Chlorella variabilis: CHLNCDRAFT_140589
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Entry
CHLNCDRAFT_140589 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cvr
Chlorella variabilis
Pathway
cvr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CHLNCDRAFT_140589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvr03019
]
CHLNCDRAFT_140589
03009 Ribosome biogenesis [BR:
cvr03009
]
CHLNCDRAFT_140589
04131 Membrane trafficking [BR:
cvr04131
]
CHLNCDRAFT_140589
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvr04147
]
CHLNCDRAFT_140589
Messenger RNA biogenesis [BR:
cvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CHLNCDRAFT_140589
Ribosome biogenesis [BR:
cvr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CHLNCDRAFT_140589
Membrane trafficking [BR:
cvr04131
]
SNARE
SNARE associated proteins
Others
CHLNCDRAFT_140589
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CHLNCDRAFT_140589
Exosome [BR:
cvr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CHLNCDRAFT_140589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_2
AAA_33
AAA_14
AAA_22
TIP49
NPHP3_N
RNA_helicase
Mg_chelatase
AAA_17
AAA_28
nSTAND3
Parvo_NS1
AAA_18
IstB_IS21
Vps4_C
ATPase_2
AAA_7
AAA_24
Viral_helicase1
ABC_tran
NB-ARC
TsaE
DUF815
ResIII
NACHT
Zeta_toxin
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
17358217
NCBI-ProteinID:
XP_005850901
JGI:
ChlNC64A_1_140589
UniProt:
E1Z5R3
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
MSDPAEAPSGSQQPAGADHKKDFSTAILERKKSPNRLVVDDAVNQDDNSVVTLNPKTMET
LELFRGDTVLLKGKKRKDTVCIVLADDTVEEAKIRMNKVVRKNLRVRLGDIVSVHQCPDV
KYGKRIHVLPFEDTIEGISGNLFDAFLKPYFQEAYRPVRKGDTFLVRGGMRTVEFKVVET
DPAEYCIVAPDTEIYCEGEPIRREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQL
FKTIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA
FEEAEKNAPAIIFIDEIDSIAPKREKTQASEEAWGQGCGDGLERAKGEVERRIVSQLLTL
MDGLKSRSHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTRNMKLD
EDVDLEAISRDTHGYVGADLAALCTEAALQCIREKMDVIDLEDESIDAEVLNSMAVTMDH
FKTALGLSNPSALRETVVEVPNITWDDIGGLEGVKRELQETVQNPVEHPEKFEKYGMAPS
KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP
CVLFFDELDSIAVQRGSSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDP
ALMRPGRLDQLIYIPLPDDGSRRSIFKSALRKSPVAPDVDLDLLSKVTQGFSGADITEIC
QRAVKYAIRESIEKDIERNRRKQENEDLMDEDDTDPVPCITKAHFEESMKFARRSVSDAD
IRKYQAFAQTLQQSRGFGSDFRFPDAGGAAAAAPGAAAAPAAAAGTFASAGAADEEDDLY
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccctgccgaagctccatcggggagccagcagcccgctggagcagaccacaag
aaggacttctccacggccatcctggagcgcaagaagtcgcccaaccggctggtggtggat
gatgcggtgaaccaggatgacaactcagtggtgaccctcaatcccaagactatggagacg
ctggagctgttcaggggtgacaccgtgctcctcaagggcaagaagcgcaaggacacagtg
tgcattgtgctggccgatgacacggtggaggaggctaagatccgcatgaacaaggtggtg
cgcaagaacctgcgggtgcggctgggtgacattgtgagcgtgcaccagtgccctgacgtc
aagtacggcaagcgcatccacgtgctgccgtttgaggacaccattgagggcatcagcggc
aacctcttcgacgccttcctcaagccctacttccaggaggcctaccgcccagtgcgcaag
ggcgacaccttcctggtgcgcggcggcatgcgcaccgtggagttcaaggtggtggagacc
gaccccgctgagtattgcatcgtggcccccgacaccgagatctactgcgagggcgagccc
atccggcgcgaggatgaggagcggctggacgaggtgggctatgacgatgtgggcggcgtg
cgcaagcagatggcccagattcgggagctggtggagctgccgctgcgccaccctcagctg
ttcaaaaccatcggcgtcaagccgcccaaaggcatcctgctgtacgggccccccggctcc
ggcaagaccctgattgccagggcggtggccaacgagacaggcgctttcttcttcctcatc
aatggcccagaaatcatgtccaagctggcgggagagagcgagtccaacctgcgcaaggct
tttgaggaggctgagaagaatgcccccgccatcatcttcattgatgagattgactccatc
gcgcccaagcgcgagaagacgcaggcaagtgaagaggcgtggggacagggttgcggagat
gggctggagcgggccaaaggcgaggtggagcggcgcatcgtgtcgcagctgctgacgctg
atggacggcctcaagtcacgcagccacgtgattgtgatgggtgccaccaaccgccccaac
tctatcgacccagcactgcgccgctttggccgcttcgaccgcgagattgacattggcgtg
cccgacgagattgggcgcctggaggtgctgcgcatccacacccgcaacatgaagctggat
gaggatgtagatctggaggccatctcgcgagacacgcacggctatgtgggcgcagacctg
gccgcgctgtgcactgaggcggcgctgcagtgcatccgtgaaaagatggacgtgattgac
ctggaggatgagagcatcgatgcagaggtgctcaactccatggccgtcaccatggaccac
ttcaagactgcgctgggcctgtccaacccctctgcgctacgcgagactgtggtggaggtg
cccaacatcacgtgggacgacattggcggcctggagggcgtcaagcgcgagctgcaggag
acggtgcagaacccggtggagcaccccgagaagtttgagaagtatggcatggcgccctcc
aagggggtgctcttctacggcccgccaggctgcggcaagacgctgctggccaaggccatt
gccaacgagtgccaggccaacttcatcagcgtcaagggccccgagctgctgaccatgtgg
tttggcgagtcggaggcaaatgtgcgggagatcttcgacaaggcccgccagtccgcccct
tgcgtgctgttcttcgacgagctggattccatcgccgtgcagcgcggctcctccagcggc
gacgcgggcggcgccgccgaccgcgtgctcaaccagctgctgacggagatggatggcatg
aacgccaagaagacggtgttcatcatcggcgccaccaacaggcccgacatcatcgaccca
gccctcatgcggcccggccgcctggaccagctcatctacatcccgctgccagacgacggc
agccgccggtccatcttcaagagcgcgctgcgcaagtcgccggtggcgcccgacgtcgac
ctggacctgctgtccaaggtgacccagggcttctccggcgccgacatcaccgagatctgc
cagcgcgccgtcaagtacgccatccgcgagtcgatcgagaaggacattgagcgcaaccgg
cgcaagcaggagaatgaggacctgatggacgaggatgacacagatccggtgccctgcatc
accaaggcgcactttgaggagagcatgaagtttgcgcgccgctctgtcagtgatgctgac
atccgcaagtaccaggcctttgcgcagacgctgcagcagtcccgcggctttggcagcgac
ttccgcttccccgatgcgggcggtgccgcggccgccgcccctggcgctgctgccgcaccc
gccgcggcagccggcacgttcgcttctgcaggggcagcggatgaggaggacgatttgtac
tcttga
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