Chlorella variabilis: CHLNCDRAFT_139847
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Entry
CHLNCDRAFT_139847 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cvr
Chlorella variabilis
Pathway
cvr03022
Basal transcription factors
cvr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHLNCDRAFT_139847
09124 Replication and repair
03420 Nucleotide excision repair
CHLNCDRAFT_139847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvr03021
]
CHLNCDRAFT_139847
03400 DNA repair and recombination proteins [BR:
cvr03400
]
CHLNCDRAFT_139847
Transcription machinery [BR:
cvr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CHLNCDRAFT_139847
DNA repair and recombination proteins [BR:
cvr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CHLNCDRAFT_139847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
PepX_N
Motif
Other DBs
NCBI-GeneID:
17351150
NCBI-ProteinID:
XP_005843756
JGI:
ChlNC64A_1_139847
UniProt:
E1ZR22
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MAESSDPVIFTKKAQRGTGANAVDGVCMISRTKVKWEPSDPSKAQPTVIEISSITRTQQA
PGKPFIKLETAAGPLILAFQQVADRDDAVELLRQAKPAAAPKAAAAAAGSGGEKLLLPTP
QQAAALFRADNDLESVYKSLVVAGILGEQEFWRTRQGQLRDALARGGGGGGGGASRRQRV
GLPSAMLADVKPSADGQTEKVHFSLTPQIIQQASASWHQLAAAARAGMACQLGRVLMRPS
GRLIFSERPEVHRAYLAHVPHSMDEKAFWTLYFQQQYKRMARRRRQGLMGDGGDDDDDEL
FAPFKRQLQEQEAVRAKQAVSRVDPTVNLAADAGERFAGGFGSLRDGASDPAAAVRGAAR
DSIARDINRHAAVVLDGAPEALPDADGGGGGGGAHGEQQQQVETGRIAAALVAQQKAAAA
KAAAAPRQAGDGSVSPERLQQWQERAASALEDLALDERDKQFAPLNIQDPRAYFDAGAAA
GGAEGKQQQAEPGATAASGTAAAAAEAGARGSGGLLLAALAAIQPAALPDPPCDPDLASA
VLLEVSQDQDEELVREFGPVAAAALRVPPHDRTQGLQELLLEHLRAEALKTNELLRHFWG
CMPLTSAAKAAKAAKLSQHLAEQRTLLASHMRHHAGSSHQVYVTMMLRPLSAAIDAALAR
HQQELEQQRQRQQKL
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtcctcagacccggtgatcttcaccaagaaggcccagcggggcacgggtgca
aatgcggtggacggagtctgcatgatcagccggacgaaggtcaagtgggagcccagcgac
ccttcgaaggcgcagccgacggtgattgagatcagctccatcactaggacgcagcaggca
cccggcaagcccttcatcaagctcgagacggcggcagggcccctcattctggccttccag
caagtggcagaccgcgacgatgccgtggagctgctgcggcaggccaagccggcagcggcg
cccaaggcagcggccgcagcagcaggcagcggcggcgagaagctgctgctgcccacgccg
cagcaggcggcggcgctgttccgggcagacaacgacttggagtctgtctacaagtcgcta
gtggtggcaggcatcctaggggagcaggagttctggcgcacgcggcaggggcagctgagg
gatgccctggcacgcggcggcggcggcggcggcgggggcgcaagccgtcgccagcgggtc
ggcctgcccagcgccatgctggcagacgtcaagcccagcgcggatgggcagacagagaag
gtccacttctcgctcacgccgcagatcatccagcaggcgagcgccagctggcaccagctg
gcagcggccgcacgtgctggcatggcttgccagcttggccgcgtgctcatgcgccccagc
gggcgcctgatatttagcgaacggcctgaagtgcaccgcgcctacctggcgcacgtgccg
cacagcatggatgagaaggccttctggacgctctacttccagcagcagtacaagcgcatg
gccaggcggcggcggcaggggctgatgggagatggcggcgacgacgacgacgatgagctg
tttgcgcccttcaagcggcagctgcaggagcaggaggcggtgcgagccaagcaggctgtc
tcgcgggtggaccccacagtcaacctggcggccgatgcgggcgagcgtttcgccggcggc
ttcggctcgctgcgagacggcgccagcgacccggcggctgcggtgcgcggcgcggcccgg
gactctatcgcgcgagacataaaccgccacgccgccgtggtgctggacggggcgcccgag
gcgctacccgacgcggacggcggcggcggcggcggcggcgcccacggcgagcagcagcag
caggtggagacgggccgcatcgctgcggcgctggtggcgcagcagaaggcggctgcggcc
aaggcggcggcggcgccccgccaggccggcgacggcagcgtgtctccggagcgcctgcag
cagtggcaggagcgggcggcgtcggcgctggaagacctggctctggatgagagggacaag
cagtttgctcccctcaatatccaagacccccgcgcttactttgacgccggagcagcagca
ggaggcgccgagggcaagcagcagcaggccgagccgggggcgacggcagcaagcgggaca
gcagcggccgctgccgaggccggcgctcgtggcagcggcggcctgctgctggctgcgctg
gcagccatccagcccgcggcgctgccagatcctccctgcgaccccgatctggcctccgcg
gtgcttctggaggtcagccaggaccaggatgaggagctggtgcgggagtttgggcccgtg
gcagccgccgcgctgcgcgtgccgccgcacgaccgcacacagggcctgcaggagctgctg
ctggagcacctgcgcgccgaggccctgaaaaccaacgagctgctgcgccacttctggggc
tgcatgccgctgaccagcgccgccaaggccgccaaggccgccaagctgtcgcagcacctg
gccgagcagcgtacgctgctggcctcgcacatgcggcaccacgcgggctcctcacaccag
gtctacgtgacaatgatgctccgcccgctgtcggcagccatagacgccgccctggcgcgg
caccagcaagagctggagcagcagcggcagcggcagcagaagttgtag
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integrated database retrieval system
