KEGG   Chlorella variabilis: CHLNCDRAFT_49703
Entry
CHLNCDRAFT_49703  CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
cvr  Chlorella variabilis
Pathway
cvr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CHLNCDRAFT_49703
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvr03041]
    CHLNCDRAFT_49703
   04121 Ubiquitin system [BR:cvr04121]
    CHLNCDRAFT_49703
Spliceosome [BR:cvr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    CHLNCDRAFT_49703
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    CHLNCDRAFT_49703
Ubiquitin system [BR:cvr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    CHLNCDRAFT_49703
SSDB
Motif
Pfam: SART-1 HIND DUF247
Other DBs
NCBI-GeneID: 17359551
NCBI-ProteinID: XP_005851951
JGI: ChlNC64A_1_49703
UniProt: E1Z3H0
LinkDB
Position
Unknown
AA seq 1732 aa
MSIEETNKMRIELGLKPLKMEAEELKGPSKEEVAKKEEAEKAAQAVELADRIKQSRERRQ
QQEALDRQKKLSAAGEDVDDVMAWVSKSRVTEAQRKAEAAAARRTQAAAAVRAAQADSED
DDEDEGMPSAAELAGAKVKHTAEELGEGETMILTLEDRGILDERGNLVEDDQDMVLENIL
AREDKERSKARKASGKQAKPLWEEDGKRRGLLDKYDEEEEQMMQLDDAGAVEAARQRRQE
EIRARLAAGAGGGGGGGGGAVVVEDASVVVQQAAADYYTQEEMAKFQKPKKKKERKLKKK
ALTEEELAALEAEAAARGGSDLGSRATRERRAADKAAAATAAAAERRARFDHALNKANYA
SLALRADAAAADEEEGGGLEEDEDLYQSLSKARQLAQKNAAAAGAAAAPKGPENLAAELI
KRREEQQRAAAAARGGGAPADGGLVFTDVAEFTRTIHVKEEEEGAPAAAPQQEQEAQERG
GGGAGAAGASGSGSGVKAEAEAEGDFGLDAMDTDLEPAGKASDNVWAGWVPASGAPGEIS
AAEMRQKLRAKQAAAAAAAGAAGAPEQQQQGEVKQDESVTRERAIGSGLAGALAFLKDRG
DLDAPGLDEVYTGGRQEDRLALDVEVALTRKDEYGRVLTPKEAFRQLCYRFHGIQPSKNS
REKRAKKAAEDVAKKKLASDVGATSGTASLGKMQAAQKQAATPYVVLSGTVKPGQSRDAI
SGYATVDRAEQLTAPTPVLSKLPGQSPLVGNAKVEAMLGIKRKGDSSMPPPPPKHARNTR
QFRGWYKATIDEVNLGTELGLEGEEGRRLWCLLRYAPEGDDPGDVEDQSWEYVWSTPTRC
RNHRVPPAAHAWLHAAVDAQQQLLQQQQAAGGAGAAGAAGADAGAGSISSPAGVAAPAAE
AAEAVATGVPPRPSRDTKRRRRATTTATARPPGSPAAAVGLLVAGQAPPARRQTLEQQQQ
KQAAAAPVPTPATDPAHASLDALAEAAASQRQEQGMGACRSVKAAAGTPSHSQGTTIAET
VRIRRGRRQAAPASADAHSAPGGASPTTPQALLPLDVRSLSREGGAARAAGAGPAPAPAY
LAAAAAAAAAAAAQEAAGPPPPPPGLLGVPPQQHLDLLTEAIQPLASADSPGALAAAFEA
LELLPGLAGLREEEVLAFKLLLLRDKEQRQLVWRELRRLLLRRSMAAAAAWLRGCVGQLG
IGGARGGAGSGDGASGSPPPVGPRTTLLSVVALAWGPGAVLESLKGEASLWQQEAQLYGR
KAAAALSEATGAEEGQAEAAAADATRLDPQLAAALLAAPLAALKQASSSSSSSASAAGGE
PGGCAGAAAAAPQLPRLEEEQYQWDYAVLLAQELPYFESAASCGHCGSEGGPEALADRAW
FDFLSYIQAAQFKALGRQLSAALSSTGAAAAALSGWQRMHAGSPEMQLRAAEQAWAAGGV
PPGRAPAGFGGGGTPDMQAAAAAAAFRARGQALDGSRSGGGGGGQAPRLTPADALRLSLG
AAILGHIEADLAAAARGGGGGGGGAAAALAAIRGTSPELDSIRDGARALLEYFTDKGLVA
AARCAQFGLSADEYEVLALQPAAPPLPPLRPPHVPLLRRAARAAAAGFHASAALAFFGAS
KNEERNHYTWSIGEPAFLKYWLQSPATLRSAAALDAEEGFSQDYVAATLQAYFRRCGVAA
ASLKRYPSYSEPQLVAEQWTLRRVAPLPPDHDWQQYREWQPDYCPLADEACY
NT seq 5199 nt   +upstreamnt  +downstreamnt
atgtcgatcgaggagaccaacaagatgcgcattgagttgggcctgaagccgctcaagatg
