Chlorella variabilis: CHLNCDRAFT_23208
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Entry
CHLNCDRAFT_23208 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cvr
Chlorella variabilis
Pathway
cvr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CHLNCDRAFT_23208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvr03019
]
CHLNCDRAFT_23208
Enzymes [BR:
cvr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CHLNCDRAFT_23208
Messenger RNA biogenesis [BR:
cvr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
CHLNCDRAFT_23208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
17355154
NCBI-ProteinID:
XP_005847622
JGI:
ChlNC64A_1_23208
UniProt:
E1ZEM3
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MASRRPFVEPISQAEPTPQDLKHTRDLEQHLRDQGLYESQEEAELREVVLGRLDGLVKEW
IRGVAALRGHPPEDANAKIFTFGSYRLGVHGPGADIDTLCVGPSYATREGDFFGSEPHCL
QAMLCALPEVLALRAVTAAYVPVMEMKFCGISIDLLYARLSVPLVREDLDIGATHTLRHC
DDQSVRSLNGCRVTDMILREVPSVPHFRTALRCLKLWAERRGVYSNVTGYLGGVNWAILV
AYVCKLQPCLLASPPHLGPAPCLPVPQVYSQWAWPTPIMLRAIERDPSLAMPVWDPRENP
RDRTHLMPIITPAYPCMNSSYNVSECTLAVMAEEFRRGDEVCGRIMTHNGSGLTDWAQLL
EPLPFFEGFKHFLQVEVMASSQEDFEVWEGWVHSRMRLLIKVDQQQQQQQQQQDGGGGGS
VADPPAQQQPRCFYFMGLSKKKAMIIPQSKVDLTQPVNEFAHKVKEFEQRREGMDISVRH
LLQRQLPEWVRPAPNNGGGAPAAADGGDAAAATATAAAPADGHDAAAAAAAAAKQQPQQL
AGSKRVSEAGEGGGPAAAKRQQTGEGVALTAAAAAVAAAAAAAAAEGATQPPSGDTSDLQ
MEDLQQQQLGEDGQQEVEDWAEGPARAAPAAA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcggcggccattcgtggagcctatcagccaggccgagcccaccccgcaggac
ttgaagcacacccgggacctggagcagcacctgcgcgaccagggcctgtacgagtcccag
gaggaggcggagctgcgggaggtggtgctggggcggctggacgggctggtcaaggagtgg
attcgcggcgtggcggcgctgcgggggcaccctccggaggatgccaacgccaagatattc
acctttggctcctaccgcctgggcgtgcacggccccggggcagacatcgacacgctgtgc
gtggggcccagctatgccacgcgcgagggcgacttcttcggcagcgagccgcactgcctg
caggccatgctgtgcgcgctgcccgaggtgctggcgctgcgcgccgtcaccgccgcctac
gtgcccgtcatggaaatgaagttctgcggcatctccatcgacctgctgtacgcgcgcctg
tcggtaccgctggtacgggaggatttggacatcggcgccacccacaccctgcgccactgc
gacgaccagtctgtgcgctcgctcaacggctgccgcgtgacagacatgatcctgcgcgag
gtgcccagcgtgccgcacttccgcaccgcgctgcgctgcctcaagctgtgggcggagcgg
cgcggcgtttactcaaacgttaccggctacctggggggcgtgaactgggcgatcctggtg
gcctatgtctgcaagctccaaccatgtctgcttgcctccccgccccacctcggccccgcc
ccctgcctgcccgtaccgcaggtgtacagccaatgggcgtggcccacgcccatcatgcta
cgcgccattgagcgcgacccctctctggccatgcctgtgtgggatcctcgggagaacccg
cgggaccgcacccacctcatgcccatcatcacccccgcatacccctgcatgaactcctca
tacaatgtgtcggaatgcacgctggcggtgatggcagaagagttccgcaggggcgacgag
gtgtgcgggcgcatcatgactcacaacggctcgggcctcacagactgggcccagctgctg
gagccgctgcctttcttcgagggcttcaagcacttcctgcaggtggaggtgatggcgtcc
agccaggaggactttgaggtgtgggaggggtgggtgcactcccgcatgcgcctcctcatc
aaggtggaccagcagcagcagcagcagcagcagcagcaggacggcggcggcggcggcagc
gtggccgacccgccggcgcagcagcagccccgctgcttttacttcatggggctcagcaag
aagaaggccatgatcatccctcagtccaaggtcgacctcacccagcccgtcaacgagttt
gcccacaaggtgaaagagtttgagcagcggcgggaaggcatggacatcagcgtgcggcac
ctgctgcagcgccagctccccgaatgggtgcgccccgcgcccaacaacggcggcggcgcg
ccagccgcggcggatgggggcgacgcagcggcggcgacggcaaccgcggcggcgcccgcc
gacgggcacgacgcggcggcggcggcggcggcggcggccaagcagcagccacagcagctt
gcgggcagcaagcgggtgtcggaggccggggagggaggcggcccggcggcggccaagcgg
cagcagacgggggaaggggtggcgcttacggcggccgccgcggcggtggcggcggcggcg
gcggcggcggcggctgaaggcgcgacgcagccgccgtctggcgacacctcggacctccag
atggaggacctccagcagcagcagctgggcgaggatgggcagcaggaggttgaggactgg
gccgagggccctgctcgcgccgcgcctgccgccgcctga
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