Chlorella variabilis: CHLNCDRAFT_142420
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Entry
CHLNCDRAFT_142420 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cvr03032
]
CHLNCDRAFT_142420
03400 DNA repair and recombination proteins [BR:
cvr03400
]
CHLNCDRAFT_142420
Enzymes [BR:
cvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHLNCDRAFT_142420
DNA replication proteins [BR:
cvr03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
CHLNCDRAFT_142420
DNA repair and recombination proteins [BR:
cvr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
CHLNCDRAFT_142420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
17357444
NCBI-ProteinID:
XP_005850456
JGI:
ChlNC64A_1_142420
UniProt:
E1Z732
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MGTQLEPECVLDSDEEPCLAAGALSRYVRVAEEEEEAVLSDGEPAWVAPAQWAEPEPAAL
RQLNALLPPSTLQQQLAAQGKRAATQAAELSGALEAVGNDPSGVTQLRDAGTGLLEQQPC
RSAAAAAGRAPGGASASFLNRRVLPRVPSRVEELRQKLQGCPAAVAAAAAGDEEGDADDE
LEPATASAAEPRPAAPRQPPRQQQQQHQQWRPPPLPALACATFTVCPAEAAKPEPGLAHP
PAAAAPAATFHRTADGLNVVRLNRQTHSNAAEAAGGSGSGKAKGRTDNVNSGWGNNFVRI
DLKKGRGSTKFGTKYGTKYGGKKRHGGRGGRGGSRWQVPRMRQVGDGADYLEGWQGSRMR
CYKCGGTGHFAKDCTAEQQAQADTGALCSASSGEEGQAGGQRGSAARTARHAAAALPQGQ
PWLPGQAGSAPGAAAAAASTAAAGPAANSQRVASAASLPPPPADPAGQYAEVLADASEEA
LTGVLRGVFGHPAFRGLQLASVQRLLGGESLLAIMPTGMGKSLCYQLPAVLLPGLTLVVS
PLIALMHDQAASVPPPLTAAVLWSGQSRADALQVLADVAGGRIKVLFVSPERLNNPHLLE
ALRPRMPLPLVVVDEAHCVAEWGHSFRPAYFRLGAALASGVQAQRILALTATATRATEAA
IRQVLRIPAESVLRDTAVRQNLRLQVLRTAGGGSSQSSRDRICGLLTGSGPLAACRSAIV
YVAFKEDANQLARLLGARGISARAYHAGKDYRERSAVECDFAGGRVRVVVATVAFGMGIN
LARVSAVVHATLPRSLEEYVQQVGRAGRDGGEARCVALLDDADFVRLRSLAFSGVLDLAA
VRGFLEAVFSPVAEGEQRRRQGGKKAAAAAAKKAAVAKKGAAAAAACSAGKGRGRKRKAA
MDAGSEEEEGEEEEDGEKAAAEAGADADAEAEALPGSSDATEEPPGEGEESGQQVAAAAA
AAAAAAAAAGPPPRRRFGVLAMKRLAAELDMREDSMESVLSYLEADAAPCLRMLPATALS
VKVCFYSAAAEQLAVQYPVVQSVLDSCPNPRNGVYSVPAARLAAAAQQAPGLVLQQLRGM
AAGSLISFELSREEGPAYEILHTPADLDGLAERVHARLAAVLSCQVERLDVSYRALMAAV
QAGQAAMGGAEEQQAAQEAALRQALERYFDEGQAGGGSGDGGSAPPNSSAALEGAAAPGG
QPHTAAALLLDTAGLPLKRAEPALLGAARAVLRRNREQAGPELSGRALARILHGVGSPAF
PPDPWGKRMGAFWGSQMHVDFAAVLKAAEIVTRDDA
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgcagttggagccggagtgtgtgctcgactcggacgaggagccgtgcctagca
gcaggcgccctcagccgctacgtgcgagtcgcagaggaggaggaggaggccgtgctgagc
gatggggagccggcctgggtggcaccagcacagtgggcagagcccgagcccgccgccttg
cggcagctcaacgcgctgctgccgcctagcacgctgcagcagcagctggctgcgcagggc
aagcgcgccgccacccaggcagcggagctgtcgggggcgctggaagcagtgggcaacgat
ccttcaggggtgacacagctgcgcgacgctggcaccgggctgctagagcagcagccgtgc
cggtcagcagcagcggcggcgggacgagcccctggcggcgcctcggcatcgttcctgaat
cgcagggtgctgccccgggtgcccagccgtgtagaggagctgcgacagaagctgcaggga
tgccctgccgcagtggcagcagcagcagcaggagatgaggagggcgatgcagatgatgag
cttgagccggccaccgccagcgctgctgagccacggcccgccgcaccccgccagccaccg
cggcagcagcagcagcagcaccagcagtggaggcccccgccgctgcctgcattggcttgc
gccacctttaccgtctgccctgctgaggcggcaaagcccgagccaggcctggcccatccc
ccggcagcagcagccccggcagccaccttccaccgcaccgctgatggcctgaatgttgtg
cgactcaataggcagacccactcaaacgccgcggaggcggcaggcggcagcggcagcggc
aaggccaagggcaggacggacaatgtgaacagcgggtggggcaacaactttgtgcgcatc
