Chlorella variabilis: CHLNCDRAFT_144215
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Entry
CHLNCDRAFT_144215 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
cvr
Chlorella variabilis
Pathway
cvr03020
RNA polymerase
cvr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHLNCDRAFT_144215
09124 Replication and repair
03420 Nucleotide excision repair
CHLNCDRAFT_144215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvr03021
]
CHLNCDRAFT_144215
03400 DNA repair and recombination proteins [BR:
cvr03400
]
CHLNCDRAFT_144215
Transcription machinery [BR:
cvr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
CHLNCDRAFT_144215
DNA repair and recombination proteins [BR:
cvr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
CHLNCDRAFT_144215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
17356254
NCBI-ProteinID:
XP_005848659
JGI:
ChlNC64A_1_144215
UniProt:
E1ZC65
LinkDB
All DBs
Position
Unknown
AA seq
283 aa
AA seq
DB search
MATKTTKREPQVELRKLTDDYCEFVLKGTDVSMANALRRIILVEVPTIAIELVEFEANTT
VLNDEFLAHRLGLIPLVSTRVHDMKSIYEAQVGAWVARRRRHYIHPVGYHDREDKGILLV
KMRRNQELKLRAVARKGTGKDHAKWMPVATCVYQFMPEITINHALMDTLTDDQKEEWCAA
DPRKTFRLNKLTHRVEVTNPELYQYDGEVLAKAEEMGKPGLVAIKQKQDTFIFRVEGTGV
LPPQDIVLTACEVLASKIRNLDAALAEEARRFDGREEPAPMQA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaaaactactaagcgcgagccgcaggtggagctgcgcaagctgaccgacgac
tactgcgagtttgtgctgaagggcacggacgtcagcatggccaacgcgctgcgccgcatc
atcctcgtagaggtgcccaccattgccatcgagctggttgagtttgaggccaacaccacg
gtgctgaacgacgagttcctggcgcaccgcctgggcctcatacccctcgtgtccacccgc
gtgcacgacatgaagagcatctacgaggcacaagtgggcgcatgggtggcccgcaggcgg
cggcactacatccacccggtgggctaccacgaccgcgaggacaagggcatcctgctggtc
aagatgcggcgcaaccaggagctcaagctgcgggcggtggcgcgcaagggcacgggcaag
gaccacgccaagtggatgcccgtggccacctgcgtgtaccagttcatgcccgaaatcacc
atcaaccacgccctcatggacactctcacagacgaccagaaggaggagtggtgcgcagca
gacccgcggaaaacgttccggctgaacaagctgacgcacagggtggaggtgaccaacccc
gagctgtaccagtacgacggcgaggtgctggccaaggcggaggagatgggcaagccgggg
ctggtggccatcaagcagaagcaggacaccttcatcttccgggtggagggcaccggcgtg
ctgccgccccaggacattgtgctgaccgcctgcgaggtgctggccagcaagatacgcaac
ctggatgcggcgctggcggaggaggcgcgccggtttgacggccgggaggagccggcgccc
atgcaggcgtga
DBGET
integrated database retrieval system