Chlorella variabilis: CHLNCDRAFT_20357
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Entry
CHLNCDRAFT_20357 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cvr
Chlorella variabilis
Pathway
cvr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHLNCDRAFT_20357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvr03041
]
CHLNCDRAFT_20357
Spliceosome [BR:
cvr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CHLNCDRAFT_20357
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
PRP4
Beta-prop_WDR75_1st
NBCH_WD40
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_2nd
Nbas_N
Beta-prop_WDR19_1st
4HBT_3C
WD40_like
Ribosomal_L30
Motif
Other DBs
NCBI-GeneID:
17357481
NCBI-ProteinID:
XP_005850205
JGI:
ChlNC64A_1_20357
UniProt:
E1Z741
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MRKQEELMKEIELRRKMKATVVPTNDQEVRRMLRQLREPITLFGEREMERRDRLRKMLAG
MDEQQAVAALGPPTDFEMAEAELAVAVPSTEVFYTEGSQQLRAARHDVAQFSLRRAALRL
AAARRRRSDPDEDEAAAAAGTERQLRAMANQASEIGDERPIAGCAFSPDGSQLATGAWSG
TLKVWAMPSLTKQLTIKAHTERVTGVAAGRMETGVALASGATDATAKLWSGEGKLLRTLV
GHSDRLGRIAFHPMGRHLGTASFDQTWRLWDVETGSCLLEQEGHSRSVYAVAFQDDGALA
ASGGMDAIARVWDCRTGRNIFTCQGHVKAVLSLDFSPSGYLLATGSEDNTARVWDLRKRA
VLSILPGHTSLISQVRFEPNDGRYLLTAGYDNTSRLWGGRSFRLLRTLAGHEGKVMAADI
SPDGAFTVASGGYDRTIKLYAPDPLADLEEAGGQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagcaggaggagttgatgaaggagattgagctgcggcgcaagatgaaggccaca
gtggtgcccaccaacgaccaggaagtgcggcgcatgttgcggcagctgcgggagcccatc
acgctgtttggggagcgggagatggagcggcgcgaccgcctgcgcaagatgctggctggc
atggacgagcagcaggcggttgcggcgctggggccgcccaccgactttgagatggcagag
gcggagctggcggtggcggtgccctccacggaagtgttctacacagagggcagccagcag
ctgagggcggcgcggcacgacgtggcgcagttctcgctgcgccgtgccgcgctgcggctg
gcagcggcgcggcggcggcggagcgaccccgacgaggacgaggcggctgccgcggcaggc
accgagcgccagctgcgcgccatggcgaaccaggcgtctgagattggcgacgagcggccc
atcgcgggctgcgccttctccccagacggcagccagctggccacgggcgcgtggagcggc
acgctcaaggtctgggccatgccctccctcaccaagcagctcaccatcaaggcccacacc
gagcgcgtcacgggcgtggccgcaggccgcatggagaccggcgtggctcttgcctcgggc
gccaccgatgccaccgccaagctgtggtctggggagggcaagctgctgcgcacgctggtg
gggcacagcgaccggctagggcgcatcgctttccaccccatggggcggcacctaggcaca
gccagctttgaccagacgtggcggctgtgggatgtggagacggggtcgtgcctgctggag
caggagggacacagccggtcggtgtatgctgtggccttccaggacgacggcgcgctggcg
gcgtctggcggcatggacgccatcgcccgcgtgtgggactgccgcaccgggcgcaacatc
ttcacctgccagggccacgtcaaggcggtgctgtcgctggacttcagccccagcggatac
ctgctggccacaggcagcgaggacaacacggccagggtgtgggacctgcgcaagcgggcg
gtgctctccatcctgccgggccacacctctctgatcagccaggtgcggtttgagcccaac
gacggccgctacctgctgaccgccggctacgacaacaccagccggctgtggggcgggcgc
agcttccgcctgctgcgcacgctggcggggcacgagggcaaggtcatggccgcagacatc
tcgcctgacggcgccttcacagtcgcctctggcggctacgaccgcaccatcaagctgtat
gcgcccgacccgctggctgacctggaggaggccggggggcagtga
DBGET
integrated database retrieval system