Chlorella variabilis: CHLNCDRAFT_49671
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Entry
CHLNCDRAFT_49671 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K14318
nuclear pore complex protein Nup88
Organism
cvr
Chlorella variabilis
Pathway
cvr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CHLNCDRAFT_49671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvr03019
]
CHLNCDRAFT_49671
Messenger RNA biogenesis [BR:
cvr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CHLNCDRAFT_49671
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
DUF3135
phiKZ_IP
DASH_Spc34
Mis12
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
17359480
NCBI-ProteinID:
XP_005852248
JGI:
ChlNC64A_1_49671
UniProt:
E1Z3D0
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MEPLFAGALFAYEDEEPQAELRGIMAYSGSGRLYVVGDDGKIKAADVRQQLLSGAWAQGG
AAGTAPPPSLRTITASPPLELTAAHCGLNRSGTYAAVAGSALEDPEISRVVVIDLANCRP
APGSPASGGAARHDLCDAVVLDAELFASRPGLRVLQVGWHPDSDAHLAVLTSGEPGACCR
CRPPVARGDDNTWRLYNTQHAGLAEQTFELQLRSRRGLGLGGAGSGAGGAGRAAVAFSFG
PPELWQRFSLYFLTGDGSLWCLCPVVPFGCRYSTSTIEQLEGAADAGGSGAGGEVDFGTA
PNAQAWLQRAFQLLATPQDPAFGSGMMQSVPHALDEHVPALAGPLPVASAAGEEQREGGS
LLTRMAGSGDAAQALLLSRFSEGCTAVAVATARGFLGLHLLAGFGGGAAPAWCESAPQCV
SEGLEIQAVRSQVGVVPTGSGQPALLLLDVVNLSLPPPDGASAAAADEDDDGEVLAIGGG
TSAASVALLPDAVAPEVLYAVHCSAAHAITLSWLPLLAGLLEEVGGARLPAALPQPAAEL
LMRSGAGVAAAAAVGDTLSGSALVVLEADGKPRCLRPHRADATAAAGGAGGGGAASAAAA
SAPAGGSAAQRDVEAQLATIYGDLRKGPKPCELPQAAAGRAAGAGNLEGQRLLNEAAAAL
RASHVEFAHQAHQDLTERMRQLQAEIDGQRRRLEDAEAAAAAAEQAAAALDAKAARVQQF
QGNLGERLRLLAELHWALPRPPSRAERRFADEQLPAFEAAATALEEDARALRTRVSLLQR
KLRSVGQVAAGAAALGGGTAAAVLPPHQLRRVREALAEQEQQIGANQQRLSVLEEAAAVA
AAVHG
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggaacccctttttgctggagcgctgtttgcttacgaggatgaggagccacaggccgag
ctgcgcggcatcatggcctacagcggctccggcaggctgtacgtggtgggagacgatggc
aagatcaaggcggccgatgtgcggcagcagctgctgtcaggcgcctgggcgcagggtggc
gctgcgggcacggcgccgccgcccagcctgcgcaccatcaccgccagcccgccgctggag
ctgaccgccgcccactgcggcctcaaccgctccggcacgtacgccgcggtggcgggcagc
gccctggaggatcccgagatcagccgggtggtagtcatcgacctcgccaactgccgccca
gcgcccggctcgcccgcaagcggcggcgccgcccggcacgacctgtgcgacgcggtggtg
ctggacgcagagctctttgccagccggccgggcctgcgggtgctgcaggtcgggtggcac
cccgacagcgatgcccacctggcggtgctgacctcaggcgagccgggggcctgctgccgc
tgccgcccgccggtggcgcgtggtgatgacaacacgtggcgcctgtacaacacccagcac
gccgggctggcggagcagacgtttgagctccagctgcgcagcaggcggggccttggcctg
ggcggcgccggctctggcgccggcggcgccgggagagcagcggtcgcctttagctttggg
ccgccagagctgtggcagcgcttctccctctacttcctcacaggcgacggcagcctgtgg
tgcctgtgcccggtggtgccctttggctgccgctactccaccagcacaatagagcagctg
gagggggcggcggatgccggcggcagcggcgccggcggcgaggtcgacttcggcaccgcg
cccaacgcccaggcctggctgcagcgcgctttccagctgctggccacaccgcaggaccca
gcatttggctcgggaatgatgcaaagcgtgccgcacgcgctagacgagcacgtgcctgcg
ctggcgggcccactgccggtggcgtcggcggcaggcgaggagcagcgggagggcggcagc
ctgctgacgcgcatggcgggcagcggagacgcggcgcaggcgctgctgctttccaggttt
tcggagggctgcaccgctgttgctgtggccacggcccgaggcttcctggggctgcacctg
ctggcggggttcggcggcggtgcggcacctgcctggtgcgagtctgcgccgcagtgtgtg
tcagaagggcttgagatacaggcagtgcggtcgcaggttggagtggtgccaacagggagc
ggccagccggcgctgctactgctggacgttgtgaacttgagcctgccgccaccagatggc
gcctcggcggcggcggcggacgaggatgacgacggggaggttctggccatcggcggcggc
acctctgctgccagcgtcgcgctcttgccggatgctgtggccccagaggtgctgtacgct
gtgcactgcagcgccgctcatgccatcaccttgtcctggctgccgctgctggcggggctg
ctggaggaggtaggcggcgcgcggctgccggccgcgctgccgcagccggctgcagagctg
ctgatgcgcagcggagcaggtgtggcagccgcggcggcggtcggcgacaccctctccggc
tcggccctggtggtgctggaggcagacggcaagccgaggtgcctacggccgcaccgggcc
gacgccacggcagcagcaggcggcgcaggcggcggcggagcggcgtcggcggcggcggcg
tcggcgccagccggcggcagcgcggcccagcgggacgtcgaggctcagctggccacgatc
tatggagacctgcgcaaaggccccaagccctgcgagctgccgcaggcggcggcgggccgc
gccgccggggccggcaacctggaggggcagcgcctgctgaacgaggcggcggcggcgctg
cgtgcgtcccatgtggagtttgcgcaccaggctcaccaggatctcacggagcgcatgcgg
cagctgcaggcagagatcgacgggcagcggcggcggctggaggacgcggaggcggcggcg
gcggcagcggagcaggcggcggcggctctggacgccaaggccgcgcgcgttcagcagttc
caggggaacctgggggagcggctgcgtctcctggccgagctgcactgggcgctgccccgg
ccgccgtctcgcgcggagcggcggtttgctgacgagcagctgcccgcctttgaggcggct
gccacggcgctggaggaggatgcgagggcgctgcgcacgcgcgtgtcgctgctgcagcgc
aagctgcgctccgtggggcaggtggcggcgggggcggcggcgctgggcggcggcacggca
gcggcggtgctgccgccgcaccagctgcgccgcgtgcgagaggcgctggcggagcaggag
cagcagattggcgccaatcagcagcggctgagcgtgctcgaggaggccgccgcggtggca
gccgcggtgcacggctga
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