Chlorella variabilis: CHLNCDRAFT_51639
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Entry
CHLNCDRAFT_51639 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K19681
intraflagellar transport protein 52
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cvr03037
]
CHLNCDRAFT_51639
Cilium and associated proteins [BR:
cvr03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
CHLNCDRAFT_51639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
DUF4350
ABC_transp_aux
OST48_N
DUF4159
ThuA
Motif
Other DBs
NCBI-GeneID:
17356240
NCBI-ProteinID:
XP_005848952
JGI:
ChlNC64A_1_51639
UniProt:
E1ZBG5
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MEPVVLISACKGEARNLRSGYKQLARHLKAARCDVRRLDAASGLTPAALAQAAIVVFGGP
TQPFAPNELDCLRAYLRGGGNLLVLAGEGGEAAAGTNLNSLLADYGLRVAADCVIQTAFT
RRAAAAAPAGRQPAKTAASYTAADGRYLHPKQVLVSEGMLSPDMVAYCANNSRAAARRAA
GAGGGGAAAAGGRATDENGRPLASFVYPNGSTVVAQAPALPFLSSGQVAHPCNMTIGAAW
WQEGGGGSGRLAVLGSAAMFDDEWLAKEDNTALLDFLLGWMLRDPACELRPKNMAEPEIV
DPRPVTHVAELAAKPLVCLQEHDDLPRDITKLFADKLFKLDLSLIPQVAALRRAMGAEGV
LQRRALPLWRPPLEVPFPPLQPAVFPPAFAEPPPPSLELFDLEEELAGPLEQLSRATAQF
LAAPKASQQLEAYVQGCAQLLGLRSARGGGAKEQLAEVLEAVVQCKLPDFYAQPAAGSGE
DPY
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgtcgtgcttatctccgcctgcaagggggaggcccgcaacctgcgctccggc
tacaagcagctggcgcgccacctgaaggcggctcgctgcgatgtgcggcgcctggacgcc
gcctctgggctcacgccggcggcgctggcgcaggcggcgatcgtcgtgtttggcggcccc
acccagccctttgcgcccaatgagctggactgcctgcgcgcctacctgcggggcggcggc
aacctgctggtgctggcgggggagggcggcgaggcggcggcaggcaccaacctcaactcc
ctgctagccgactacggcctgcgtgtggccgccgactgtgtcattcagacggccttcacc
aggcgcgctgctgccgctgcgcctgctgggcggcagcctgcaaaaacagcagcatcgtat
actgcagcagacgggaggtacctgcaccccaagcaggtgctggtctcggagggcatgctg
tcccccgacatggtcgcctactgtgccaacaacagccgcgcagcagcccggcgcgccgcc
ggggcaggcggcggcggcgcggcggcggcgggcggccgcgccaccgacgagaacgggcgc
ccgctggcctcctttgtctaccccaacggctccacggtggtggcgcaggcccccgccctg
cccttcctgtcctcgggccaggtggcgcacccctgcaacatgacaataggcgcggcctgg
tggcaggagggcggcggcgggtcggggcgcctggctgtgctgggctcggccgccatgttc
gacgacgagtggctggccaaggaggacaacaccgcgctgctggactttctgttgggctgg
atgctgcgggaccccgcctgcgagctgcgccccaaaaacatggcggagccggagatcgtc
gacccccgccccgtcacgcatgtggccgagctggcggcgaagccgctcgtgtgcctgcag
gagcacgatgacctgcctcgcgacatcaccaagctgtttgccgacaagctcttcaagctg
gacctgtccctcatcccgcaggtggcggcgctgcggcgcgccatgggcgccgagggcgtg
ctgcagcggcgcgcgctgccgctgtggaggccgcccctggaggtgcccttcccgccgctg
cagcccgccgtcttcccgcccgcctttgccgagccgccgcccccttcactggagctgttc
gacctggaggaggagctggcggggccgctggagcagctgagccgcgcgactgcgcagttc
cttgcggcccccaaggccagccagcagctggaggcgtacgtccagggctgcgctcagctg
ctgggcctgcgcagcgcgcgcggcggtggcgccaaggagcagctggccgaggtgctggag
gcggtggtgcagtgcaagctgccagacttctatgcccagccggcggcagggtccggcgag
gacccgtactga
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integrated database retrieval system