Chlorella variabilis: CHLNCDRAFT_140463
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Entry
CHLNCDRAFT_140463 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
cvr
Chlorella variabilis
Pathway
cvr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CHLNCDRAFT_140463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvr03009
]
CHLNCDRAFT_140463
Ribosome biogenesis [BR:
cvr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CHLNCDRAFT_140463
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D3
Nrap
Nrap_D4
Nrap_D2
Nrap_D6
TetR_C_46
Motif
Other DBs
NCBI-GeneID:
17358073
NCBI-ProteinID:
XP_005850856
JGI:
ChlNC64A_1_140463
UniProt:
E1Z5F8
LinkDB
All DBs
Position
Unknown
AA seq
1326 aa
AA seq
DB search
MGGDSDDEVGSGSESSGGFLSPSEGEDSGSEAEEPQPQAKKRRVDGSESLGLELVTGALH
HGGCGAPAATAAHIDASEEAAASLMQLEVEELLKEARPDHGLEAALLELVRSLAALLRAL
PDAEVAPDAREAAAVRGFLSDLAFQPVVSRRPFVFRAPTRVQVVGSFGLRAALRPSPCLD
LSLLMPAACFDSKDQLNHRYFAKRALYLAHVAAALRGHPQLSGVGWECLADDPRRPALVL
HPRQTPGGFCIRLLPAAPPELCPLPRLAPDRNNLRTAVAPPAPAPAAPPAAAAAPAAAAA
AADGQVGGVAGKAGKGGKGGKAAKGAKGGKQPQQPNGKGKVAVAAEAPAQPAEPRLLPTP
HYNTSVLQDLLMMPLAEECRVAAASCPHFADAAALLRVWARQQQLSQSADGLGGCVLTLL
LVHLVQGGQATASMSAMHLFRAVLVTLSRPRTFTPGLFMQRRVPASAGAVPPEAKAWRRA
FEVVFVDSSGWLNLAAAVSRSALAQARGAASRSLQLLSGGAPEAFGAVFLARQQRAALCD
YWFHVALPGGAAAAGSGGSGGGGCQDLQQDQPAWRSVEQRVEALAAKALGTRARLVRAFR
RTLQQQAAGSGAAPFRSGAARPEQRHVLLGVQVDATAALRSIDLGPPADKVEAARAFRAF
WGDKAELRRFQDGAIAEALMWEGDAAHRHLVVDSMVSYILRRHLPAGASVACHAGVLDAA
LRRKHSTPEADVAAARLCEAAAERLGKRLRSLASDSLPLRVVAVQALAPVLRHAAAFPPL
PQLLTGAAADTLVGDHVARCLQPVELLCQLEGSGKWPDSPEAFHKMKAAMGCQLAQQLHS
ALGMHAAAAEGWVDVLSDGFAFRLLLATERDAAMQQKALQLGGGQRVAAEEDMPLRTWHQ
GAISGVAGENPAFEPAARLAKRWVGAHLLSPHLGEEAVELLLAHCFTAGGRPAGGGGGGG
GTTAVAAAPAPASRLSGLLRFLQLLADHPWRVQPLIVDPNGELSVAQRDAIVRQHAAARA
ASAAPALCLPTPRDAAGGAWTAGRPGAQVLHRIAVLAHRSAAALEALLLGDGAASPAAAA
DGGGAAAQEAAAAAQAAAAQAVFSRDLGEYDVLIRLRPDSLPNAANDLRLGRASGSGGPG
GGGGSSGRRPPLGPALQAANEQLSAAAAAAAAAPGSKHCRAILKGIPQSVLAARGHHAVR
RELLVGFDPLPLYTQLLQRRLGHLAVACADYVGGGVVALKWRAAAFAAAPLRPEEAHLVC
PTGSAEAGPAEELAGRWQAASGEAGTANGRSPHGEPSAAAVVPDVVGVLRDALSLGAGLV
ESVQLQ
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgactccgatgacgaagtgggcagcggcagcgagagcagcggcggcttcctc
agcccctctgaaggcgaggacagcggcagcgaggccgaggagccccagccgcaagccaag
aaacggcgcgtggatggcagcgagtcgctgggcctggagctggtgacgggcgcgctgcac
cacggcggctgcggggcgcctgctgccacggcggcccacattgacgccagcgaggaggcg
gcggccagcctgatgcagctggaggttgaggagctgctgaaggaggcacgccctgaccac
gggctggaggcagcgctgctggagctggtgcggtcgctggcggcgctgctgcgcgcgctg
cccgacgccgaggtggcgccggatgcgcgggaggccgccgccgtccgcggcttcctgtcg
gatctcgccttccagccggtggtgagccggcgcccgtttgtgttccgcgcccccacccgc
gtgcaagtggtgggcagctttgggctgcgcgccgcgctgcgcccctcgccctgcctggac
ctttcgctgctcatgcccgccgcctgcttcgacagcaaggaccagctcaaccacaggtac
tttgccaagcgggcgctctacctggcgcacgtggcggcggcgctgcggggccacccgcag
ctgagcggcgtagggtgggagtgcctggccgacgaccctcgccgcccagccctggtgctg
cacccgcggcagacaccgggcggcttctgcatccgcctgctgccggcggcgccgccggag
ctgtgcccgctgccgcgcctggcgccagaccgcaacaacctgcgcacggcggtggcgccg
ccggcgccggcgccagctgccccgcccgcggcggcggcggcgccggcggcagcagcagca
gcagcagacggccaggtcggcggcgtggccggcaaagcaggcaagggtggcaagggcggc
