Chlorella variabilis: CHLNCDRAFT_54543
Help
Entry
CHLNCDRAFT_54543 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K12850
pre-mRNA-splicing factor 38B
Organism
cvr
Chlorella variabilis
Pathway
cvr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHLNCDRAFT_54543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvr03041
]
CHLNCDRAFT_54543
Spliceosome [BR:
cvr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
CHLNCDRAFT_54543
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
17351785
NCBI-ProteinID:
XP_005844327
JGI:
ChlNC64A_1_54543
UniProt:
E1ZPB8
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MEQYGNQTTFNLESVLLQNIKRSQYWEKRAKDIADWSELVDEIFETVDNVEPWMSGNARG
PSTAFNLLYRLCQLKPDVRQVRQMLDHVDSTFIRAIGLLYLRYVCDPRQLWDWFRNYVRD
EEICKAGLLSLLFTQEFEPSPPGLGRTVTIGAFARDILLDQFYFETIFPRVPKPGGADRR
GVNDGTARPASVKASLSVAFGQRAPNRAGAREQGRGMGADLQVGSGAHRSPSPYKREERP
ASRNECQRDRWRDEKERNGRKEERRERDYRRERSRSRDRTYRQDGQEREYQRRSRSRDYE
RRRDDRKYEKRRSRSRDRAAPVHTNPDKIREVYG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtatggcaaccagacgaccttcaacttagaatccgtgctgctgcaaaacatc
aagcgctcgcaatactgggagaagcgggcaaaggacatagctgactggtcggagctggtg
gacgagatctttgagaccgtggacaatgtagagccctggatgagcggaaatgcgcgcggg
ccctccaccgccttcaacctgctctaccgcctgtgtcagctgaagccggatgtgcggcag
gtgcggcagatgctagaccatgtcgactcgaccttcatccgcgcgattggcctgctctac
ttgcgctacgtgtgcgacccgcgccagctgtgggactggttcaggaattacgtgcgcgac
gaggagatctgcaaagcgggcctcctttccttgctcttcacacaggagtttgagccatcg
cctccggggctgggccgcacagtgaccatcggcgcgtttgcacgcgacatcctgctcgat
cagttctactttgagaccatctttccgcgtgtgcccaagcctggtggtgccgaccgacgt
ggcgtgaatgacggcactgcccgccctgcatctgtcaaggcatcgctttcagttgcgttt
gggcagcgtgcaccgaatcgcgccggcgcacgggagcagggccgaggcatgggagccgac
ctgcaagtgggcagcggcgctcatcgttcgccctccccatacaagcgcgaagaacgaccg
gcatcccgcaacgagtgccagcgagacagatggcgggatgagaaggagcgcaacgggagg
aaggaggagcgccgggagcgggactaccggcgggagcgcagccggagtcgggatagaacc
tacaggcaggatggacaggagagggagtaccagcgccgcagcaggagccgggactatgag
cggcgtcgggacgacaggaagtacgagaagcggcgcagcaggagcagggaccgcgccgcg
ccggtgcacacaaaccccgacaagatcagggaggtctacggttga
DBGET
integrated database retrieval system