Chlorella variabilis: CHLNCDRAFT_140433
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Entry
CHLNCDRAFT_140433 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
cvr
Chlorella variabilis
Pathway
cvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHLNCDRAFT_140433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvr03019
]
CHLNCDRAFT_140433
Messenger RNA biogenesis [BR:
cvr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CHLNCDRAFT_140433
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
17357879
NCBI-ProteinID:
XP_005850551
JGI:
ChlNC64A_1_140433
UniProt:
E1Z712
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MCEALVLDLTVPAAKETALLELSKKRESFPELAPYLWHSFGTMAALLQEIVSIYPMLQPP
SLTAHASNRVCNALALLQCVASHPETRSLFLQAHIPLFLYPFLNTISKTRPFEYLRLTSL
GVIGALVKVDDTEVINFLLSTEIIPLCLRTMETGSELSKTVATFIVQKILLDGVGLSYIC
ATAERFFAVGAVLSSMVTGLAEQPSVRLLKHIIRCYLRLSDNPRAREALRQCLPDLLRNP
QFTACLKDDVTTRRWLAQLLVNVGHVGDAAALGTDVVGPTPPVQQVA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaggcgctggtcctcgacctgacggtgccggcggccaaggagacggcgctgctg
gagctgagcaagaagcgggagtcgttcccggagctggcgccctacctgtggcacagcttt
ggcacgatggcggcgctgctgcaggagattgtcagcatctaccccatgctgcagccgccg
tcgctcaccgcgcacgcctccaaccgcgtgtgcaacgcgctggcgctgctgcagtgcgtg
gcctcgcaccccgagacgcgcagcctcttcctgcaagcacacatcccgctcttcctgtac
cccttcctcaacaccatcagcaagacgcggccctttgagtacctgcggctcaccagcctg
ggggtcatcggagcgctggtcaaggtggacgacaccgaggtcatcaacttcctgctgtcc
accgagatcatcccgctgtgcctgcgcaccatggagacgggcagcgagctgtccaagacg
gtggccaccttcatcgtgcagaagatcctgctggacggcgtgggcctctcctacatctgc
gccaccgccgagcgcttcttcgccgtgggagccgtgctgagcagcatggtgacgggcctg
gcggagcagcccagcgtgcgcctgctcaagcacatcatccgctgctacctgcgcctgagc
gacaacccgcgtgcccgcgaggcgctgcgccagtgcctgcccgacctgctgcgcaaccct
cagttcactgcgtgcctcaaggacgatgtgacgacgcggcgctggctggcgcagctgctg
gtcaacgtggggcacgtgggcgatgcggcggcgctgggcacagacgtggtggggcccacc
ccgcccgtgcagcaggtggcgtga
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