Chlorella variabilis: CHLNCDRAFT_140725
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Entry
CHLNCDRAFT_140725 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvr03036
]
CHLNCDRAFT_140725
Enzymes [BR:
cvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHLNCDRAFT_140725
Chromosome and associated proteins [BR:
cvr03036
]
Eukaryotic type
Meiosis-specific proteins
Others
CHLNCDRAFT_140725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Sec63
SNRNP200_wHTH
Helicase_C
ResIII
HHH_5
Cdd1
IMS_HHH_1
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
17358242
NCBI-ProteinID:
XP_005850959
JGI:
ChlNC64A_1_140725
UniProt:
E1Z621
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MASGWPTQQPLGASQQQQRQWQPPYQTAGPSLPAGPIAMSTCAAQLGPPPWPPGGDGRLR
AVEELPTCFRPAFPFRYFNAIQNDCWPTIYESSMNVVISAPTGGGKTILLELAILRMLLQ
HISPAGQFGHRPGHLKAVYLAPARALEKVRGWSQRFATLGVTCAELTGDTGHEGLEALDS
ADIICATPEKFDAVTRSGMRFFADIGLVLIDEVHLLNESRGSSLEGVVARIKMVSRLREM
RGQPISRVRYVAVSATIPNVRDLAQWLGAPPAGIKCFGEEMRPVKLRTVVRGYNPTKTDF
LFERRLNDYIYQIVADFSSGKPTLVFCSSRKGTGETAAHLAREAAKAGASWRGGAASAAG
STFVRDGAQAQRLAAAAGRLKTAALRECVQMGIGFHHAAMEPDERAAIEALFIAQDLPVL
CTTSTLALGVNLPARLVVVKGTRRYVGSEAEDASGYQEYERSTCLQMVGRAGRPQYDTEG
VAVIMTQKPNVRRYEELTSGSEVVESQLKGVLAELLNAEVVLRTIGDAIEWLRCTYLYVC
LQRSPARYGVPPQPSTDALDRWLRDKLVLGTVQELAQHGMVRLHDDGFGLEPLQPGAIMA
ERYIRMRTMVSLCTMAPGAAIPDLISVLARSAELANIKLRRSEKKARQPVLNEVNHSDRV
RYPIMGAKPGKVLERITSAAHKIHILVNEGLSDVPTDKLDYSLKQDVEQVVSAGKRIAGA
MVRFFEHAGKASETFNSLLLAKSLRQRLWTDSQMETRQLPGIGPLIAQRLAAAGVHKLRQ
LAEVEPRRLESLAQRHYPFGNEVQAALGACMPPAVNLQCLPVAWLSGGLVELEVTGKGAN
AGAVERVGSSTAPSPARLLVGSLHDDAMLLCRSLALEQFPSPLVVASVVHERLVGVDVAV
RTTVPPGVRLQGQACQAAKMAAAGVPEAAAAQEGWQSQPFAAGMGEAAGKRRKLAASLAA
VPARAASVPSEDPPAVVPAAAPTRPAAAPAPPPETGKVAALSLPKLNWLSGMFGPVAAQP
AAPSPTPAVAAAEQAPPDFAPLFSFL
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggctggccgactcagcagcctctgggcgccagtcagcagcagcagcggcag
tggcagcctccctaccagacggctgggccctcactaccagcagggcccatcgccatgagc
acctgtgcagcacaactgggccctccgccatggccgcctggcggcgacggccgcctgcgc
gccgtggaagagctgcccacgtgcttccgccccgccttccccttccgctacttcaatgcc
atccagaacgactgctggcccaccatctatgagagcagcatgaatgtggtcatctcagcg
cccaccggcggaggcaagaccatcctgctggagctggccatcctgcgcatgctgctgcag
cacatcagcccggccggccagtttgggcacaggccgggccacctcaaggctgtgtacctt
gcgcccgcccgagcgctagagaaggtgcggggctggagccagcgctttgcgacgctcggc
gtcacatgcgcggagctgacgggcgacacggggcatgaggggctggaggcgctggactct
gccgacataatctgcgccacccccgagaagtttgacgccgtcacccgctccggcatgcgc
ttcttcgccgacataggactggtgctcatcgacgaggtgcacctgctgaacgagagccgc
ggcagcagcctggagggcgtggtggcgcgcatcaagatggtcagcaggctgcgtgagatg
