Chlorella variabilis: CHLNCDRAFT_143199
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Entry
CHLNCDRAFT_143199 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvr03036
]
CHLNCDRAFT_143199
Chromosome and associated proteins [BR:
cvr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CHLNCDRAFT_143199
microRNA pathway
RISC loading complex
CHLNCDRAFT_143199
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
Helicase_C
DEAD
Dicer_dimer
ResIII
Dicer_dsRBD
dsrm
Motif
Other DBs
NCBI-GeneID:
17356950
NCBI-ProteinID:
XP_005849661
JGI:
ChlNC64A_1_143199
UniProt:
E1Z9P6
LinkDB
All DBs
Position
Unknown
AA seq
2232 aa
AA seq
DB search
MSQPGAAEAPPEPADAPLPPPPQTGAAAAAGAPEPASKPAATQARIYQLELLELAKKRNV
IAFLDTGAGKTFVSVLLIRHRMAEQRRLAAQAAAARHHPRAATPAPAPAADAGPSAAGEA
PAAAPATPAAAGATRNGSRVDEASGVHGSVHGGDSGGTGSPPHREHRVAIFLAPKVALVV
QQAEVLRAHLGADQVAHFVGEMGVDLFEKERWHAAFADHDVLAMTPQILLNLLSHGIIKA
SLRPRQHPSGQLLRLAKQSAQRALAAALTQESHAPPVSSEVQLAAPRLGPSPRLPLPPAT
RPQMSQVHLLVFDECHHCKSKHPFNRIMQQFYHSHEALLAPRPHVFGMTAAPANVGRRET
QEDMEAKIRVLEANLDARVVTVVNRASVEEVARPPTLRVAAYRPSWWEGTPVAVTQRLLL
RARRRLQCAGENFELQWLRSLQRQLGCEGLEPSAHCIFFDPLVPGFTAARLDQMLSSVEH
VLQTLGPYCAALCAAEVFASLVQPPASTSGTAYCYAQLRKRRGGGQGAAEAAAEDEGPAA
AGEEGEGQRAGPSTPANAAMQLSEEVAALREAALVDHVLANSFDLAEVESEQAAAHHSVM
DVLEAFAGLFGQHPFLPPATAPGKPAGHESRAAPATGSWQPGDGQHEAGGQHQEQQQGEQ
GEQAPGEQAQQDLPELLADVRARVAAGQLLGAQPLLAMRAMLRGVSAQHLQRDVERQLPA
QQAVAAAAAAAAAAAAAAAAVKASAAAAGGNDAIILAGACEEGGCLEEQLLAATALADSS
MPHFHLVSPKMAALAGQLMRYRGAAAALAPGPGWCGIVFVTQRMAAWALHKMLSTLPATR
GVFRTSAIMGLGPREQSRILRRFRAGELNLLVSTSVAEEGIDVKSCQLVVRYDLPNNAQS
YIQSRGRARMINSELLMMVQEGVEEEHRMVRHMVEYEHQLRQEVLLNIERLQAGAIDDDA
DVAAEAAELQAALAHAPVYEVESTGARATLENAQARPHTCAQAASRPAQRRCSCCRTAVQ
EGPLALLHTYTSKLPSDQYTVLRPLFRTEQLDQRVFRTRVFLPNNSPLPWADGLGALNDF
LLPAVLDEAKRAAHTPRAAKGPREGQAAGHKRLAEPGSLRGLLAQDRATLHCYRWEARGA
CGACPAAEGAAADPQLRQLLSSLELLGLLLPQPLPNQLPAFTLTAPAPPAAAADPAAADA
ACVPPCGTAAAGHPRAEPGDGSATGTSGASSVGASIQVRLVPAGTAELAPDQLQLLLACG
SALLAQMLSRGSYSGAAAALIAATLPTGPRPAGTAAGAAAPTGVDGTPAAAATAAASTAA
AQEQPPISTPVSVAVPAEGSSEAASGSMETPREAAAADRPVPMDAEVAASPEDAEAAAAA
EQLAHRAVHSVLLLHDGRGLPRRNRHRAGGAAAKLAAGAAAAGDAGFLIVPLLGHVPGME
QAGEGRQEQGGKVEAGSSRGEASSQGRAVGGARRGDAAAGVDWGAVRSIAATAAFKGTLL
EWLRQQVQEQVQEQAQEQGGQAAGSSSCSGAAMRKALAGRVLVATHNNAAYLYRQAWRCA
STFERREPEYVQAKRARKEHKAAAAAAAGTGAGVQPEEGEAAAAAAQAPAAAEAADACMP
DAAPAEPGAATAGPAAEPAPEQPALVSYAAYYAERWGQRELDEGQPLLAAARVSRQQLAR
GLDMRRARKRGCALQLEAEEEVRLLPQLCIVHPVPAALWRPLGTLPALMWQLEGALLADQ
LLEQMLPADLPPEKAPPLELLRTTRLETLGDAFLKFAVSAQLFSAHRQYHEGQLTKRKEL
