Chlorella variabilis: CHLNCDRAFT_50422
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Entry
CHLNCDRAFT_50422 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvr04121
]
CHLNCDRAFT_50422
Enzymes [BR:
cvr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CHLNCDRAFT_50422
Ubiquitin system [BR:
cvr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
CHLNCDRAFT_50422
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
zf-C3HC4
RING_XB3-XBAT31
PHD
zf-C3HC4_3
PHD_5
TPR_10
YfcL
PHD_2
Motif
Other DBs
NCBI-GeneID:
17358367
NCBI-ProteinID:
XP_005850711
JGI:
ChlNC64A_1_50422
UniProt:
E1Z690
LinkDB
All DBs
Position
Unknown
AA seq
1718 aa
AA seq
DB search
MKRKRAPKRDVPRPEERNFLAPPEHDEGGGGDGGGGEGVDWAAGEAGLEDSDDSEGYAWR
PVKRGHRHRRRRRVLGGEEDGPLTVAVQAAPPAEQRWRFAELAVEWREAGSSSSQQRLEL
EDGQLRLCLPPDGGDVRVHYQASGGALWLGATAAPPAEGEALLLLLKSGHLSCSVPALPS
GASGSASGRLHLSLTDKAAADAAEHAEEQQQRQWHRQLLAVLRWLLPQLDPEQELELQSP
QKQAELLASPLCSPRAAAGAAAAGFGNPAAAAGTAAAGLASPRSPGAAAGGVPGAAAGFD
VSELYAAVKPTGREPELPACATAAYLLPTLRRYQARAAQWMVLREQGLVAAPGEAAAAAA
AAGGSQAADIKAEEGHQARDGAEPPLHPLWRRVPCSAGGGDGSSSDAGACFFVNAYNGRI
SLERFPATPEVRGGILSDEMGLGKTVELLACIAAHPYTGPPPTFQKPQQGGQRGSKRRAA
RVACLCGATSEEGYEGLWLQCDSCDTWLHAACCGLRRAPPGDFVCGGCQRAAAAARVAQD
CGATLVVCPTPILHQWRDEILRHIKPGALRLLIYEGQPQPGAGAASKVVTAAELAAADIV
LTSYDVLRRDVNHCPDEAEQAGAGRSLRWRKKYEASGAGGWAYVGLRAAGCEVMPTPLTR
LRWWRVCLDEAQMVESSTAKAAEMALKLHTVHRWCVTGTPVSRSLEDIYGLLAFLQASPY
SNRHWWQRAVQQPYEAGSRAGRARLLSLLRPALGGLLWRSSKADVAHELGLPPQHHHLKS
LQMSAIERHFYSRQHQECVAKARAALSSQLLAAATAAAAAHDGVAISDSREAGAGAAAAA
EAGAAPASPPAVRLPPAATAAAGFEDRALTRREEASLLHPLLRLRQACCHPQVGGAGIRA
VGPAGHNRSPMTMGEVLEVMLAKARVEAEDAQRLLLASLNGLAGLLLLQEQPVEAVRAYR
EALATIEQNKSLIRADKLQQLHTLTNLAAVLGPEGRSVEGAAPTLRDAWLETEAQEIREE
YLAESLSRLTDAAQEVEEVQRHVQRCKAPLLQHVSAAEAEELLAGWYMRGVALIVAHGRD
HHTQRAVAERIKEQVKEETMYLRSVSQNAASIASRFRDLHGLELAVKQEVRELGRAQAEA
TQELQRLQAACRAPPPALVELAATCSRCRAETAVAGRVCRHCRLEELFWSWEGWEGWEGG
AWACLLSVHNARGPAHQLQTTICAGLSPPAAQAGRAFALYSKAREGGGRVTADDAIRQAQ
QATLFNRVGRGGLGEAAAEQLGGSIGDAGGEDEEGGHHLLLGAGRRDDAVAKTEIVRRPG
DAENVLRLLLHQLRLVKKDLVMTAGKAHLELMEQYRRLYLKARALSLAQRQRLYAVDELE
QCTMRIKLLSDNELRLKEGEEIYRVYEHEVPVRSTELSNDKASAELELHRKLGTLRYLTG
IKAREAARAAAAAAAEAQVAAAAEEDAAAGPMGDGVEEAGTGAAGKHSVAPAAGAGRGEP
GVDAGLPCQPAASEAGTTAAARGLVAAAAGEEDREDICPICHDRLGQEMVMLACAHRLCC
RCSVALQERLPAGQPKASRRIECPVCRTRVPVSDLVYIDARLASPGGKVRRRSGRGCCRA
CGCCRGSMGHRQGMRLARACNWLMGGRLLTACATCELQRARGEEAEGEGDIEVKGSYGTK
CGVFEHRTSLQQGKADWGISMATFCWKGMQRESRGEVS
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcaagcgcgcacccaaaagggacgtgcccagacccgaggaacgcaatttcctc
gcgccgccagagcacgacgagggcggcggcggcgacggcggcggcggcgagggggtcgac
