KEGG   Chlorella variabilis: CHLNCDRAFT_145153
Entry
CHLNCDRAFT_145153 CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
cvr  Chlorella variabilis
Pathway
cvr03020  RNA polymerase
cvr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CHLNCDRAFT_145153
  09124 Replication and repair
   03420 Nucleotide excision repair
    CHLNCDRAFT_145153
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cvr03021]
    CHLNCDRAFT_145153
   03400 DNA repair and recombination proteins [BR:cvr03400]
    CHLNCDRAFT_145153
Transcription machinery [BR:cvr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     CHLNCDRAFT_145153
DNA repair and recombination proteins [BR:cvr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CHLNCDRAFT_145153
SSDB
Motif
Pfam: RNA_pol_Rpb4 TPR_ESP1
Other DBs
NCBI-GeneID: 17355540
NCBI-ProteinID: XP_005848381
JGI: ChlNC64A_1_145153
UniProt: E1ZCQ2
LinkDB
Position
Unknown
AA seq 130 aa
MPAKVDDEVLGDKDIKVLTISEVACLIDEYVKGTQQRDADYQPNPMLVKAAEYASRFATN
KNRDTLQKIREVIAHNQLSELELGLVANLSIETADEARKLVPTLDDRDRFPDDATLDALL
KELATYREFE
NT seq 393 nt   +upstreamnt  +downstreamnt
atgccagcaaaggtggacgacgaggtcctgggggacaaggacatcaaggtgctcacgatc
agcgaggtcgcatgcctgattgacgagtatgtcaagggaacgcagcagcgagacgccgac
taccagcccaaccccatgctggtcaaggcggcagagtacgccagtcgctttgccaccaac
aagaacagggacacgctgcagaagattcgggaggtgattgctcacaaccagctgtcagag
ctggaattggggttggtggccaacctgtcgatcgagacggcagatgaggcacgcaagctg
gtgcctacgttggatgaccgggatcggtttccagatgatgccacgctagatgccctgctc
aaggagttggccacatacagagagttcgagtga

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