Chlorella variabilis: CHLNCDRAFT_30275
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Entry
CHLNCDRAFT_30275 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvr03016
]
CHLNCDRAFT_30275
Enzymes [BR:
cvr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CHLNCDRAFT_30275
Transfer RNA biogenesis [BR:
cvr03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
CHLNCDRAFT_30275
Prokaryotic type
Methylthiotransferases
CHLNCDRAFT_30275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Lipase_GDSL_2
Motif
Other DBs
NCBI-GeneID:
17357106
NCBI-ProteinID:
XP_005849462
JGI:
ChlNC64A_1_30275
UniProt:
E1Z8L9
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MLVAAAVQRAAGSPCSTSGRAAASCVPRGVRRCRNARLLVRSSALEQLAPPPIDEEEDAL
FCGVEGQVLSRPALAGGSGKKYHIITFGCQMNSADSERMAGCLEEAGYRCVEEAGHADVL
VYNTCSIREKAELKLYSALGRQAKRKRQHMGDLKIVVAGCVAAQEGHALLRRVPEVDLVM
GPHHANRIGDLLEQVEAGSQVVAVEHAPIEEDITAPRRDSAITAWVNVIHGCNEKCTYCI
VPFTRGQEQSRTPEAIRREMLSLGEAGYREVTLLGQNVDAYGRDLPGFAPDNSGRRAWTF
NDLLRHVHDVPGIARIRFATSHPRYFTERLIRACAELDKLCEFFHVPFQSGDNYILREMK
RGYTHERYREMVHTIRRHMPDASISGDAIVGFPGESEEQFERTVALVEEVGFDRVNTAAY
SPRPGTPAAVWDGQVADLVKADRLNRLNAVVNRVAEERAQRFLGRELEVLVEGPNPRDPA
QAVGRTRHNKLLYFAGDGEALRGQLVDVRVDRVHAYTLYGSMAG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgctagtcgctgcggctgtgcagcgggcggcagggagcccctgctccacaagtgggcgc
gctgcggcctcctgcgtgccccgtggcgtgaggaggtgcaggaatgcgcggctgctcgtg
cgctcctcagccctggagcagctggcgccaccaccgatcgacgaggaggaggatgccctg
ttctgtggtgtcgagggccaggtcctgtcccgccccgcgctggctggcggcagcggcaag
aagtaccacatcatcacctttggctgccagatgaacagcgccgactcggagcgcatggcc
gggtgcctggaggaggcggggtaccgctgcgtggaggaggcggggcacgcggacgtgctg
gtgtacaacacgtgcagcatccgggagaaggcggagctgaagctgtactccgctctgggg
cggcaggccaagcgcaagcgccagcacatgggcgacctcaagattgtggtggcggggtgc
gtggcggcgcaggaggggcacgccctgctgcgccgcgtgcccgaggtcgacctggtcatg
gggccccaccacgccaaccgcatcggcgacctgctggagcaggtggaggcggggagccag
gtggtggcggtggagcacgcgcccatagaggaggacatcacggcgccgcgacgcgactca
gcaatcacagcctgggtcaacgtcattcacgggtgcaacgaaaagtgcacctactgcatc
gtgcccttcacgcgcggccaggagcagagccgcacccccgaggccatccggcgcgagatg
ctgtccctgggggaggcggggtaccgcgaggtgacgctgctggggcagaacgtggacgcc
tacggccgagacctgcccggctttgcgcccgacaactcggggcgccgcgcctggaccttc
aatgacctgctgcgacacgtgcacgacgtgccaggcatcgcgcgcatccgctttgccacc
tcccacccccgctacttcacggagcgcctcatcagggcatgcgccgagctggacaagctc
tgcgagttcttccacgtgcccttccagtcgggggacaactacatcctgcgggagatgaag
cgaggctacacccacgagcggtaccgcgagatggtgcacaccatccggcgccacatgccc
gacgcctccatcagcggcgacgccatcgtggggttccccggggagagcgaggagcagttt
gagcgcacggtggcgctggtggaggaggtggggttcgacagggtcaacaccgccgcctac
tcgccgcggccgggcacccccgccgccgtgtgggacggccaggtggcggacctggtgaag
gcggaccgcctcaaccgcctgaatgcggtggtgaaccgtgtggcggaggagcgggcgcag
cggttcctgggcagggagctggaggtgttggtggaggggcccaacccgcgcgacccggcg
caggcggtggggcgcacgcggcacaacaagctgctctactttgccggcgacggcgaggcg
ctgcgggggcagctggtggatgtgcgggtggaccgcgtgcatgcctacacgctgtacggc
agcatggcggggtga
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