aaggcggccaagggtgccaagggaggcaagcagccgcagcagcccaacgggaaggggaag
gtggcggtggcagcagaggcgccggcgcagccggcggagccgcggctgctgcccacgccg
cactacaacacctcggtactgcaggacctgctgatgatgccgctggcggaggagtgccgg
gtcgccgccgccagctgcccccactttgcggacgcggcggcgctgctgcgggtgtgggcg
cggcagcagcagctgagccagagcgccgacgggctcggcggctgcgtgctgaccctgctg
ctggtgcacctggtgcagggcgggcaggcgactgcctccatgtctgccatgcacctcttc
cgtgcggtgctggtgaccctgtccaggccccgcaccttcaccccaggcctcttcatgcag
cgccgcgtgcccgccagcgccggcgccgtccccccggaggccaaggcctggcggcgggcc
tttgaggtggtgtttgtggactcctccggctggctcaacctggcggcggcggtgtccagg
tcggcgctggcgcaggcgcggggcgccgccagccgcagcctgcagctgctcagcggcggc
gcccccgaggcctttggcgccgtgttcctggcgcggcagcagcgcgccgcgctctgcgac
tactggttccatgtggcgctgcccggcggggcggcggcggcgggcagcggcggcagcggc
ggcggcggctgccaggacctgcagcaggaccagcccgcctggcggtctgtggagcagcgg
gtggaggcgctggcggccaaagcgctgggcacccgcgcgcgcctcgtgcgagccttccgc
cgcaccctgcagcagcaggcggcgggcagcggcgcggcgccgtttaggagcggcgcggcg
cggccggagcagcggcacgtgctgctcggggtgcaggtggatgccaccgcagcgcttcgc
tccatcgacctcgggccgcccgcagacaaggtggaggcggcgcgcgccttccgcgccttt
tggggcgacaaggccgagctgcggcgcttccaggacggagccatcgccgaggcgctgatg
tgggagggggatgccgcgcaccgacacctcgtagtggacagcatggtcagctacatcctg
cgccgccacctgccagctggcgccagcgtggcctgccacgcgggcgtgctggatgcggcg
ctgcgccgcaagcacagcactcccgaggcggacgttgcggcggcgcgcctgtgcgaggcg
gcggcggagcggctgggcaagcggctgcgcagcctcgcctccgactcgctgccactgcgg
gtggtggcggtgcaggcgctggcgccggtgctgcgccacgcggccgccttcccgccgctg
ccgcagctgctgacgggggctgccgccgacacgctggtcggcgaccacgtggctcgatgc
ctgcagcctgtggagctgctgtgccagctggagggctcaggcaagtggcccgacagcccg
gaggctttccacaagatgaaggcggccatggggtgccagctggcgcagcagctgcacagc
gcgctgggcatgcacgcggcggcggccgagggctgggtggatgtgctgtccgatggcttt
gccttccgcctgctgctggccaccgagcgcgacgcggcgatgcagcagaaggcgctgcag
ctgggcggagggcagcgggtggctgccgaggaggacatgccgctgcgcacctggcaccag
ggcgccatctcgggcgtggctggagagaacccggcctttgagccggcggcgcggctggcc
aagcgctgggtgggcgcccacctgctgagcccccacctgggggaggaggcggtggagctg
ctgctggcgcactgcttcacggcgggagggcggcccgcgggcggcggcggcggcggcggc
ggcacgaccgcggtggcggccgcgccggcccccgcctcgcgcctctccggcctgctccgt
ttcctgcagctactagccgaccacccgtggcgcgtgcagccgctgattgtggaccccaac
ggagagctcagcgtggcgcagcgtgacgccatcgtgcggcagcacgccgccgcgcgcgcc
gccagcgccgcccccgcgctgtgcctccccacgccccgcgacgccgccggcggcgcctgg
accgccggccgccccggcgcgcaggtgctgcaccgcatcgcagtgctggcccaccgctcg
gcggcagccctggaagcgctcctgctgggcgacggcgccgcctcgccagcggcggcggcc
gacggtggcggagcagcggcccaggaggcggcagcagctgcccaggcggctgccgcgcag
gctgtgttcagtcgggacctgggcgagtatgatgtcctcatccgcctgaggcctgactcg
ctgcccaatgccgccaacgacctgcgcctaggcagggccagcggcagcggtggccccggc
ggcggcggcggcagcagcggccgtcggccgccactggggcccgcgctgcaggcggcgaac
gagcagctgtcggcggccgcggcggccgcggcggccgcgccgggcagcaagcactgccga
gcgatactgaagggcatcccgcagagcgtgctggctgcgcggggccaccacgctgtgcgg
cgcgagctgctggtgggcttcgacccgctgccgctctacacacagctcctgcagcgccgc
ctgggccatctggccgtggcctgcgcagactacgtcggcggcggcgtggtggcgctcaag
tggcgcgcagccgcgtttgccgccgccccgctgcgtcccgaggaagcgcacctggtgtgc
cctaccggcagcgccgaggcgggtccagccgaggagctggcgggccggtggcaggctgcg
agtggggaggcaggcactgccaacggcaggagcccccacggcgagccgagtgcggcggcg
gtggtgccggatgtggtgggggtgctgcgggatgctctgagcctgggggcgggcctggtg
gagtcggtgcagctgcagtga
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