KEGG   Chlorella variabilis: CHLNCDRAFT_20357
Entry
CHLNCDRAFT_20357  CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cvr  Chlorella variabilis
Pathway
cvr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CHLNCDRAFT_20357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvr03041]
    CHLNCDRAFT_20357
Spliceosome [BR:cvr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    CHLNCDRAFT_20357
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT122_1st PRP4 Beta-prop_WDR75_1st NBCH_WD40 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR75_2nd Nbas_N Beta-prop_WDR19_1st 4HBT_3C WD40_like Ribosomal_L30
Other DBs
NCBI-GeneID: 17357481
NCBI-ProteinID: XP_005850205
JGI: ChlNC64A_1_20357
UniProt: E1Z741
LinkDB
Position
Unknown
AA seq 454 aa
MRKQEELMKEIELRRKMKATVVPTNDQEVRRMLRQLREPITLFGEREMERRDRLRKMLAG
MDEQQAVAALGPPTDFEMAEAELAVAVPSTEVFYTEGSQQLRAARHDVAQFSLRRAALRL
AAARRRRSDPDEDEAAAAAGTERQLRAMANQASEIGDERPIAGCAFSPDGSQLATGAWSG
TLKVWAMPSLTKQLTIKAHTERVTGVAAGRMETGVALASGATDATAKLWSGEGKLLRTLV
GHSDRLGRIAFHPMGRHLGTASFDQTWRLWDVETGSCLLEQEGHSRSVYAVAFQDDGALA
ASGGMDAIARVWDCRTGRNIFTCQGHVKAVLSLDFSPSGYLLATGSEDNTARVWDLRKRA
VLSILPGHTSLISQVRFEPNDGRYLLTAGYDNTSRLWGGRSFRLLRTLAGHEGKVMAADI
SPDGAFTVASGGYDRTIKLYAPDPLADLEEAGGQ
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgcgcaagcaggaggagttgatgaaggagattgagctgcggcgcaagatgaaggccaca
gtggtgcccaccaacgaccaggaagtgcggcgcatgttgcggcagctgcgggagcccatc
acgctgtttggggagcgggagatggagcggcgcgaccgcctgcgcaagatgctggctggc
atggacgagcagcaggcggttgcggcgctggggccgcccaccgactttgagatggcagag
gcggagctggcggtggcggtgccctccacggaagtgttctacacagagggcagccagcag
ctgagggcggcgcggcacgacgtggcgcagttctcgctgcgccgtgccgcgctgcggctg
gcagcggcgcggcggcggcggagcgaccccgacgaggacgaggcggctgccgcggcaggc
accgagcgccagctgcgcgccatggcgaaccaggcgtctgagattggcgacgagcggccc
atcgcgggctgcgccttctccccagacggcagccagctggccacgggcgcgtggagcggc
acgctcaaggtctgggccatgccctccctcaccaagcagctcaccatcaaggcccacacc
gagcgcgtcacgggcgtggccgcaggccgcatggagaccggcgtggctcttgcctcgggc
gccaccgatgccaccgccaagctgtggtctggggagggcaagctgctgcgcacgctggtg
gggcacagcgaccggctagggcgcatcgctttccaccccatggggcggcacctaggcaca
gccagctttgaccagacgtggcggctgtgggatgtggagacggggtcgtgcctgctggag
caggagggacacagccggtcggtgtatgctgtggccttccaggacgacggcgcgctggcg
gcgtctggcggcatggacgccatcgcccgcgtgtgggactgccgcaccgggcgcaacatc
ttcacctgccagggccacgtcaaggcggtgctgtcgctggacttcagccccagcggatac
ctgctggccacaggcagcgaggacaacacggccagggtgtgggacctgcgcaagcgggcg
gtgctctccatcctgccgggccacacctctctgatcagccaggtgcggtttgagcccaac
gacggccgctacctgctgaccgccggctacgacaacaccagccggctgtggggcgggcgc
agcttccgcctgctgcgcacgctggcggggcacgagggcaaggtcatggccgcagacatc
tcgcctgacggcgccttcacagtcgcctctggcggctacgaccgcaccatcaagctgtat
gcgcccgacccgctggctgacctggaggaggccggggggcagtga

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