VVANIHLAEAAVKLGLDRRLRVLPFSMHNWASPEAVRKSSKVLADAMEALLGAFLVAGGY
PAALAFLQASAGRRGRRLRLPRAAAPGWGLCSQPYSQHLGLLKGWVPISAEACIPPESPE
LECDVGAIEAVLGHTFASKWLVVEALTHCSWPGSGVRCFQRLEFLGDAVLDALMHDMRSV
AVNASRLAYAGKPGLDFVEEWRDRLREALEAQEQQACPASPAGGTAGAAAGDADAAASKE
ALRAAELSVMTQFAFGFQTIQAPKASGRDQPPSPALHCLQTVLSDVVESLIGAVFVDTGG
DMGRVWEVTQRLLDPMVVPETLPVHPIRRLQELVQRCGVNPKYEEAGREQGGAGRVHVKV
SAQGVVLGESVMQATNFRAACRLAAEAAVKGWADRSAKVLEAKAAAAAAAAAVAAEAAPA
AEGTPARDAPHS
NT seq
6699 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagccaggcgccgccgaggcgccaccagagccggcggacgctccgctgccgccg
ccgccgcagacgggggcggccgctgcggctggcgctccagagcctgccagcaagcctgcc
gccacccaggcccgtatctaccagctggagcttctggagctggccaagaagcggaacgtc
attgctttcctggacaccggcgctggcaagacgtttgtttcggtgctgctcatccgccac
cgcatggcggagcagcggcggctggcggcacaggcggcggccgcgcggcaccacccacgc
gccgccacgcccgctcctgcgcccgccgccgacgccggccccagcgccgccggcgaagcc
cccgccgccgctcctgccacccctgccgcggctggcgcgacacgcaacggcagccgcgtg
gacgaggccagcggcgtgcacggcagcgtgcacggcggcgacagcggcggcacaggtagc
cctccccacagggagcaccgcgtggcaattttcctggcacccaaggtcgcgctggtggtg
cagcaggcggaggtgctgcgggcccacctgggcgcggaccaagtggcgcactttgtgggc
gagatgggggtggatctgtttgagaaggagaggtggcacgccgcctttgcggaccacgat
gtgctggccatgaccccccagatcctgctcaacctgctgagccacggcatcatcaaggcg
agcctgaggccgcggcagcacccctccggccagctgctgcgcctggccaagcagagcgca
cagcgtgctttggcagctgcgttgactcaagagtcgcacgccccacctgtttcatcagag
gtgcagctggccgcgccgcgcctcggcccctcaccccgcctgccgctgccgccggcgacg
cgcccgcagatgagccaggtgcacctgctggtgtttgatgagtgccaccactgcaagtcc
aagcaccctttcaacagaatcatgcagcagttctaccacagccacgaggcactgctggcg
ccgcggccccacgtctttggcatgacggcggcgccggccaacgtcggccgccgcgagacg
caggaggacatggaggccaagattcgggttctggaggccaacctggatgcgcgggtggtc
accgtggtcaaccgcgcttcggtggaggaggtggcgcggccccccaccctgcgcgtggcc
gcctaccgccccagctggtgggaggggacgccagtggcggtgacgcagcgcctgctgctg
cgggcgcgccgccgcctgcagtgcgcgggagagaactttgagctgcagtggctgcgctcg
ctgcagcgccagctggggtgcgagggcctggagccctcagcccactgcatcttcttcgac
ccgctggtgcctgggttcacggccgccaggctggaccagatgctgagcagcgtggagcac
gtgctgcagacgctggggccgtactgcgctgccctgtgcgccgccgaggtctttgcgtcc
ctggtgcagccccccgccagcaccagtggcaccgcctactgctacgctcagctgcgcaag
cgacgcggcggcggtcagggggcagccgaggcagcagcagaggatgaggggccggcggca
gcgggggaggagggggaggggcagcgggcggggccgtccacgcctgccaacgccgccatg
cagctgtcagaggaggtggcggcgctgcgcgaggcggccctggtggaccatgtgctggcc
aacagtttcgacctggctgaggtggagagcgagcaggcggcggcccaccactctgtgatg
gatgtgctggaggcgtttgccggcctgtttggccagcaccccttcctgccccccgccact
gcgcctggtaagccagccggccacgagtcaagggctgcgccagccacgggctcatggcag