tgggcggctggggaggcgggcttggaagacagcgatgacagcgagggctacgcgtggcgt
cccgtcaagcgcgggcaccgccaccggcggcgacgacgggtgctcggcggcgaggaggat
gggcccctgaccgtcgccgtccaggcggcgccgccggcggagcagcggtggcgtttcgcc
gagctggcggttgagtggcgggaggctggctcctcctccagccagcagcggctggagctc
gaggacggccagctgcggctctgcctgccaccagacggcggcgatgtcagggtgcactac
caagccagcggcggcgccctgtggctgggcgccaccgctgcccctcccgcagagggggag
gccctgctgctgctcctcaagtctggccacctcagctgcagcgtgccagccctgccaagc
ggcgccagcggcagcgccagcggcaggctccacctcagcctcacagacaaggcagcggcc
gatgcggcagagcacgccgaggagcagcagcagcggcagtggcaccgccagctgctggcg
gtgctgcgctggctgctgccgcagctggatccagagcaggagctggagctgcagtcccct
cagaagcaagccgagctgctggccagccctctgtgcagcccacgggccgccgccggcgct
gccgctgcgggctttggcaaccccgccgcagctgcaggaacagcagccgcagggctggct
tcgcctcgcagccccggcgccgccgctggcggggtgcctggggcggctgcgggctttgat
gtgtcagagctgtatgcagcggtgaagcccacggggcgggagcccgagctgccggcgtgc
gctacggctgcctacctgctgcccacgctacgccgctaccaggcgcgggcagcccagtgg
atggtgctgcgcgagcagggcttggtggctgctccaggagaagcagcagcagcggcagcg
gcagcagggggctcacaggcagccgatatcaaggcggaggaggggcatcaggcgcgggat
ggggccgagccaccgctgcacccgctgtggcggcgagtgccgtgctcggctggcggcggc
gacggcagcagcagcgacgccggcgcctgcttctttgtgaacgcatacaacggaaggata
agcctggagcggttcccggcgacgccagaggtgcggggagggatcctatcggacgagatg
ggattaggcaagaccgtcgagctgctggcatgtatcgcggcccacccctacaccggccca
cctcccaccttccaaaagccgcagcagggcgggcagcgcggcagcaagaggagggcggcg
cgtgtggcgtgcctgtgcggcgccacctcagaggaaggctacgaaggcttgtggctccag
tgcgactcatgcgacacctggctgcacgccgcctgctgcggcctgcgccgtgcgcccccc
ggcgactttgtgtgcggcggctgccagcgcgcggcggcggcggcgcgagtggctcaggac
tgtggcgccacgctggtggtctgccccacccccatcctgcaccagtggcgggacgagatt
ctgaggcacatcaagcccggcgccctgaggcttctgatttacgagggccagccgcagcca
ggggcgggcgccgcctccaaggtggtcactgctgctgagctggcggcggccgacattgtg
ctcacgtcgtatgatgtactgcggcgggacgtcaaccactgccccgacgaggcagagcag
gcgggcgcggggcgcagcctgcggtggcgcaagaaatatgaggcgagtggggcgggcggt
tgggcatatgtgggtttgcgagcagctggttgtgaggtcatgcccacgccgctcacccgc
ctgcgctggtggcgagtgtgcctggatgaggcgcagatggtggagagcagcacagctaag
gccgctgagatggccctcaagctgcacacggtgcaccgctggtgtgtgacaggcacccct
gtgtctcggagcctggaggatatctatgggctgctcgccttcctccaggcctcgccctac
agcaaccgccactggtggcagcgcgccgtgcagcagccgtacgaggcgggcagccgcgcg
ggccgcgcccggctgctgtcgctgctgcgccccgcgctgggcggcctgctgtggcgctcc
tccaaggctgacgtggcgcacgagctggggctgccgccacagcatcaccacctcaagagc
ctgcagatgtcggccatcgagcgccacttctactcgcgccagcaccaggagtgcgtggcc
aaggcgcgggcggcgctctcctcgcagctgctggccgcagccacagcggccgcagcggcg
cacgacggcgtcgcaatttcggacagccgcgaggcgggggctggtgctgctgcggcagca
gaagcgggcgccgcgccagcgtccccgcccgcggtgcgcttgccgccggcggccacggcg
gccgccgggtttgaggaccgtgcgctgacgcggcgggaggaggcgtcgctgctgcacccg
ctgctgcgcctgcgccaggcgtgctgccacccgcaggttggcggcgcgggcatccgagcg
