggtg
ccgtccgcggcggcagcggcggcagacggcctggcccgcgccgcccacttcttcaccctc
gcctactctctgtttgaggaggtgctgggggcgcgctgcccgctgcccgccatgcagcag
gtcttcctgccccccgagctgctgctgagcgagggccagtcgctggcggggctgcagctg
ctgggcaccgggcagctcatccaggccagagccatcgagcagtccattgcggcgcgcggc
gccatcgctcgcggcctggcgcggcagtggtttggggtgctgctgcgggcggccacccca
ctagacgagtggctggtggaagggctggctggctggctggaggagcagtgcctgcgcaag
ttcctgggcaggaacgagctggcatacaagcgctggcgggacaggcaggcagtcttcctg
gccgacaacggcgaggcggcgccgctggcggcccggtgcgccgcgccgccagttgccatg
caggggcctgccaccgccgtcgtcgccatgctggagcggcgggctggcgaggaactgttt
cgcaagcacgtgggggatgtggtggctggggccatagccgcggtgcaggcggagcaggcg
gcagtagcgggcaccgccagcggcgccgcggggccgtcgcagtcgcctgctgcaagaccg
tcgcctgctgcgggggcgggctccttccgaaaggagatgggcccctttgccgtgcgctgg
gtgtacgggcgcggcgtgccgcacatcaccgcagcctacatccaccacagccgcgtgtct
gcgctggaacttgccgtgaagcaggcggggccggagagcgccaagcgggcggccgatgca
gcggagcgtgccgccgtggcgggcggcagcaacgcggggatcatcaaggctgtggtgcgc
gagggcgagccgcccacctccacagaccaccctgtccacctgggtggcgaggcatttgta
ctgacagagctcaaggtcacgccggtggtggagaagaagcagcccggaaggcgaaagcgt
aaggtggaaggcgtggaagttgatgaggcgcccaagaccatcgtcgccaccccagaggag
cctgtgctgtgggtgcggctggaccctgcctgcgagctgctgtgcgatatacggctgatg
cagcccgagcgctgcctggcggcgcagctgctgcagtcgcgggacgtggtggcgcaggcg
gaggcgatccagcgcctggccgagctgcgggtccactccgccgccacctggcgccagcag
ccgggggtggatgccctgcgccgcacgctggcagaccgggctgccttctacagagtgcgg
tgcgatgcggcgctggcactggcggggctgcgggatgaacagggacaggctgcaggcctc
cccctgctcctcgacttctaccgctcccactacttcctgcccgggtcggaggtgcctcgc
tccatcgccatcgccgacccctcagagtactttgtggcgcaggcggtggccacggcggtg
tccctgtgccgcgagcccgacggctccacccccatcgacgtcgtcctcttcctctccacc
tgcctcaacgaatacgtgtcggtgccgggggcccccttcagcgactatgggctggtggcc
gcgctgtgcgcctccctgggcaacgtgcagttcgaggggtttggcgactccctgctgact
ctgctggagaagtttctggagcgggactcggtgctggtgtccccgggcagcgccgtgggc
tgcgcctgcctgtcgaccatggcggcgctatgcgccaacgggacgtgcagcgaggaggag
caagcacgggtggcgctggtggtgcgccgcgtgcgccagtcgcccggcctgcctgtggcg
gcgcggcacgcggccctggctgcagcgctggacctggccgccgcgcagcgcgggcccgcg
gcggccctgcagctggcggtggcggcggcagaggcagcacaggcggcagaggggcccgag
gcagcggcggcggcgccgccgctgctgctgccttcggcctccaccccagcccttctgctg
gaggaggcagcgcagctgatggtggcagccacagaagctgcggcgggtgccgccgccgcc
agcgagctctttggcggggcagagggcggcggcggtgccgccgctgccgtagacatcccc
atgccgctgctgcggcgcctggcggcgctgctgagcgctgggcgggactgccgggcacgt
cacctggcgtttgtggtactgcagctgctggcggtacagccccccacgctgtaccgcccg
ccgccggtggaggcggaggaggatgccgccgcgttcatcgcctctggcgcggccgcggcg
gcggcagcggggcaggctgtcagcctgggcggcgccacccaccgcaccggcgggcagcac
ccctcggcaggcgcagcagcggttgcggcagcccccaagatccgcctgcacctgggcggc
ggcgcggcgggtggcggcgcgcgcagcgtcgcgctcagcggcggcgtcagcggtccggag
ctgtctggggaaggccccgccgtcagcgacgcctgcgtgctgtcgttgggtgcggtggag
cagcaggcgccgcagcgggagcagcagcagggagtgccgccagaggcgcgcggccagctg
ttctcccctgtgcggggcgctggtggcctggtggcggccgttccttttggcacggcgttg
gggggggaggcaggccaggaggccgccagccagcagcagcagcaggcggcctttgcaggt
ggcgaaccctttgtggcgcctcagccgcagccgcagcccgcagggccagcagccgcgcct
gccgcgcccaagctgcgtttcaagatgccggcgccagcggcggcgcagcagcaggagcag
cagcaggagcagcccgctcctgcgccggcgggcaggaagcgcagggcgacgccgccggcg
gctgcccagcagcaggcgccgccgccggctgcccagccgtcgtggtggcagcgggcggcc
ttccctgacctgcagcagcagccaagcggagcccccttggccgcccctccgccagacggc
agtgccccgccagtgccctatgcagcatcgggatgggacgcagccgcaggggcgtggggg
gcaggcgcgccaggaggtggggccggggcggggctgccgcagccgctgcccgcgcagcag
cagcagccgccgcagcaggcgccccccaagaccaaattcaagctgaaggtcaaaatgccg
atgcctccgcagtga
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