KEGG   Chlorella variabilis: CHLNCDRAFT_19308
Entry
CHLNCDRAFT_19308  CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
cvr  Chlorella variabilis
Pathway
cvr03020  RNA polymerase
cvr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CHLNCDRAFT_19308
  09124 Replication and repair
   03420 Nucleotide excision repair
    CHLNCDRAFT_19308
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cvr03021]
    CHLNCDRAFT_19308
   03400 DNA repair and recombination proteins [BR:cvr03400]
    CHLNCDRAFT_19308
Transcription machinery [BR:cvr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CHLNCDRAFT_19308
  RNA polymerase III system
   RNA polymerase III
     CHLNCDRAFT_19308
  RNA polymerase I system
   RNA polymerase I
     CHLNCDRAFT_19308
DNA repair and recombination proteins [BR:cvr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CHLNCDRAFT_19308
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 Zn_Ribbon_YjdM DUF7577 DUF6237 Zn_ribbon_13 DZR DUF5816 Zn_ribbon_3 DUF6510 HypA DUF6083
Other DBs
NCBI-GeneID: 17358590
NCBI-ProteinID: XP_005851333
JGI: ChlNC64A_1_19308
UniProt: E1Z3T6
LinkDB
Position
Unknown
AA seq 62 aa
MQGTAGYGAPAPTGPVQVAYICGDCGAENTLKPGDVIRCRECGYRILYKKRTKRVVQYEA
RW
NT seq 189 nt   +upstreamnt  +downstreamnt
atgcagggcacggcaggctatggcgcaccagcgcccacgggacccgtgcaggtggcctac
atttgcggcgactgcggcgcggagaacacgctcaagccgggggacgtcattcgctgccgc
gagtgcgggtacagaatactgtacaagaagcggaccaagcgcgtggtgcagtatgaggcg
cgatggtga

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