ccaggtgatggtcagcacgaggctggcggccagcaccaggagcagcagcagggcgagcag
ggcgagcaggcgccaggggagcaggcgcagcaggatctgcctgagctgctggctgatgtg
cgggccagggtggccgcggggcagctgctgggggcgcagccgctgcttgccatgcgggcc
atgctgcgcggcgtcagcgcccagcacctgcagcgagacgtggagcgccagctgccggct
cagcaggcggtggccgccgcagcagccgctgcagcagcagcagcagccgctgctgctgcc
gtcaaggcctctgccgctgccgctggcgggaatgacgcaatcatcttggcgggggcttgt
gaggagggtggctgcctggaggagcagctgctggcagccactgccctggccgacagcagc
atgcctcacttccacctcgtctctcccaagatggcggcactggcggggcagctgatgcgg
taccgcggcgccgccgccgcgctggcccccggccccggctggtgcggcatcgtgtttgtg
acacagcgcatggcggcctgggcactgcacaagatgctcagcaccctgcccgccacccga
ggcgtcttccgcacctcagccatcatggggctggggccccgcgagcagtcgcgcatcctg
cggcgcttcagggcgggggagctcaacctgctcgtctccacctcagtggctgaggagggg
atcgacgtcaagtcctgccagctggtggtgcggtacgacctgcccaacaacgcgcagagc
tacatccagtcgcgcgggcgggcgcgcatgatcaactcggagctgctgatgatggtgcag
gagggggtggaggaggagcacaggatggtgcgccacatggtggagtatgagcaccagctg
aggcaggaggtgctgctcaacatcgagcgcctgcaggcgggtgccatcgacgacgacgct
gacgtggcggccgaggcggccgagcttcaggcggcgctggcccacgcccccgtgtacgag
gttgagtccaccggcgcccgagcaacgctggagaacgcgcaggcacgcccccacacctgt
gcccaggccgccagccgcccggcgcagcgccgctgctcctgctgccgcactgcggtgcag
gaggggcccctggcgttgctgcacacttacaccagcaagctgccctcagaccagtacacc
gtgctgaggccgctcttccgcacagagcagctggaccagcgcgtcttcaggacgcgcgtc
ttcctgcccaacaactcccccctgccctgggcagacggcctgggcgccctcaacgacttc
ctgctgcctgctgtgctggatgaggccaagcgcgccgcacacacgccgcgcgccgccaag
ggccccagggagggccaggccgccgggcacaagcggctggcggagccgggctcgctgcgc
ggcctgctggcccaggaccgagccaccctgcactgctaccgctgggaggcccgcggggcc
tgcggggcctgcccggcagcagagggcgctgccgccgacccccagctgcgccagctgctg
agctctctggagctgctgggcttgctgctgccgcagccgctgcccaaccagctgcccgcc
ttcacgctcactgcccccgccccgccagcggctgccgccgaccccgctgccgccgacgct
gcttgcgtgcccccctgtggcactgccgccgccggccacccccgggccgagcccggcgac
ggcagcgccactggtacgagcggcgccagcagcgtcggcgccagcatccaggtgcggctg
gtgccagctggcaccgctgagctggcgcccgatcagctgcagctgctgctggcctgtggt
agtgccctgctggctcagatgctgtcgcgaggcagctacagcggcgcggcggccgccctc
atcgccgccacactcccgacgggccccaggcctgccggtactgccgccggtgctgctgcc
cccacgggcgttgacggcaccccggcagcagccgccacagcagccgccagcacagcagct
gcccaggagcagccgcccatcagcactccagtttctgtcgccgtcccagccgaaggcagc
agcgaggcggccagcggcagcatggaaaccccaagggaggcggcagcggcagacaggcca
gtgccgatggatgcagaggtggcggcgtccccagaggatgccgaggcggcggcagctgcc
gagcagctggcccaccgcgccgtgcacagcgtgctgctgctccacgacgggcgcggcctg
ccgcggcgtaatcgccaccgcgcgggcggcgccgccgccaagctggcggccggcgccgct
gcggcgggcgatgccggtttcttgatcgttccgctgctggggcacgtgccaggcatggag
caggccggggagggcaggcaggagcagggcggcaaggtggaggctggcagcagccgtggc