gatctcaagaaggggcgcggcagcaccaagtttggcaccaagtacggcaccaagtatggc
ggcaagaagcgccatggaggcaggggcggcagggggggcagcagatggcaggtgccacgc
atgcgccaggtgggcgatggcgccgactatctggagggctggcagggcagccgcatgcgc
tgctacaagtgcggcggcaccggtcactttgccaaggactgcaccgcggagcagcaggcg
caggcagacacgggggctctgtgcagcgccagcagcggcgaggaggggcaggcgggcggc
cagcgcggcagcgccgcaaggaccgcgcgccatgcagcagcagctcttcctcaggggcag
ccctggctgcctggccaggcaggcagcgcgccgggtgcagcagcagcagccgcctccacc
gcggccgccggccccgccgccaacagccagcgggtggcttcagcggccagcctgccgccg
ccgcctgcagaccctgcggggcagtacgccgaggtactggcggatgccagcgaggaggcg
ctgacgggcgtgctgcgcggcgtgtttggccaccccgccttccgcggcctgcagctggcc
agcgtgcagcggctgctgggcggggagagcctgctggccatcatgcccacaggcatgggc
aagagcctgtgctaccagctgcccgcggtgctgctgccggggctgaccctggtggtatcc
cccctcatcgcgctcatgcacgaccaagccgcctcggtgccgccaccgctgactgcagcg
gtgctgtggtcggggcagagccgggcggatgcgctgcaggtgctggccgatgtggctggc
ggccgcatcaaggtgctgtttgtcagccccgagcgcctgaacaacccgcacctgctggag
gcgctgcggccgcgcatgccgctgccgctggtggtggtggatgaggcgcactgcgtggca
gagtggggccactccttccgccctgcctacttccgcctgggcgccgcgctggccagcggc
gtgcaggcgcagcgcatcctggcgctcaccgccaccgctacccgcgccacagaggcagct
atccggcaggtgctgcgcatcccggcggagagcgtgctgcgggacaccgccgtgcgccag
aacctgcgcctgcaagtgctgcgcaccgcgggaggcggctccagccaatccagccgcgac
cgcatctgcggcctgctcaccggcagcggcccgctggcggcctgccgctccgccattgtg
tacgtcgccttcaaggaggacgccaaccagctggcacgcctgctgggggcgcgcggcatc
agcgcccgcgcctaccacgccggcaaggactaccgggagcggtctgctgtggagtgtgac
tttgccggcgggcgggtgcgtgtggtggtggccacggtagcctttggcatgggcatcaac
ctggcgcgcgtgtcagcggtggtgcacgccacactgccgcgcagcctggaagagtatgtg
cagcaggtggggcgcgcggggcgcgacggcggcgaggcacggtgcgtggcactgctggac
gacgccgactttgtgcgccttcgctcgctggcgttcagcggagtgctggacctggctgcc
gtgcgcggcttccttgaggctgtcttctcgcccgtggcggagggggagcagcggcgcagg
caggggggcaagaaggcggcagcggcggcggccaagaaggcggcggtggcaaagaaaggg
gcggccgcggcggcagcttgctccgccggcaagggcaggggcaggaagcgaaaggccgcc
atggatgccggctcggaggaggaggagggagaggaggaggaggacggagagaaggcagca
gcagaggcaggagcagatgcggatgcagaggcagaggcgctgccaggcagcagtgatgca
acagaggagcctccaggcgagggcgaggagagcgggcagcaggtcgccgcggcggcggcg
gcggcggcagcggcagcggcagcggccgggccgccgccgcggcgtcggtttggcgtgctg
gccatgaagcgcctggctgctgagctggacatgcgtgaggacagcatggagagcgtgctt
tcctacctggaggcggacgcggcgccctgcctccgcatgctgcccgccactgctctgtcg
gtcaaggtctgcttctactcggcagctgccgagcagctggcggtgcagtacccggtggtc
cagtctgtgctggattcgtgccccaacccgcgcaacggcgtgtacagcgtgcccgccgcc
aggctggcggcggcggcgcagcaggcgccgggcctggtgctgcagcagctgcgcggcatg
gcggcgggcagcctcatcagctttgagctgtcgcgggaggaagggcctgcctacgagatc
ctgcacacccctgctgacctggacggcctggcggagcgggtgcacgcccggctggcggcg
gtgctgtcgtgccaggtggagcgcctggatgtatcgtaccgcgccctgatggcggcggta
caggctggccaggcggcgatgggcggcgcggaggagcagcaggcggcgcaggaggcggct
ctgcggcaggcattggagcgatactttgatgaggggcaggctggaggcggcagcggtgat
ggcggcagtgcgccgccaaacagcagtgcggcattggagggggcagcggctccgggtgga
cagccccacacggcggcggctctgctgctggacacggcggggctgccgctgaagcgtgcg
gagccagcgctgctgggcgcggcgcgggcggtgctgcggcgcaaccgggagcaggcgggg
ccggagctgtctgggcgcgccctggcccgcatcttgcacggcgtgggcagccccgccttc
ccgcctgacccctggggcaagcgcatgggcgcattctggggcagccagatgcacgtggac
tttgcggcggtgctcaaagcggcggagattgtgactcgggatgatgcctga
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