cgggggcagcccatcagcagggtgcggtacgtggcggtgtctgccaccatccccaatgtc
cgggacctggcgcagtggctgggggcaccgcccgccggcatcaagtgctttggggaggag
atgcggcccgtcaagctgcggaccgtggtgagaggctacaacccgacaaagacagacttt
ctgtttgagcggcgcctgaacgactacatctaccagatagtggcagacttttcgagcggc
aagcccacactggtgttctgcagcagccgcaagggcaccggcgagacggcggcccacctg
gctcgcgaggcagccaaggcaggcgccagctggcgcggcggcgccgccagcgccgccggc
agcacctttgtgcgggatggcgcacaggcgcagcgcctggcggcggcggcagggaggctc
aagactgcggcgctgcgggagtgcgtgcagatgggcatcggcttccaccacgccgccatg
gagccagatgagcgggcggcgattgaggcgctgttcatcgcccaggacctgccggtgttg
tgcaccaccagcacgctggcgctgggcgtcaacctgcctgccaggctggtagtggtgaag
ggcacgcggcgctacgtgggcagcgaggcggaggatgcgtctgggtaccaggagtatgag
cgcagcacctgcctgcagatggtggggcgtgcgggcaggcctcagtacgacactgaggga
gtggcggtgatcatgacgcagaagccgaacgtgcgccgctacgaggagctgaccagcggc
agcgaggtggtggagtcgcagctgaagggggtactggcggagctgctgaatgcagaggtg
gtgctgcgcaccatcggcgacgccatagagtggctgcgctgcacctacctgtatgtgtgc
ctgcagcgcagccccgcacggtacggcgtaccgccgcagccctccaccgacgcgctcgac
cgctggctcagggacaagctggtgctgggcacggtgcaggagctggcgcagcacggcatg
gtgcgcctgcacgacgacggctttggtctggagccgctgcagccgggggccatcatggct
gagcggtacatccgcatgcgcaccatggtcagcctgtgcaccatggcgccgggtgccgcc
atccccgacctcatctccgtgctggccaggagcgccgagctggccaacatcaagctgcgg
cgcagcgagaagaaggcgaggcagcctgtgctgaacgaggtcaaccactctgaccgcgtg
cgctaccccatcatgggcgccaagccgggcaaggtgctggagcgcatcaccagcgccgcc
cacaaaatccacatcctggtgaatgaggggctgagcgatgtgcccaccgacaagctggac
tacagcctgaagcaggatgtggagcaggtggtgagcgcgggcaagcgcattgccggcgcc
atggtcaggttctttgagcacgctggcaaggcctcggagaccttcaactcgctgctgctg
gccaagagcctgcggcagcgcctgtggaccgacagccagatggagacgcggcagctgccc
ggcatcgggccgctgattgcgcagcgcctggcggcggcgggggtgcataagctgcgccag
ctggcggaggtggagccgcggcgcctggagtcgctggcacagcggcactacccctttgga
aacgaggtgcaggccgcgctgggcgcatgcatgccgccggccgtcaacctgcagtgcctg
ccggtggcctggctgtcgggcgggctagtggagctggaggtcacaggcaagggcgcgaac
gcgggcgctgtggagcgtgtgggcagcagcaccgctcccagccccgcccgcctcctggtg
ggctccctgcacgacgacgccatgctgctctgccgctcgctggcgctggagcagtttccg
tctcccctggtggtggcatccgtcgtgcatgagcggctggtgggcgtggatgtggcagtg
cggacgacagtgccgccgggggtgcggctgcagggccaggcctgccaggcagccaagatg
gcagcagcaggcgtcccggaggcggcagcagcgcaggaggggtggcagagccagccattt
gcagctggcatgggggaggctgctggcaagcggcgcaagctagcggcgtccctggctgct
gtgccggcgcgtgctgcctcggttccgagcgaagacccgccagcggtggtgccagctgca
gcccccaccagacctgccgctgctcccgccccgccccctgaaaccggcaaagtggctgcc
ctcagcctgccaaagctcaactggctgtcgggcatgtttgggcctgtggctgcccagcct
gctgctccatcgccgacacccgcggtggcagcagcggaacaggcgccgcccgactttgca
ccactgtttagctttctgtga
DBGET
integrated database retrieval system