gaggctgaggagctcaagggccccagcaaggaggaggtggctaagaaggaggaggcggag
aaggctgcccaggcagtagagcttgcagaccgcatcaagcagtcccgcgagcggcggcag
cagcaggaggcgcttgaccggcagaagaagctgagtgcggccggcgaggatgtggatgac
gtgatggcttgggtcagcaagagccgggtcaccgaggcgcagcgcaaggcggaggcggcg
gcggcgcggcgcacgcaggcggccgcggcggtgcgcgccgcgcaggcggacagcgaggat
gatgacgaggacgagggcatgcccagcgccgctgagctggcgggggccaaggtcaagcac
acagcagaggagctgggggagggagagaccatgatcctcaccctggaggaccgcggtatc
ctggatgagcgggggaacctggtggaggatgatcaggacatggtactggagaatatactg
gcgcgtgaagacaaggagcgttccaaggctcgcaaggcctcgggcaagcaggccaagccg
ctgtgggaggaggacggcaagcggcgcggcctgctggacaagtatgatgaggaggaggag
cagatgatgcagctcgacgacgccggcgccgtggaagctgcgcggcagaggcggcaggag
gagatccgggcgcggctggcggccggggcgggcggcggcggcggcggcggcggcggggct
gtggtggtggaggatgccagcgtggtggtgcagcaggcggcggcagactattatacacag
gaggagatggcaaagttccagaagcccaagaagaagaaagaacggaagctgaagaagaaa
gcgctgacagaagaggagctggcggcgctcgaggcggaggcggcggcacgcggcggcagc
gacctgggcagcagagctacccgggagcggcgggcggccgacaaggcggcggcggccacg
gcggcggcggccgagcggcgagccaggtttgaccacgccctcaacaaggccaactacgcc
tcgctggcgctgcgcgccgacgcggccgcggcagatgaggaggagggcggcgggctggag
gaggacgaggatctctaccagtccctcagcaaggcgcggcagcttgcgcagaagaacgcg
gcggccgcgggcgcggcggcggcgcccaagggccccgaaaacttggccgcagagctgatc
aagcggcgggaggagcagcagcgcgcggcggcggcggcgcgcggcggcggcgcgcctgca
gacggagggctggtgtttaccgatgtggctgagttcacccgcaccatccatgtgaaggag
gaggaggagggcgcgccggcggcagccccgcagcaggagcaggaggcgcaggagcgcggc
ggcggcggcgcgggggctgccggcgccagcggcagcggcagcggggtcaaggcggaggcg
gaggcggaaggcgactttggacttgatgctatggacacagacctggagccagccggcaag
gcatccgacaacgtgtgggccggctgggtgcccgcctccggcgcccccggcgagatctcg
gccgccgagatgcggcagaagctgcgcgccaagcaggcggcggcggcggcggcggcgggc
gcggcgggcgcgcccgagcagcagcagcagggcgaggtgaagcaggatgagagcgtgacg
cgggagcgagccatcggttcaggcctggcgggcgcgctggccttcctgaaggaccgtggc
gacctggatgcccccggcctggatgaggtgtacaccggcgggcggcaggaggacaggctg
gcgctggatgtggaggtggcgctcactcgcaaggatgagtatgggcgggtgctgaccccc
aaggaggccttccgccagctgtgctacaggttccacggcatccagcccagcaagaacagc
cgggagaagcgggccaagaaggcggcagaggacgtagccaagaagaagctggccagcgat
gtgggggccaccagcggtaccgccagcctgggcaagatgcaggcggcacagaagcaggcg
gccacgccgtacgtcgtgctcagcggtaccgtcaagccggggcagtcgcgggacgccatc
tcaggctatgcgactgtggaccgcgccgagcagctgacggcgcccacgccggtgctcagc
aagctgcccggccagtcgccgctggtgggcaacgcaaaggtggaggcgatgctgggtatc
aagcgcaagggcgacagcagcatgccgccgccgccgccgaaacacgcgaggaacaccagg
cagttccgcggctggtacaaagcgactatcgatgaggtcaacttaggcacggagctgggc
ttagagggcgaggaggggcggcggctgtggtgcctcctgaggtatgctccagagggggat
gatcccggggatgtcgaggaccaaagctgggagtatgtgtggagcacccccacccgctgc
cgcaaccaccgagtgccgccggcagcccacgcctggctgcacgcagccgtggacgcccag
cagcagctgctgcagcagcagcaggcggctggcggtgcgggggcagcgggggcagcgggg
