Chlorella variabilis: CHLNCDRAFT_33380
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Entry
CHLNCDRAFT_33380 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K12876
RNA-binding protein 8A
Organism
cvr
Chlorella variabilis
Pathway
cvr03013
Nucleocytoplasmic transport
cvr03015
mRNA surveillance pathway
cvr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHLNCDRAFT_33380
09122 Translation
03013 Nucleocytoplasmic transport
CHLNCDRAFT_33380
03015 mRNA surveillance pathway
CHLNCDRAFT_33380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvr03019
]
CHLNCDRAFT_33380
03041 Spliceosome [BR:
cvr03041
]
CHLNCDRAFT_33380
Messenger RNA biogenesis [BR:
cvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CHLNCDRAFT_33380
Spliceosome [BR:
cvr03041
]
Complex C
Other components
EJC/TREX
CHLNCDRAFT_33380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
17350177
NCBI-ProteinID:
XP_005842863
JGI:
ChlNC64A_1_33380
UniProt:
E1ZTW4
LinkDB
All DBs
Position
Unknown
AA seq
139 aa
AA seq
DB search
MDVDRPRGGARKQKGRGFREPMELEDRLQGGQFEALPSDKAGPGPAKSVEGWVVLVTGVH
EEAQEEDVHDAFAEFGDVKNIYMNLDRRTGFVKGYALVEYGTKQEAQAAIEEMEGKELLT
QIVHVTWAFSSGPIRRARR
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgaccggccgcgcggcggggcccgcaagcagaagggccgcggcttccgggag
ccgatggagcttgaggaccggctgcagggcggccagtttgaggcgctgccctcggacaag
gccgggcccggccccgcgaaatccgtggagggctgggtggtgctggtgactggggtgcac
gaggaggcgcaagaggaggacgtgcacgacgcctttgcagagtttggcgacgtgaagaac
atctacatgaacctggaccgccgcaccggctttgtcaagggctacgcgctcgtcgagtac
ggcaccaagcaggaggcgcaggctgccattgaggagatggagggcaaggagctgctcacg
cagattgtgcacgtgacgtgggcgttcagcagcggccccatccgccgcgcacggcgatga
DBGET
integrated database retrieval system