Chlorella variabilis: CHLNCDRAFT_52248
Help
Entry
CHLNCDRAFT_52248 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvr03041
]
CHLNCDRAFT_52248
Spliceosome [BR:
cvr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
CHLNCDRAFT_52248
Complex C
U4/U6.U5 tri-SnRNP related factors
CHLNCDRAFT_52248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MA3
MIF4G
Motif
Other DBs
NCBI-GeneID:
17354987
NCBI-ProteinID:
XP_005847551
JGI:
ChlNC64A_1_52248
UniProt:
E1ZF72
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MGKRSPSRDSSPSAKRRKDDSRSDDDKSRSRGHSRSRSRSRSTSSSRSRGSRSSRSTSTS
RSRSRDRRSRSRSRSQDRRRSRGDDRRRSRSRSRSRRRDEGPRGGGRWGDRRPSPPRRGR
SPPPRRVDRGDGDERPVRNGPGPDRRQIGDRNGVAAEAAPPAEAAAPAAAPEPRERKPVA
AGPAGGVYIPPFKLAQMMAEAADRESAQYQRMTWDALRKSINGLVNKVNAANIKHILPEV
FGENLVRGRGLFCRSIMKSQMASPSFTPGGLFLSRWVLGAWDGHRALQGGRSGPPDASRQ
VCRSACMHIWRALGFSHPQHAQLLGTAAQLPWQLWLAASRPPGKRAGGPRRGVAAAGHRP
TWHMHQLIATCDSVLRRRAATSPITSSSGCSPGSTCLQFKRAYKRNDKPVCVAAIKFIAQ
LANQQVVHELLPLELLLLLLETPSDDGVEVAVDFLKEVGPLLQDLSPSGLQTIMDRLRSI
MQEGNVDTRTQYIGIPAGLEMELTTMIIECCSNEKTFIKYYALLGERFCKYKREYADCFS
EAFVQQYQLIHRLETNKLRNTAKLFAHLLTTDAIPWAVMQVIRLTEEDTTSSSRIFIKIL
FQARRLSLPAPELAETMGLMQLNKRLNDPTCQDWFMGVFPRDSPRNMRFAINFFTSIGLG
GLTDSMREVLKNLPKMLAAQQAAAAAAAGSGSDSDSDSSSSSSSSDSDSDSSSSSSSSGS
GSSSSSSSSSGSSSSDDSSGSSSSEGEEEPARGKGKSKGGGRSPPPPVAERGGRSSPPPA
ERRRGAGAAGGREEPPLNGRPGSDRELAERRRDERVQRRDSRERVQRRSASREDRRERGA
GRSGEDRRRRDRSDSRGRGRR
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcgctcaccctccagggactccagtcccagcgctaagcggcgcaaggacgac
agccgcagtgacgacgacaagagccgcagccgggggcacagcagaagccgcagcaggagc
aggagcaccagcagcagccgcagcaggggatctcgcagcagccgaagcaccagcaccagc
cgtagccgcagccgcgaccgccgctctcgctcgcgtagccgcagccaggaccggcggcgc
agcaggggcgacgaccgccgccgcagccgcagccgcagccgcagccggaggagggatgag
ggccctcgcggtggcgggcgctggggcgaccgccggccctcgccgccccgccgcggccgc
tcgccgccaccccgccgcgtggaccgcggcgacggcgatgaaaggcccgtgcgcaacgga
ccggggccagaccgcaggcagataggcgaccgcaacggcgtggcggcggaggcggcaccg
ccagcggaggccgcggcgccggccgcagcacccgagccgcgggagcgaaagccggtggcg
gcggggcccgcgggcggcgtctacatcccgcctttcaagctggcccaaatgatggcagag
gcggctgacagggagtctgcccagtaccaacgcatgacctgggacgcgctgcgcaagtcc
atcaacggcctagtcaacaaagtcaacgccgccaacatcaagcacatcctgccagaggtg
tttggggagaacctggtgcgagggcggggcctgttctgccggtccatcatgaagagccaa
atggcctccccctccttcacccccggcggcctcttcctgtcgcgctgggtccttggcgcc
tgggatgggcaccgtgccctgcagggcgggcgcagcgggccgccagacgcaagcaggcag
gtctgcaggtcggcatgcatgcacatctggcgggccctgggcttcagccacccgcaacac
gcacagctgctgggcaccgcggcccagctcccgtggcagctgtggctggccgccagcagg
ccgccagggaagcgtgccggcgggccgcgccgaggggtggcggcggcaggccacaggcct
acctggcacatgcaccagttgattgccacctgcgacagcgtcttgcgccgccgcgccgcc
acctcccccatcacctccagcagcggctgcagccccggcagcacctgcctgcagttcaag
cgcgcctacaagcgcaatgacaagcccgtgtgcgtggccgccatcaagttcattgcccag
ctggccaaccagcaggtggtgcacgagctgctgccgctggagctgctgctgctgctgctg
gagacgccctcggacgacggcgtggaggtggccgtggatttcctcaaggaggtggggccc
ctactgcaagatctgtcgccctcgggcctgcagacgatcatggaccgtttgaggtccatc
atgcaggagggcaatgtggacacccgcacccagtacatcggaatccccgccgggctggag
atggagctgaccaccatgatcatagagtgctgctccaatgagaagaccttcatcaagtac
tacgcgctgctgggcgagcgcttctgcaagtacaagcgcgagtacgccgactgcttctcg
gaggcctttgtgcagcagtaccagcttatccacaggctagagaccaacaagctgcgcaac
actgccaagctgtttgcccacctgctgaccacagacgccataccctgggccgtcatgcag
gtcatccgcctcaccgaggaggacaccacctcctcctcccgcatcttcatcaagatcctg
ttccaggcgcggcgcctgagcctgcctgcgcctgagctggctgaaacgatggggctgatg
cagctgaacaagcgcctcaacgaccccacctgccaggactggttcatgggcgtgttcccg
cgggactcccctcgcaacatgcgcttcgccatcaacttcttcacttccatcggcctggga
ggcctcaccgacagcatgcgggaggtgctcaagaacctgcccaagatgctggcagcgcag
caggcggccgccgccgccgccgccggcagcggcagcgacagcgacagcgattcctcctca
tcatcatcatcctcggattccgattccgattccagcagcagcagcagcagcagcggctcg
ggctcttcctcgtcctcatcatccagcagcggcagcagcagcagcgacgacagcagcggc
agcagcagcagcgagggcgaggaggagccggcgcgcggcaagggcaagagcaagggcggc
ggccgctcgccgccgccgccggtggccgagcgcggcgggcgcagctcgccgccgccggcc
gagcgtcggcgcggcgccggtgccgccggtggcagggaggagccgcctctcaacggccgc
cccggctccgaccgcgagcttgccgagcggcggcgcgacgagcgggtgcagcggcgggac
agccgggagcgcgtgcagcggcgcagcgccagccgcgaggacaggcgggagcgcggcgcc
ggcaggagcggcgaggacaggcgccggcgcgaccgcagcgattcgcgcggcagggggcgg
cggtga
DBGET
integrated database retrieval system
