KEGG   Chlorella variabilis: CHLNCDRAFT_48527
Entry
CHLNCDRAFT_48527  CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
cvr  Chlorella variabilis
Pathway
cvr03030  DNA replication
cvr03410  Base excision repair
cvr03420  Nucleotide excision repair
cvr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CHLNCDRAFT_48527
   03410 Base excision repair
    CHLNCDRAFT_48527
   03420 Nucleotide excision repair
    CHLNCDRAFT_48527
   03430 Mismatch repair
    CHLNCDRAFT_48527
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cvr03032]
    CHLNCDRAFT_48527
   03036 Chromosome and associated proteins [BR:cvr03036]
    CHLNCDRAFT_48527
   03400 DNA repair and recombination proteins [BR:cvr03400]
    CHLNCDRAFT_48527
DNA replication proteins [BR:cvr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CHLNCDRAFT_48527
  DNA Replication Termination Factors
   ELG1-RFC complex
    CHLNCDRAFT_48527
Chromosome and associated proteins [BR:cvr03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    CHLNCDRAFT_48527
DNA repair and recombination proteins [BR:cvr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CHLNCDRAFT_48527
  Check point factors
   HRAD17(Rad24)-RFC complex
    CHLNCDRAFT_48527
SSDB
Motif
Pfam: AAA DNA_pol3_delta2 Rep_fac_C AAA_22 Rad17 AAA_16 RuvB_N Mg_chelatase AAA_11 AAA_14 AAA_30 ResIII AAA_24 SLFN-g3_helicase AAA_5 AAA_25 nSTAND3 NPHP3_N AAA_2 AAA_7 AAA_28 NB-ARC ATPase_2 RFC_C RNA_helicase T2SSE
Other DBs
NCBI-GeneID: 17357836
NCBI-ProteinID: XP_005850558
JGI: ChlNC64A_1_48527
UniProt: E1Z5E8
LinkDB
Position
Unknown
AA seq 293 aa
MAHQPWVEKYRPRSIGEVAHQEEVVQTLQHALSSGNLPHLLFYGPPGTGKTTSALAIVRQ
LFGPELCKARVLELNASDERGIGVVRDKIKNFAANSVGQGVAGYPCPPFKVIILDEADSM
TGDAQNALRRTMETYSRVTRFVFICNYVSRIIEPLASRCAKFRFKPLQGDVINERINHIC
AGAAGGGCRHILDVSGSVPPSAAQGLLAAARSPQFARVQAAVTDLIADGYPAQEILLQLQ
AALLQDAGAADSAKGKILVRLSEADKSLVDGSDEFLQLLGAASYAQRVLAGQA
NT seq 882 nt   +upstreamnt  +downstreamnt
atggcccatcagccctgggttgagaaataccgcccacggagcataggagaggtggcccat
caggaggaggtggtgcagacgctgcaacacgccctgtcgtccggcaacctgccccacctg
ctcttctacggccctcccggcaccggcaagaccaccagcgcgctggccatcgtgcgccag
ctgtttggccccgagctgtgcaaggcgcgcgtgctggagctgaacgcatctgacgagcgc
ggcatcggcgtggtgcgggacaagatcaagaactttgcggccaacagcgtggggcagggc
gtggcgggctacccctgcccgcccttcaaagtcatcatccttgacgaggccgactcgatg
acgggggacgcccagaatgcgctgcgccgcaccatggagacctacagccgggtcacgcgc
tttgtcttcatctgcaactacgtgtctcgcatcatcgagccgctggcctcgcgctgcgcc
aagttccgcttcaagccgctgcagggggacgtcatcaacgaacgcatcaaccacatatgc
gcgggtgcggctgggggtgggtgccgccacatcctggatgtgtcggggtcggtgccgccg
tctgcggcgcagggcctgctggcggcggcgcgctcgccgcagtttgcgcgcgtgcaggcg
gcggtgacggacctgatcgccgacggctacccggcgcaggagatcctgctgcagctgcag
gcggcgctgctgcaggatgcaggggcggcagactcggccaagggcaagatcctggtgcgg
ctgagcgaggcggacaagagcctggttgacggcagcgacgagttcctgcagctgctgggg
gcggcctcgtacgcgcagcgcgtgctggccgggcaggcgtga

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