Chlorella variabilis: CHLNCDRAFT_21126
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Entry
CHLNCDRAFT_21126 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cvr
Chlorella variabilis
Pathway
cvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHLNCDRAFT_21126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvr03019
]
CHLNCDRAFT_21126
Messenger RNA biogenesis [BR:
cvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CHLNCDRAFT_21126
mRNA degradation factors
5'-3' decay
Lsm complex
CHLNCDRAFT_21126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
17357020
NCBI-ProteinID:
XP_005849546
JGI:
ChlNC64A_1_21126
UniProt:
E1Z928
LinkDB
All DBs
Position
Unknown
AA seq
112 aa
AA seq
DB search
MVCSSTAAPLQLRDGRKIIGTLCSFDQFANLVLSGAKERIIVGQQYSEIPLGLHVVRGEN
VVLLGQLDAAREPPPGLELVTEAAIKQAQRAEREAEKMKGLILARFDFLSDI
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggtctgttcttccactgccgcacccctgcagttgcgtgacggacgcaaaatcataggc
acgctgtgctcatttgaccaatttgccaacttggtgttgtcaggcgccaaggagcgcatc
atagtggggcagcagtactcggagatcccgctgggcctgcatgttgtcaggggcgagaac
gtcgtattgctggggcagctggatgcagcaagagagccgccgccaggcctggagttggtc
accgaggcggccatcaagcaggcgcagcgggcggagcgcgaggcagagaagatgaagggg
ctcattcttgcacgctttgacttcctttcagacatttga
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integrated database retrieval system