KEGG   Chlorella variabilis: CHLNCDRAFT_21126
Entry
CHLNCDRAFT_21126  CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
cvr  Chlorella variabilis
Pathway
cvr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CHLNCDRAFT_21126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvr03019]
    CHLNCDRAFT_21126
Messenger RNA biogenesis [BR:cvr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CHLNCDRAFT_21126
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     CHLNCDRAFT_21126
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 17357020
NCBI-ProteinID: XP_005849546
JGI: ChlNC64A_1_21126
UniProt: E1Z928
LinkDB
Position
Unknown
AA seq 112 aa
MVCSSTAAPLQLRDGRKIIGTLCSFDQFANLVLSGAKERIIVGQQYSEIPLGLHVVRGEN
VVLLGQLDAAREPPPGLELVTEAAIKQAQRAEREAEKMKGLILARFDFLSDI
NT seq 339 nt   +upstreamnt  +downstreamnt
atggtctgttcttccactgccgcacccctgcagttgcgtgacggacgcaaaatcataggc
acgctgtgctcatttgaccaatttgccaacttggtgttgtcaggcgccaaggagcgcatc
atagtggggcagcagtactcggagatcccgctgggcctgcatgttgtcaggggcgagaac
gtcgtattgctggggcagctggatgcagcaagagagccgccgccaggcctggagttggtc
accgaggcggccatcaagcaggcgcagcgggcggagcgcgaggcagagaagatgaagggg
ctcattcttgcacgctttgacttcctttcagacatttga

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