KEGG   Chlorella variabilis: CHLNCDRAFT_24755
Entry
CHLNCDRAFT_24755  CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
cvr  Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvr03041]
    CHLNCDRAFT_24755
Spliceosome [BR:cvr03041]
 Complex B
  Other components
   Complex B specific factors
    CHLNCDRAFT_24755
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Ge1_WD40 LisH_TPL Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_EIPR1 WD_LRWD1 Beta-prop_WDR19_1st Beta-prop_VPS8 DUF7165 WD40_RFWD3 Beta-prop_WDR11_1st VPS8_N Cytochrom_D1 PROPPIN Beta-prop_WDR11_2nd zf_topless Baculo_RING
Other DBs
NCBI-GeneID: 17353707
NCBI-ProteinID: XP_005846379
JGI: ChlNC64A_1_24755
UniProt: E1ZJ49
LinkDB
Position
Unknown
AA seq 505 aa
SVIKIILQFCKENSLAESFNAIQNECQVSLNTVDSIESFVSDINNGRWDLVLPQVANLKL
PRAKLEDLYEQVVLELIELRETDTARAMLRQTQVFARMKGDDAERYLRLEHLCNRAYFDA
RELYGGTPRDKRRAQLAHSLSSEVSTVPPSRLMALVGQALKWQQQQGMLPPGAAFDLFRG
TAAGARDEVETFPADLDRQIKFGVKSHAECAAFSPDGQLLVTGSVDGFVEVWDHLTGRLK
LDLPYQAEEQFMLHDSAVLAAAFSRDSELLATGDQDGRVKVWRVRTGQCLRRFDSAHSQG
VTSLAFSRDGTHVLSASYDTLVRVHGIKSGRMLKEFRGHSSFVNAAVYSADGTQVVSAGA
DATVRVWDAKTCDCTFVFRPPQASATAEAPVVGVALNPQNVDQVLVATRSPSLYLMTLQG
QVVKSFQSGKKSGGDFLAFTLSPRGEWAYCLGEDGVLYCLSMAAGKLEHLMQASHKKDPI
GLAHHPHRNLLATFAADGTLKTWKP
NT seq 1518 nt   +upstreamnt  +downstreamnt
agcgtgatcaagatcattttacagttttgcaaggagaactcgctggcggagtcgttcaac
gcaatccagaatgagtgccaagtgtcgctcaacacggtggacagtatcgagagctttgtg
tccgacatcaacaatgggcggtgggacctggtgctaccgcaagtggctaacctgaagctg
cctcgtgccaagctggaggacctgtacgagcaggtggtgctggagctgattgagctgcgt
gagacagacacggcacgcgccatgctgcgccagacccaggtgtttgcccgcatgaagggc
gacgacgcggagcgctacctgcgcctggagcacctgtgcaaccgcgcctactttgatgcg
cgggagctgtatggcggcacgccccgcgacaagcggcgcgcccagctggcgcactcgctg
agcagcgaggtcagcacggtgccaccatcgcggctcatggcgctggtaggccaggcgctc
aagtggcagcagcagcagggcatgctcccgccgggggccgcctttgatctgttccgcggc
acggcagcaggggcgcgggacgaggtggagaccttccccgccgacctcgaccgacagatc
aagtttggggtcaagagccacgcagaatgcgccgccttctcgcccgacggccagctgctg
gtcaccggcagcgtggacggctttgtggaggtgtgggatcacctgaccgggcggctgaag
ctggacctgccataccaggcggaggagcagttcatgctgcacgactccgccgtgctggcc
gccgccttctcccgcgacagcgagctgctggccaccggcgaccaggacgggcgggtcaag
gtgtggcgcgtgcgcacggggcagtgcctgcgccgcttcgactcggcgcactcccagggc
gtcacctcgctggccttctcgcgcgacggcacccacgtgctgtccgcctcgtacgacacg
ctcgtcagggtgcacggcatcaagagcggcaggatgctcaaggagttccgcggccacagc
tcctttgtcaatgccgccgtctactcggcagacggcacgcaggtggtgagcgcgggggcg
gatgccacggtgcgcgtgtgggacgccaagacctgcgactgcacctttgtcttccgcccg
ccccaggccagcgccaccgccgaggcgccggtggtgggcgtggcgctcaacccccagaat
gtggaccaggtgctggtggccacgcgctccccatccctctacctcatgacgctgcaggga
caggttgtgaagagcttccagtcgggcaagaagtcgggcggcgacttcctggcgttcacg
ctgtcgccgcgcggcgagtgggcctactgcctgggcgaggacggcgtgctctactgcttg
tccatggcggccggcaagctggagcacctgatgcaggccagtcacaagaaggaccccatt
ggcttggcgcaccacccgcaccgcaacctgctggcaacctttgcagcggatggcacgctt
aagacgtggaaaccttga

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