Chlorella variabilis: CHLNCDRAFT_19464
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Entry
CHLNCDRAFT_19464 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
cvr
Chlorella variabilis
Pathway
cvr03082
ATP-dependent chromatin remodeling
cvr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CHLNCDRAFT_19464
03083 Polycomb repressive complex
CHLNCDRAFT_19464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvr03036
]
CHLNCDRAFT_19464
Chromosome and associated proteins [BR:
cvr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
CHLNCDRAFT_19464
Histone modification proteins
HAT complexes
HATB complex
CHLNCDRAFT_19464
HDAC complexes
Sin3A-HDAC complex
CHLNCDRAFT_19464
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
CHLNCDRAFT_19464
PRC2.2
CHLNCDRAFT_19464
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
CHLNCDRAFT_19464
Heterochromatin formation proteins
Other heterochromatin formation proteins
CHLNCDRAFT_19464
Chromatin remodeling factors
NuRD complex
CHLNCDRAFT_19464
NuRF complex
CHLNCDRAFT_19464
NuRF complex (fruit fly)
CHLNCDRAFT_19464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
EIF3I
MIOS_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF12
NBCH_WD40
WD40_RFWD3
TAF1C_beta-prop
eIF2A
Motif
Other DBs
NCBI-GeneID:
17358165
NCBI-ProteinID:
XP_005850900
JGI:
ChlNC64A_1_19464
UniProt:
E1Z5R0
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MATAEQQHVAWRKLVPYLYDWFASHSLFWPSLACRWGPVLERGPQSNKQRLYLSEQTDGS
EPNRIVLVNVDVVHPRVAAADHLQGFSEHGRSPHVGMPLKTLVHPGEVNRMREVPLHPHV
LVTHTDSPSLYVWNTDTQPDRTGSTSSKQQSVADLVLEGHTEDAKFAVDVSSSAPLVASG
GDDTKVLVWDLDSHSTSLAVSSTASSGPGASTHLDPLHTLSGHSNTVEDVCWCPGSSFEL
ASVGDDYSLLLWDTRRGGAPVLHVASVHGPQDVHCVAWSPHQQEMLVTGAADGSLKLWDR
RKPDSPLFAFHHHDAAVTVVEWSPQQSGIFASAGEDRLLCVWDLQAKATDPESVAAKRQR
SAIPPQMMFQHAGHRAPVVDFQWNPADPWTFFSVADEAGEGGGGTLQLWRVSDLIYRTDD
EVLAELEQYRYVLLVALAHYALGPPCICCLRLQVKPVTNSRLTLNLQGVHHHRPSVGVAW
ATV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgctgagcagcagcacgtggcctggcgcaagctggttccctatctatatgat
tggtttgcgagccactcgctgttctggccttccttggcctgccggtgggggccggtgctg
gagcgtgggccgcagagcaacaagcagaggctgtacctgagcgagcagaccgacggcagc
gagcccaacaggattgtgctggtgaatgtggacgtggtgcacccacgtgtcgcagccgcc
gaccacctgcaaggcttctcggagcatggtaggagtccgcatgtgggcatgccgctgaag
actcttgtccaccccggcgaggtgaatcgcatgcgggaggtgccgctgcacccgcacgtc
ttggtcacccacaccgactcgcccagcctctacgtgtggaacaccgacacgcagccagac
aggacggggagcaccagcagcaagcagcagtctgtggcggaccttgttctggaggggcac
acagaggatgccaagtttgcggtggatgttagcagctctgcaccactggtggccagcggt
ggcgacgacaccaaggtgctcgtctgggatttagactcacacagcaccagcctggccgtc
tcctctaccgccagctctggccctggcgccagcacccacctggacccgctgcatacgctg
tcggggcacagcaacacggtggaggatgtgtgctggtgcccaggcagcagcttcgagctg
gccagcgtaggcgacgactactctctcctgttgtgggacacgcggcgcggcggcgcgccc
gtgctgcacgtcgcctctgtgcacggcccgcaggatgtgcactgcgtggcgtggagcccg
caccagcaggagatgctggtcaccggtgcggcagacgggtcgctcaagctgtgggaccgg
cgcaagccagacagccccctctttgccttccaccaccacgacgcggcggtcacggtagtg
gagtggagcccgcagcaatcaggcatctttgccagcgcaggagaggacaggctgctgtgc
gtgtgggacctgcaagccaaggccaccgaccccgagagcgtcgccgcaaagcgccagcgc
agcgcaatcccgccccagatgatgttccagcacgccggccaccgagcaccagtggttgac
ttccagtggaaccccgccgacccctggaccttctttagcgtggctgatgaggccggggag
ggcggcggcggcacgctacagctctggcgcgtcagcgacctcatctaccgcaccgatgat
gaagtgctggcggagctggagcagtataggtatgtactgcttgttgctttggcacactat
gcacttggacccccatgcatctgttgtttgcgtttgcaggtgaaaccagttactaacagc
cgcttaactctcaacctgcagggagttcatcatcaccggccaagtgtcggcgttgcatgg
gcgaccgtctga
DBGET
integrated database retrieval system