Chlorella variabilis: CHLNCDRAFT_142930
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Entry
CHLNCDRAFT_142930 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvr03041
]
CHLNCDRAFT_142930
03009 Ribosome biogenesis [BR:
cvr03009
]
CHLNCDRAFT_142930
Enzymes [BR:
cvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CHLNCDRAFT_142930
Spliceosome [BR:
cvr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CHLNCDRAFT_142930
Ribosome biogenesis [BR:
cvr03009
]
Eukaryotic type
90S particles
Helicases
CHLNCDRAFT_142930
Pre-60S particles
CHLNCDRAFT_142930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
17357286
NCBI-ProteinID:
XP_005849550
JGI:
ChlNC64A_1_142930
UniProt:
E1Z935
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MSGGFAKKLKNKQSRVSVQGPTAAPEHSKEENGQEEQHTQKKRKLQAGAAAVPAAAATAA
VAKAAAGDDGERDNQPSQKKQKGHVGLEVEHQTATVSGIMSSQTFDQLDLAESTKRGIQE
LGFVNMTEVQARTIPQLLVGRDVLGAAKTGSGKTLAFLIPCVELLYRAKFMPRNGTGAVV
ILPTRELALQIYNVARDVMQHHTQTHGLVMGGANRRAEAEKLVKGVNLLVSTPGRLLDHL
QNTKGFVYRNLACLVIDEADRILEIGFEEEMRQIVKILPKDRQTMLFSATQTTKVEDLAR
LSFKRKPLYVGIDDTKAVATREGLEQGYCVVPADKRFLLLFTFLKKNASKKVMVFFSSCN
SVKFHSELLNYIDIPVKAIHGKQKQAKRTTTFFEFCQADSGILLCTDVAARGLDIPAVDW
IIQYDPPDDPKEYIHRELSFLKYLKAAKVPLNEYEFPTSKLSNVQSQLEKLVEKNYYLHQ
SAKEAFRSYILAYNSHHLKDTFNIHSLDLKAVARSFGFSSPPRVNINLESKAAHTRKAQK
AGHGADYRRMKSGHKFSASNPYGKVQEADTRQFVRV
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcggcttcgcgaaaaagttgaagaataagcagtcccgtgtgtcagtgcaaggg
cccacggcagcaccagaacactccaaggaggagaatggccaagaggagcagcacacgcag
aagaagcgcaagctgcaggcgggagcggcagctgtgcctgccgccgccgccaccgctgca
gtagccaaagcagcagcgggcgatgatggtgagcgggacaaccagccttcgcagaagaag
cagaaggggcacgttgggctggaggtggagcaccaaaccgcgactgtcagcggcatcatg
tcgtctcagacttttgaccagttggacttggcggagtccaccaagcggggcattcaagag
ctgggatttgtaaacatgacagaggtgcaggcacgcaccatcccgcagctgctggtgggc
cgcgacgtgcttggagccgccaaaacagggtcgggcaagacgctcgccttcctcatacca
tgcgtggaactgctttaccgtgccaagttcatgccgcgcaacgggaccggcgctgttgtc
atcctgccaacccgcgagctggcgctgcagatctacaacgtggcgcgcgatgtgatgcag
caccacacgcaaacacatggcttggtgatgggcggtgccaatcgacgtgccgaggccgag
aagctggtcaagggcgtcaacctgctggtctccacacctggccgcctgctggaccacctg
caaaataccaagggctttgtgtaccgcaacctggcctgcctggtgattgatgaggcggat
cgcatcttggagattgggttcgaagaggagatgcggcagattgtcaagatcctgcccaag
gaccgccagaccatgctgttcagcgcgacacaaactacaaaggttgaggacctggcacgg
ttgtcctttaagcgcaaaccactgtacgtcggcatagacgacactaaagccgtggccacc
cgagaggggctggagcagggctactgcgtggtgcctgccgacaagcgtttcctgctgctt
ttcacatttttgaagaagaatgccagcaagaaggtgatggttttcttcagcagctgtaac
agcgtcaaattccatagcgagctcctcaactacattgacattcccgtcaaggccatccac
ggcaagcagaagcaggcgaagcgcaccaccacgttctttgagttttgccaggcagacagt
ggcatcctgttgtgcacggacgtggcggcacgcggcttggacatccccgcagtagactgg
atcatccagtacgatccacctgatgatcccaaagagtacatccaccgtgagctgagtttc
ctcaagtacctcaaggcggccaaggtgcccctgaacgagtacgaattccccaccagcaag
ctgagcaatgtgcagagccagctagagaagttggtggagaagaactactacctgcaccag
agcgcaaaggaagcttttaggtcgtacattctggcctacaactcgcaccacctcaaggac
acattcaacatacactcactggacctcaaggccgtggccagaagttttggcttctcctct
ccgccacgcgtgaacatcaacctagagagcaaggccgcacacacgcgcaaggcgcagaag
gcagggcacggcgccgactaccggcgcatgaagtcgggccacaagttcagcgcttcaaac
ccgtatggcaaggttcaggaagcagacacgcgccaatttgtgcgtgtgtga
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integrated database retrieval system