gaggcctcctcgcaaggcagggccgtcggcggtgccagacgcggcgatgctgctgcgggt
gttgactggggggcggtgcgcagcatcgccgccacggctgctttcaagggcacgctgctg
gagtggctgaggcagcaggtgcaggagcaggtgcaggagcaggcgcaggagcagggaggg
caggcggcaggcagcagcagctgcagcggagccgccatgcgcaaggcgctcgcagggcga
gtgctggtggccacccacaacaacgccgcctacctctacaggcaagcctggcgctgtgcg
agcacctttgagcgcagggagcccgagtacgtgcaggccaagcgtgccaggaaggaacac
aaggctgcggcggccgccgctgctgggacgggtgcaggcgtgcagcccgaggagggggag
gcagccgcagccgcagcccaggcgcctgccgcggccgaggcggcagatgcgtgcatgccg
gatgccgcccccgccgagcccggtgcagccaccgccgggccggcggcggagccggccccc
gagcagccggcgctggtcagctatgctgcctactatgcggagcggtggggccagcgggag
ctggatgaggggcagccgctgctggcggcggcgcgcgtgtcgcggcagcagctggcgcgc
gggctggacatgcggcgcgcccgcaagcgaggctgcgcgctgcagctggaggcggaggag
gaggtgcgcctgctgccccagctgtgcatcgtgcacccggtgccggcggcgctgtggcgc
ccgctgggcacgctgcccgcgctgatgtggcagctggagggcgccctgctggcagaccag
ctgctggagcagatgctgcctgcagacctgccccccgagaaggcgcctcccctggagctc
ctgcgcaccacgcgcctggagaccctgggcgacgcctttctcaagtttgccgtgtccgcc
cagctcttctcggcgcatcgccagtaccacgagggccagctcaccaagcgcaaggagctg
gtggtggccaacatacacctggcggaggcggccgtcaagctgggcctggaccgccgcctg
cgcgtgctgcccttctccatgcacaactgggcctcccccgaggccgtcaggaagagcagc
aaggtgctggctgatgcaatggaggcgcttctgggcgccttcctggtggctggaggatac
cccgcagcgctggccttcctgcaggccagtgccggccgccgcggccgccgcctgcgcctg
ccgcgagcggcagcgccgggctggggcctctgctcccagccatactcgcaacacctgggc
ctgctcaagggctgggtgcccatcagcgcagaggcgtgcatcccgccggagagccccgag
ctggagtgcgatgtgggggccatcgaggcggtactggggcacacctttgccagcaagtgg
ctggtggtggaggcgctgacgcactgcagctggccggggtccggcgtgcgctgcttccag
cgcctcgagtttttgggggacgcggtactggacgccctgatgcacgacatgcgcagcgtg
gcggtcaacgcctcgcgcctcgcctacgcaggcaagcctggtctggactttgtggaggag
tggcgggacaggctgcgggaggcgctggaggcgcaggagcagcaggcctgccccgcctcc
cccgctggcggcaccgctggcgcggccgcgggcgacgccgacgctgctgccagcaaggag
gcgctgcgggctgcggagctgtctgtcatgactcagtttgcgtttggcttccaaaccata
caggcccccaaggcaagcggccgcgaccagccacctagccctgcgctgcactgcctgcaa
actgtgctgagcgatgtggtggagtcgctgatcggcgccgtgtttgtcgacacgggcggc
gacatgggcagggtgtgggaggtgacgcagcggctgctggaccccatggtggtgcccgag
acgctgccggtgcaccccatcaggaggctgcaggagctggtgcagcggtgcggcgtgaac
cctaagtacgaggaggcggggcgggagcagggcggtgcggggcgcgtgcacgtcaaggtc
agcgcgcagggcgtggtgctgggggagagcgtgatgcaggccaccaactttagggccgcg
tgccggctggcggcggaggcggcagtgaagggatgggccgaccgctccgcaaaggtgctg
gaggccaaggcagctgctgccgctgccgctgctgctgtagcagcagaagcagcgccagct
gccgagggaacaccggccagggatgcaccgcacagctga
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integrated database retrieval system
