Chlorella variabilis: CHLNCDRAFT_20778
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Entry
CHLNCDRAFT_20778 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
cvr
Chlorella variabilis
Pathway
cvr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHLNCDRAFT_20778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvr03000
]
CHLNCDRAFT_20778
03021 Transcription machinery [BR:
cvr03021
]
CHLNCDRAFT_20778
Transcription factors [BR:
cvr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
CHLNCDRAFT_20778
Transcription machinery [BR:
cvr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CHLNCDRAFT_20778
RNA polymerase III system
TFIIIB
CHLNCDRAFT_20778
RNA polymerase I system
SL1/TIF-1B
CHLNCDRAFT_20778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF5757
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
17356815
NCBI-ProteinID:
XP_005849935
JGI:
ChlNC64A_1_20778
UniProt:
E1Z9U2
LinkDB
All DBs
Position
Unknown
AA seq
209 aa
AA seq
DB search
MAEAGPSNAVVAAAEPEVDLSIHPSGIVPQLQNVVATVNLECKLDLKNIALHARNAEYNP
KRFAAVIMRIREPKSTALIFHSGKMVCTGTKSEQEARIASRKYAKILQKLQYSVSFKEFK
IQNMVGSCDVKFPIRLEGLASTHAVFCSYEPELFPGLIYRMADPKIVLLIFVSGKVVLTG
AKKREDIYRAFENIYPVLQTFRKGGEFCV
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgggccccagcaacgcggtggtggcggcggcagagccagaggtggacctg
agcatccaccccagcggcatcgtgccgcagctgcagaacgtggtggcgactgtgaacctg
gagtgcaagctggacctgaagaacatcgcgctccacgcccgcaacgccgagtacaacccc
aagcgctttgccgccgtcatcatgcgcatccgcgagcccaagtccaccgcgctcatcttc
cactcgggcaagatggtgtgcacggggaccaagagcgagcaggaggcgcgcatcgcgtcc
cgcaagtacgccaagatcctgcagaagctgcagtactcggtgtcgttcaaggagttcaag
atccagaacatggtgggcagctgcgacgtgaagttccccatccgcctggagggcctggcc
agcacgcacgccgtgttctgcagctatgagccggagctgttcccgggcctcatctaccgc
atggccgaccccaagattgtgctgctcatctttgtcagcggcaaggtggtgctgactggc
gccaagaagcgcgaggacatctaccgcgcctttgaaaacatctaccccgtgctgcagacg
ttccgcaaaggcggtgagttttgtgtttga
DBGET
integrated database retrieval system