KEGG   Chlorella variabilis: CHLNCDRAFT_143127
Entry
CHLNCDRAFT_143127 CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
cvr  Chlorella variabilis
Pathway
cvr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CHLNCDRAFT_143127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvr03019]
    CHLNCDRAFT_143127
   03041 Spliceosome [BR:cvr03041]
    CHLNCDRAFT_143127
   03032 DNA replication proteins [BR:cvr03032]
    CHLNCDRAFT_143127
Messenger RNA biogenesis [BR:cvr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     CHLNCDRAFT_143127
Spliceosome [BR:cvr03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CHLNCDRAFT_143127
  U2 snRNP components
    CHLNCDRAFT_143127
 Complex B
  U1 snRNP components
    CHLNCDRAFT_143127
  U4/U6.U5 tri-snRNP components
    CHLNCDRAFT_143127
 Complex C
  U2 snRNP components
    CHLNCDRAFT_143127
DNA replication proteins [BR:cvr03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CHLNCDRAFT_143127
SSDB
Motif
Pfam: LSM SM-ATX E3_binding LSM14
Other DBs
NCBI-GeneID: 17356779
NCBI-ProteinID: XP_005849885
JGI: ChlNC64A_1_143127
UniProt: E1Z9I6
LinkDB
Position
Unknown
AA seq 126 aa
MTMAAAGSLKGVGVPIKLLHEATGHVCTVELKSGEIYRGEMYEAEDNWNVQLSNVQATGR
DGKVTHMEHIFIRGGRVRFVIVPDMLKNAPMFKRIDPKNKMKSAVLGVGGRGRAVADRAN
RNVGRI
NT seq 381 nt   +upstreamnt  +downstreamnt
atgacgatggctgcggcaggctccctcaagggagtgggagttcccatcaagttgctacac
gaggccacggggcacgtgtgcacggtggagctgaagagcggcgagatctaccggggcgag
atgtatgaggcggaggacaactggaatgtgcagctgtcaaacgtgcaggccacggggcgc
gatggcaaggtgacccacatggagcacatcttcattcgcggcggccgagtgcgcttcgtc
atagtgccagacatgctcaagaatgcgcccatgttcaagcggatcgaccccaagaacaag
atgaagtctgcggtactgggggtgggcgggcgcgggcgcgcggtggccgaccgggcaaac
cgcaatgtcggccgcatttga

DBGET integrated database retrieval system