KEGG   Chlorella variabilis: CHLNCDRAFT_19464
Entry
CHLNCDRAFT_19464  CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
cvr  Chlorella variabilis
Pathway
cvr03082  ATP-dependent chromatin remodeling
cvr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CHLNCDRAFT_19464
   03083 Polycomb repressive complex
    CHLNCDRAFT_19464
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cvr03036]
    CHLNCDRAFT_19464
Chromosome and associated proteins [BR:cvr03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     CHLNCDRAFT_19464
  Histone modification proteins
   HAT complexes
    HATB complex
     CHLNCDRAFT_19464
   HDAC complexes
    Sin3A-HDAC complex
     CHLNCDRAFT_19464
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     CHLNCDRAFT_19464
    PRC2.2
     CHLNCDRAFT_19464
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     CHLNCDRAFT_19464
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CHLNCDRAFT_19464
  Chromatin remodeling factors
   NuRD complex
    CHLNCDRAFT_19464
   NuRF complex
    CHLNCDRAFT_19464
   NuRF complex (fruit fly)
    CHLNCDRAFT_19464
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd CAF1C_H4-bd WD40_Prp19 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_WDHD1_1st WDR55 Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd EIF3I MIOS_WD40 Beta-prop_SCAP Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_DCAF12 NBCH_WD40 WD40_RFWD3 TAF1C_beta-prop eIF2A
Other DBs
NCBI-GeneID: 17358165
NCBI-ProteinID: XP_005850900
JGI: ChlNC64A_1_19464
UniProt: E1Z5R0
LinkDB
Position
Unknown
AA seq 483 aa
MATAEQQHVAWRKLVPYLYDWFASHSLFWPSLACRWGPVLERGPQSNKQRLYLSEQTDGS
EPNRIVLVNVDVVHPRVAAADHLQGFSEHGRSPHVGMPLKTLVHPGEVNRMREVPLHPHV
LVTHTDSPSLYVWNTDTQPDRTGSTSSKQQSVADLVLEGHTEDAKFAVDVSSSAPLVASG
GDDTKVLVWDLDSHSTSLAVSSTASSGPGASTHLDPLHTLSGHSNTVEDVCWCPGSSFEL
ASVGDDYSLLLWDTRRGGAPVLHVASVHGPQDVHCVAWSPHQQEMLVTGAADGSLKLWDR
RKPDSPLFAFHHHDAAVTVVEWSPQQSGIFASAGEDRLLCVWDLQAKATDPESVAAKRQR
SAIPPQMMFQHAGHRAPVVDFQWNPADPWTFFSVADEAGEGGGGTLQLWRVSDLIYRTDD
EVLAELEQYRYVLLVALAHYALGPPCICCLRLQVKPVTNSRLTLNLQGVHHHRPSVGVAW
ATV
NT seq 1452 nt   +upstreamnt  +downstreamnt
atggccaccgctgagcagcagcacgtggcctggcgcaagctggttccctatctatatgat
tggtttgcgagccactcgctgttctggccttccttggcctgccggtgggggccggtgctg
gagcgtgggccgcagagcaacaagcagaggctgtacctgagcgagcagaccgacggcagc
gagcccaacaggattgtgctggtgaatgtggacgtggtgcacccacgtgtcgcagccgcc
gaccacctgcaaggcttctcggagcatggtaggagtccgcatgtgggcatgccgctgaag
actcttgtccaccccggcgaggtgaatcgcatgcgggaggtgccgctgcacccgcacgtc
ttggtcacccacaccgactcgcccagcctctacgtgtggaacaccgacacgcagccagac
aggacggggagcaccagcagcaagcagcagtctgtggcggaccttgttctggaggggcac
acagaggatgccaagtttgcggtggatgttagcagctctgcaccactggtggccagcggt
ggcgacgacaccaaggtgctcgtctgggatttagactcacacagcaccagcctggccgtc
tcctctaccgccagctctggccctggcgccagcacccacctggacccgctgcatacgctg
tcggggcacagcaacacggtggaggatgtgtgctggtgcccaggcagcagcttcgagctg
gccagcgtaggcgacgactactctctcctgttgtgggacacgcggcgcggcggcgcgccc
gtgctgcacgtcgcctctgtgcacggcccgcaggatgtgcactgcgtggcgtggagcccg
caccagcaggagatgctggtcaccggtgcggcagacgggtcgctcaagctgtgggaccgg
cgcaagccagacagccccctctttgccttccaccaccacgacgcggcggtcacggtagtg
gagtggagcccgcagcaatcaggcatctttgccagcgcaggagaggacaggctgctgtgc
gtgtgggacctgcaagccaaggccaccgaccccgagagcgtcgccgcaaagcgccagcgc
agcgcaatcccgccccagatgatgttccagcacgccggccaccgagcaccagtggttgac
ttccagtggaaccccgccgacccctggaccttctttagcgtggctgatgaggccggggag
ggcggcggcggcacgctacagctctggcgcgtcagcgacctcatctaccgcaccgatgat
gaagtgctggcggagctggagcagtataggtatgtactgcttgttgctttggcacactat
gcacttggacccccatgcatctgttgtttgcgtttgcaggtgaaaccagttactaacagc
cgcttaactctcaacctgcagggagttcatcatcaccggccaagtgtcggcgttgcatgg
gcgaccgtctga

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