KEGG   Chlorella variabilis: CHLNCDRAFT_23906
Entry
CHLNCDRAFT_23906  CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K14298  mRNA export factor
Organism
cvr  Chlorella variabilis
Pathway
cvr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CHLNCDRAFT_23906
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvr03019]
    CHLNCDRAFT_23906
   03036 Chromosome and associated proteins [BR:cvr03036]
    CHLNCDRAFT_23906
Messenger RNA biogenesis [BR:cvr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CHLNCDRAFT_23906
Chromosome and associated proteins [BR:cvr03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    CHLNCDRAFT_23906
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_ELP1_1st Beta-prop_WDR19_1st WD40_like Beta-prop_RSE1_2nd Beta-prop_IFT122_1st VPS11_N
Other DBs
NCBI-GeneID: 17354433
NCBI-ProteinID: XP_005847170
JGI: ChlNC64A_1_23906
UniProt: E1ZH67
LinkDB
Position
Unknown
AA seq 376 aa
MAAFGTSIPFGSAAAAANTNPNKDLEVPNAPSDGISSLRFSPASNLMVATSWSGQVLCWD
VQATTGQAIPKAATTLDKPVLCSAWSADGSTVFAGGCDNGVKMWNLGTNQQQQVAQHAAP
VRHCFFMRQMNMLVTGSWDKTVKYWDLRSPTPAHTQPMPERVYAMDVRDELMVVGTADRQ
LQVFNLGTPGQVYKSLASPLKYQTRCIACFPDKTGYLLGSIEGRVAVHHVEDALQSKNFT
FKCHREGQDVYAVNHMAFHPQFGTFVTAGSDGAYNFWDKDSKQRLKAMAKCGMPIPCGDF
NRRAPAPRALRLQGRPCTRLLHLAQDGSIYAYAVSYDWSRGYSEYNPTTAKNQIFLHAPQ
ESEVKGRTRPAAGARR
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggccgcctttggcacgtccattccgttcggctccgcggccgcggccgccaacaccaac
cccaacaaggacctggaggtgcccaacgccccctctgacggcatcagcagcctcaggttc
agccccgccagcaacctgatggtagccacgtcgtggagcgggcaggtgctgtgctgggac
gtgcaggccaccaccgggcaggccatcccgaaggcggccaccacgctggacaagccggtc
ctgtgcagcgcgtggagcgcggacggcagcacggtgtttgcaggcgggtgcgataacggc
gtcaagatgtggaacctgggcaccaaccagcagcagcaggtggcgcagcacgccgcgccc
gtgcgccactgcttcttcatgcgccagatgaacatgctggtgacggggagctgggacaag
acggtcaagtactgggacctgcgcagccccaccccggcgcacacgcagcccatgccggag
cgggtgtacgccatggatgtgcgggatgagctcatggtggtgggcaccgcggacaggcag
ctgcaggtgttcaacctgggcaccccggggcaggtgtacaagtccctggcctcgccgctc
aagtatcagacccgctgcatcgcctgcttccccgacaagacgggatacctgctgggcagc
atcgaggggcgggtggcggtgcaccacgtggaggatgccctgcagtccaagaacttcacc
ttcaagtgccacagggaggggcaggacgtgtatgcggtcaaccacatggccttccacccc
cagtttggcacctttgtcaccgccggctccgacggcgcctacaacttctgggacaaggac
tccaagcagcgcctcaaggccatggctaagtgcggcatgcccatcccctgcggcgacttc
aacaggcgcgcgccggcgccgcgggcgctgcggctgcagggccggccatgcacgcgcctg
ctgcacctcgcccaggacggcagcatctacgcgtacgcggtcagctacgactggtcccgc
ggctacagcgagtacaaccccaccaccgccaagaaccagatcttcctgcacgcgccgcag
gagtcggaggtgaaggggcgcacccgccccgccgcgggcgcgcggcggtga

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