gtggggccggcggggcacaacaggtctcccatgacgatgggcgaggtgctggaggtgatg
ctggcaaaggcgagggtggaggcggaggatgctcagcgcctgctgctggccagcctgaac
ggcctggcgggcctgctgctgctgcaagagcagccggtggaggcggtgagggcgtaccga
gaggcgctggccacaattgagcagaacaagtcgctgatccgtgccgacaagctgcagcag
ctgcacaccctcaccaacctggccgctgtgctgggccccgagggcaggagtgtggagggg
gctgctcccacactgcgggacgcctggctggagacggaggcgcaggagatccgggaggag
tacctggcagagtcgttgtcccgcctgacggatgcggcgcaggaggtggaggaggtgcag
cgtcacgtgcagcgctgcaaggccccgctgctgcagcatgtgtcggcggcggaggcggaa
gagctgttagcaggctggtacatgcggggggtggcgctgattgtggcgcatggccgggac
caccacacccagcgcgctgtggctgaacgcattaaggagcaggtgaaggaggagacaatg
tacctcagatcggtatcccagaatgccgcctccatcgcctcccgcttccgcgacctgcac
ggcctggagctggctgtgaagcaggaggtgcgggagctgggcagggcgcaggcggaggcc
acgcaggagctgcagcgcctgcaggccgcatgccgggcgccgccgccggcgcttgtggag
ctggcggcgacgtgcagccggtgccgcgcggagacggcggtggcggggcgtgtgtgccgc
cactgcaggctggaggagctgttctggagctgggagggctgggagggctgggagggtggg
gcctgggcctgcctgctgtccgtccacaacgcccggggccccgcgcaccagctgcaaact
acaatctgcgcgggcctgtcgccaccagcagcccaggcagggcgtgcgtttgctctgtat
tcaaaggcccgggagggtgggggccgggtgacggcggatgatgccatccgccaagcgcag
caggcgaccctgttcaaccgcgtgggtcgcggcgggctgggggaggcggctgcggagcag
ctgggcggcagcattggcgatgccggcggcgaagacgaggagggagggcaccacctgctg
ctgggggcggggcgcagggacgatgcggttgccaagacagagattgtgcggcgccccggg
gatgccgagaatgtgctgcgccttctgctgcaccagctgaggctggtcaagaaagatctg
gttatgaccgcgggcaaggcgcacttggagctgatggagcagtaccgccgcctgtacctc
aaagcccgcgcactctcccttgcccagcgccagcgcctgtatgcagttgatgagctggag
caatgcacgatgcgcataaagctgctgagcgacaatgagctgcggctgaaggagggggag
gagatctatcgagtgtatgaacacgaggtgccggtccgcagcacggagctgtccaatgac
aaggcctctgctgagctggagctgcatcgcaagctgggcacgcttcgctacctgacaggc
atcaaggctcgggaggcagccagggccgctgccgctgctgctgccgaggctcaggtagct
gcggcggcagaggaggatgcggcagcagggccgatgggggatggtgtggaggaggcaggc
acaggggcggcaggcaaacactctgtggcgcctgcagctggggctggcaggggagagcca
ggcgtggacgcaggtttgccctgccagccagcagcttcagaggcgggcacgacagcggcg
gcgcgcggcttggtggcggcggcagctggcgaggaggatcgcgaggatatctgccccatc
tgccacgaccgcctggggcaggagatggtcatgctggcatgtgcacaccgcctgtgctgc
cggtgcagcgtggcgcttcaggagcggctgccggcgggccagcccaaggccagccgccgc
atcgagtgccccgtgtgccgcacccgtgtgccggtcagcgatcttgtgtacatcgatgca
cggctggcatcccctgggggcaaggtgcggcgcaggagcggaaggggctgctgcagggcc
tgtggctgctgcaggggcagtatggggcaccggcagggcatgcgactggctagagcatgc
aactggctgatggggggccgcctgctcaccgcctgtgctacttgcgagctacagcgggcg
agaggtgaggaggcggagggcgagggcgacatagaagtgaagggatcgtatggaacgaag
tgtggggtgtttgagcaccgaacaagtttgcagcagggcaaggcagattggggcatttca
atggccaccttctgctggaagggcatgcaacgggaaagtagaggggaggtctcatga
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integrated database retrieval system
