KEGG   Chlorella variabilis: CHLNCDRAFT_33380
Entry
CHLNCDRAFT_33380  CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K12876  RNA-binding protein 8A
Organism
cvr  Chlorella variabilis
Pathway
cvr03013  Nucleocytoplasmic transport
cvr03015  mRNA surveillance pathway
cvr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CHLNCDRAFT_33380
  09122 Translation
   03013 Nucleocytoplasmic transport
    CHLNCDRAFT_33380
   03015 mRNA surveillance pathway
    CHLNCDRAFT_33380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvr03019]
    CHLNCDRAFT_33380
   03041 Spliceosome [BR:cvr03041]
    CHLNCDRAFT_33380
Messenger RNA biogenesis [BR:cvr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CHLNCDRAFT_33380
Spliceosome [BR:cvr03041]
 Complex C
  Other components
   EJC/TREX
    CHLNCDRAFT_33380
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 17350177
NCBI-ProteinID: XP_005842863
JGI: ChlNC64A_1_33380
UniProt: E1ZTW4
LinkDB
Position
Unknown
AA seq 139 aa
MDVDRPRGGARKQKGRGFREPMELEDRLQGGQFEALPSDKAGPGPAKSVEGWVVLVTGVH
EEAQEEDVHDAFAEFGDVKNIYMNLDRRTGFVKGYALVEYGTKQEAQAAIEEMEGKELLT
QIVHVTWAFSSGPIRRARR
NT seq 420 nt   +upstreamnt  +downstreamnt
atggacgtcgaccggccgcgcggcggggcccgcaagcagaagggccgcggcttccgggag
ccgatggagcttgaggaccggctgcagggcggccagtttgaggcgctgccctcggacaag
gccgggcccggccccgcgaaatccgtggagggctgggtggtgctggtgactggggtgcac
gaggaggcgcaagaggaggacgtgcacgacgcctttgcagagtttggcgacgtgaagaac
atctacatgaacctggaccgccgcaccggctttgtcaagggctacgcgctcgtcgagtac
ggcaccaagcaggaggcgcaggctgccattgaggagatggagggcaaggagctgctcacg
cagattgtgcacgtgacgtgggcgttcagcagcggccccatccgccgcgcacggcgatga

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