gcggatgcgggagcaggcagcatcagcagccctgccggggtggcagctcctgcggcggag
gcggcggaggcggtggcgacgggcgtgccgccgcgtccgtcccgcgacaccaagcgccgc
cgccgggccaccaccaccgccaccgctcgcccgcccggctcgccggcggcagcggtgggg
ctgctggtggcagggcaggcgccgccggcacggcggcagacgctggagcagcagcagcag
aagcaggcggcggcggcgccggtgcccacccccgccaccgaccctgcccacgccagcctg
gatgccctggccgaggcggctgcctcccagcggcaggagcaaggcatgggcgcgtgtcgc
agcgtcaaggcggcggcgggcactccctcccacagccagggcactaccatcgccgagact
gtcaggatccgtcggggcaggcggcaggcggccccggcctctgcagatgcacactcggcg
cctggaggggcctcccccaccacgccgcaggccctgctcccgctcgacgtgcgctcgctg
agccgggagggaggcgcggcgagggcggcaggcgccggccccgcacccgcgcccgcctac
ctcgccgccgccgccgcggccgcggccgccgccgcggcccaggaggccgccggcccgcca
ccgccgcccccgggcctgctgggggtgccgccgcagcagcacttggaccttctgacagaa
gccatccagcctctggccagcgccgactcgcccggcgccctggctgccgcctttgaggcg
ctggagctgctgccggggctggcggggctgagggaggaggaggtgctggccttcaagctc
ctgctgctgcgagacaaggagcagcggcagctggtgtggcgggagctgcgccgcctgctg
ctgcgccgcagcatggcggccgccgccgcctggctgcgcggctgcgtcggccagctgggg
atcggcggggcgcggggcggcgcggggagcggcgacggcgcaagcggcagcccgccgcct
gtggggccgcgcaccaccctgttgtctgtggtggccctggcctggggccctggggccgtc
ttggagtcgctcaagggagaggcctccctgtggcagcaggaggcacagctgtatggccgc
aaggccgccgccgccttgtctgaagccacgggagccgaggaggggcaggcagaggcggcg
gcggctgacgccacacggctggacccgcagctggcagcagcgctgctggccgcgccgctg
gcagctctcaagcaggccagcagtagcagcagcagcagcgcgagcgcagccggcggagag
ccaggtggctgcgccggcgcggcggcggctgcgccgcagcttccgcggctggaagaggag
cagtaccagtgggactatgcggtactgctggctcaggagctgccctacttcgagagcgcc
gcctcctgcggccactgcggcagcgagggcgggcccgaggcgctggctgaccgagcatgg
tttgactttctttcttacatccaggcagcgcagttcaaagcgctgggccgccagctcagc
gccgcgctttcctccacgggcgctgctgccgccgcgctgtcgggctggcagcgcatgcac
gccggctccccagagatgcagctgagggccgcggagcaggcctgggcagccggcggcgtg
ccgccgggccgcgccccggcaggctttggcggcggcggcacgcccgacatgcaggcggcg
gcagcggctgcggcctttcgcgcgcgcggccaggcactcgacggcagccgcagcggcggc
ggcggcggcggccaggctccccgcctcacccctgcagatgcgctgcgcctgtccctgggc
gccgccattctgggacacatagaggccgacctcgcggcagcggcacgcggcggcggtggc
ggcggcggcggcgcggcggccgccctggccgccatccgcggcaccagccccgagctggat
tccattagggatggggccagggcgctgctagagtacttcactgacaaaggtttggtggct
gccgctcgctgcgcccagtttggcttgtccgcagatgaatacgaggtgcttgcgctgcag
ccagcagccccgcccttgccgccgctcaggccgccgcatgtgccgctgctgcgccgcgcc
gcgcgcgctgccgctgcaggcttccatgcctcggctgccctcgctttcttcggagcctca
aagaacgaggagcgaaaccactacacgtggagcatcggggagcccgccttcctcaagtac
tggctgcagtcgcccgccaccctgcgctcggccgcggcgctggacgcagaggaaggcttc
agccaggattatgtggctgccaccctgcaggcctacttccgccgctgcggcgtggcggct
gcctccctcaagcgctacccctcctacagcgagccgcagctggtggcggagcagtggacg
ctgcggcgggtggcgccgctgccgccggaccacgactggcagcagtaccgagagtggcag
ccagactactgccccctggctgacgaggcctgctactag

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