Chlorella variabilis: CHLNCDRAFT_54198
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Entry
CHLNCDRAFT_54198 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cvr
Chlorella variabilis
Pathway
cvr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
CHLNCDRAFT_54198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvr04131
]
CHLNCDRAFT_54198
Membrane trafficking [BR:
cvr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
CHLNCDRAFT_54198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Rhodanese
Motif
Other DBs
NCBI-GeneID:
17352331
NCBI-ProteinID:
XP_005844872
JGI:
ChlNC64A_1_54198
UniProt:
E1ZMY1
LinkDB
All DBs
Position
Unknown
AA seq
826 aa
AA seq
DB search
MVEPTYLPEEQKAWLKDASNAVKRHGFYLRKAIDDDNMKEALRYSAALLGELRTSLLSLS
AAWFDGLPQIFFRDESGKGRSQADLYDLVQHAGNIVPRLYLLCTAGACYIRGGEAPAKLI
LRDVVEMCKGVQHPTRGLFLRAYLVQARAPWQAGGGVSCVGCCRIPGRSMKEKAKGGNVI
DAIEFLLVNFTEMNKLWVRMQHQGSARDRERRERERQQLADLVGKNLTYLSQLDGLTFPL
YKDIVLPRVLEQVVSCRDDIAQQYLMQCIIMVFPDEFHLGSLQSLLGAMPQLQPGVRVHI
VLSLLMDRLANYASGDKEVVEEMNMVDAFGQLSVVALKVVEQHPDMPGADVAAMYSALLG
FSGTVYPDKLDFVDRVLQTCHNALQRRGPITDGKAEKQVVALLSTPLDKYDAVTVLGLAH
YPSVMELLQPRMKREMATKIVQTLLKSGTKVSTVGQDIAEDQQLLARLVHNMQALEGDAD
GQYDMLVATQAFILYEESIPDSRQEVRALQSIMGTLNRQVVAAWHSMVCYVFGGDERAAL
AHKASSYCAKLLKRTDQCQAVLACSHLYWQPQVEGKQAVQDEQGVLSCLKRALKIANAAQ
QQLAVAGKPARGADASAGPAAASSLFVEILNHYLYFFDQGCQLITTASLLELVANEMAAD
ACKDNEALQVFYINTLAHIKQQKAKGGEASAKYDGLQLAAGEYEESHITKPPRKSLNMPF
AVGQEDGAAFVAQMCGDGVQGSAEAAALLEAAGYSGVAQMEGGYVGYTQVWSPSGKRRPP
AGRWVSTGKEALKSGLDLRDVAMAYEEGGNMKVARYAEGLPPGESL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggttgagcccacctacctgcccgaggagcagaaggcatggctcaaggacgccagcaac
gcagtcaagcgccacggcttctacctgcgcaaggccattgacgatgacaacatgaaggag
gcgctgcgctactcggctgccttgctgggggagcttcgcaccagcctgctgagcctgtct
gccgcctggttcgatggtctaccgcagatctttttccgtgatgagagcggcaaggggcgc
agccaggccgacctgtatgacctggtgcagcacgccggcaacatcgtgccacgcctatac
ctgttgtgcacggcgggggcatgctacatccgtggcggcgaggcccctgccaaactcatc
ctgcgggacgtggtggagatgtgcaagggcgtgcagcaccccacccgtggcctcttcctg
cgtgcctacctagtgcaggcaagggcaccttggcaagcggggggtggggtgtcatgcgtg
ggctgctgccggataccgggtcgcagtatgaaggagaaggcaaaggggggcaatgtgatt
gatgccatcgagttcttgctggtgaattttacagagatgaacaagctctgggttcgcatg
cagcaccagggctctgctcgagatcgagagcggcgcgagcgggagcgccagcagctggca
gaccttgtgggcaagaatctcacctatctgtcccaattggatgggcttaccttcccgctg
tataaggacattgtgctgcccagggtgctggagcaggtggtaagctgccgggacgacatt
gcgcagcagtacctgatgcagtgcatcatcatggtgttcccagacgagttccatctggga
tcacttcagtcgctgctgggcgcaatgcctcagctgcagccgggggtgcgggtgcacatc
gtgctgtcgctgctcatggacagactagccaattatgcttctggggacaaggaagttgtg
gaggagatgaacatggtggatgcgtttgggcagctgagcgtggtggcactcaaggttgtg
gagcagcaccctgacatgcccggcgccgatgtggcggccatgtacagcgccctgttgggc
ttcagcggcacagtgtaccccgacaagctggactttgtggaccgagtgctgcagacctgc
cacaacgccctccagcgccgcggacccatcactgatggcaaggccgagaagcaagtggtg
gcgctgctatccacgccactggacaagtacgatgccgtcacggtgctgggactggcgcac
taccccagcgtcatggagctgctgcaaccgcgcatgaagcgagagatggcgaccaagatt
gtgcagacgctgctgaaaagcggcaccaaggtgtccaccgttgggcaggacatagcggag
gaccagcagctgctggcgcggctggtgcacaacatgcaggcactagaaggcgacgcggat
gggcagtatgatatgctggtggcgacacaggccttcattctgtacgaggagagcatcccg
gacagccggcaggaggtgcgggcgttgcagagcatcatgggcaccctcaacaggcaagtg
gttgcagcatggcacagtatggtgtgttatgtttttggcggcgacgagcgcgccgccctg
gcgcacaaggcctcctcttactgtgctaagctgctgaagcgtactgaccagtgccaagcg
gtgctggcctgcagccacctgtactggcaaccgcaagttgagggcaagcaggccgtgcag
gatgagcagggggtgctttcgtgcttgaagcgcgcgctgaagattgccaatgcggcacag
cagcagctggcggtggcagggaagccggcacggggcgctgatgcatcggctggccctgcc
gccgcctcctccctgtttgtggagatcctcaaccactacctctacttcttcgaccagggt
tgccagctcatcaccaccgcaagcctgctggaactggtggccaatgagatggcggcagat
gcctgcaaggacaacgaggcgctccaggtattctacatcaacacgctggcgcacatcaag
cagcagaaagccaaggggggcgaggcatcggccaagtacgacggcctgcagctggcggcg
ggagagtacgaggaaagccacatcaccaagccaccgcgcaaatccttgaacatgcccttt
gccgtggggcaggaggatggtgccgcctttgtggcgcagatgtgcggcgacggcgtgcag
ggctctgcagaggcggcagcattgctagaggcggcgggctactctggcgtggcacagatg
gagggcggctatgttggctacacacaggtgtggtcgcccagcggcaagcggcggccgcca
gctgggcgctgggtcagcacgggcaaggaagccctcaaaagcggcctggatttgagggac
gtcgcgatggcgtacgaagagggtggcaatatgaaggttgcgcgctacgcagagggcctg
ccgccgggggagtcgctctga
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