KEGG   Chlorella variabilis: CHLNCDRAFT_54673
Entry
CHLNCDRAFT_54673  CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
cvr  Chlorella variabilis
Pathway
cvr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CHLNCDRAFT_54673
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvr03019]
    CHLNCDRAFT_54673
Messenger RNA biogenesis [BR:cvr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CHLNCDRAFT_54673
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     CHLNCDRAFT_54673
SSDB
Motif
Pfam: EDC4_C WD40 Ge1_WD40 WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_EML TSNAXIP1_N ANAPC4_WD40 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 17351523
NCBI-ProteinID: XP_005844180
JGI: ChlNC64A_1_54673
UniProt: E1ZQ19
LinkDB
Position
Unknown
AA seq 1040 aa
MAVPGAGLLALLRKRTASKFEARSSAVHALEHAVAAGTVAEAARPQAQGRRIPPGPRYTY
DVDTHVPHEAQPQLPVTPVTLINTDYALHHWRQIAVGPSYICYGLKQGHIRVLSRHSAVR
ALLKGHTKPLTDLQFAAASPDAGHDSGSSSASSAFNEVLLASGGHDGQLFVWHLQLDEDN
ATIRETQQLHASFASAAGVSGDVLLSWHAPSRRVLAVGVGGKVLLVSVPADGGMEQLEFD
LDDNSTPDATVLPDWSGEAVTCLAFSPDGQLLAAGGAAGSVLVWQLQSLSAAGPGGSSSL
VATHSVAILAAADNGTAAGAAVGAVCWLPMPQGWALVTGNRNNAALQLWHSVSLEGSWKL
LQTLQFEGKSGQQEFYSHVDVVPAQQLVVLADTARKAIYTLHYSGSGADLQFDYVARFGV
AVPILSFTALWNPAGGEQGDSPLVELNCVQTTAVQQYSLDPALCYAAPDVSPEPQEHGVV
RRSSLLERHGQDLSIKPQPSTAVPMPSEALASGTPRNSCVAAAGIAPPAAVAAAERAAEP
VAADASEARAADAAPAPLLEPSIEGVVPLLASIPPLPPADAPESPQPRASGLLLAASCPP
AHAFACSSSATTSRNSASGSTDAGQWGGPAQPQPQHVLQRRIVNAAALPPPSAAREATGD
EGQVALPPSPAPPATAVASTQDAAVAAAVLEQMGGVHKKFVGHVSLMYRELLKAMKAELG
VQTAQQQQATAQLLAAAMEAQKQQIEAERAAVLAEERANIERLLTAISATLNQDLPSKLA
EAVRGEVDGMVDGLAAALVPAVQTALATSLPKDLAGAVKSAGLDKALAPAVAAGLGKPLQ
EAFRTAFTKQLVPAFEGATQSMFQQINTTFTAGFEQHLQASNSALAASLQAQQQLLRAHP
ATTVDVRGELSSLLRAGEYEQAFSRALGLQDVSTVGWLASQTDAASVLGCDPCPLSQGIL
LSLVQQLSADLQSNLGVKLAWIREAALLINPADPMLARHLRPVLEGVYAALQAAAGRLQG
AEANSCRLAMHAFNRLFNLV
NT seq 3123 nt   +upstreamnt  +downstreamnt
atggcggtgccaggagcgggcctgctggccctcctgcgcaaacgcactgcaagcaagttt
gaggcgcgcagctctgcggtgcacgcgctggagcacgcagtggcagccggcacggtcgca
gaggcggcacggccgcaggcgcaggggcgccgcatcccgccggggcccagatatacgtat
gacgttgacacccatgtgccccatgaggcgcagccgcagctgccggtgactccagtcacg
ctgatcaacaccgactatgcgctgcaccactggaggcagatcgccgtcggccccagctac
atctgctacggcctcaagcagggccacatccgcgtgttgagtcgccactcggctgtgcga
gcccttctcaagggccacaccaagcccctcaccgacctgcagtttgcggcggcctcgccc
gacgcagggcatgacagcggcagcagcagtgcgtccagtgcattcaacgaagtgctgctg
gccagtggcggccatgacggtcagctgtttgtgtggcacctgcaactggatgaggacaat
gccaccatccgcgagacacagcagctgcatgccagctttgcgtcggcagcaggtgtttca
ggagacgtgctgttgtcatggcacgcgcccagccggcgcgtgcttgcggtgggggtggga
ggcaaagtgctgcttgtgtctgtgcctgctgacggcggcatggagcagctggagttcgac
ctcgatgataactctacgccagatgccactgtactgcccgactggagtggcgaggcggtg
acgtgcctggctttctcacctgacggccagctgctggctgctggcggcgctgccggctcc
gtgctcgtgtggcagctgcaatccttatcagccgcggggcccggcggcagctcctcactg
gtggccacccacagcgtggcaatccttgctgccgctgacaatggcactgctgctggcgct
gcggtcggcgcagtgtgctggctacccatgcctcagggctgggcgcttgtgacgggcaac
cgcaacaatgctgcgcttcagctgtggcacagtgtttccctggagggcagttggaagctg
ctccaaaccctgcagtttgagggcaagagcgggcagcaggagttttacagccacgtggat
gtggtgcccgcccagcagctggtggtgctggcagacaccgcgcgcaaggcaatctacacg
ctgcactactcgggttcgggtgccgacctgcagtttgattacgttgctcgctttggcgtg
gcagtcccgatactgtctttcactgctttgtggaaccccgcgggtggcgagcagggcgac
agcccgctagtggaactcaactgcgtgcagaccacggcggtgcagcagtacagcttggac
cccgcgctgtgctatgctgcgccggacgtatcgccagagcctcaggagcacggcgttgtg
cgccgcagcagcctgctggagcggcacggccaagacttgagcatcaagccgcagccttcg
actgccgtgcccatgccctcagaagctcttgctagcggcacacctcgcaatagctgcgtg
gcagcagctggcatcgcccctcccgcagccgtggcggcagcagagagggcggctgagccg
gtggcggctgatgccagcgaggcgagggcggcagacgcggcaccagcgccgctgcttgag
cccagcatcgaaggcgtcgtgccgctactggccagcatcccaccgctgccgcctgccgat
gcaccagagtcaccacagcccagggcaagcgggctgctgctggctgccagctgtccgcct
gcccatgcctttgcatgcagtagctctgcaaccactagccgcaattcagcttctggcagc
accgatgccggccagtggggcggccctgcacagccgcagccgcagcacgtgctgcagcgc
cggatcgttaatgcagctgctttgccacctccgtcagcagccagggaggcgacaggggat
gaggggcaggtggcattgccgccctcgccggccccaccagctacggctgttgccagcacc
caggatgcggctgtggcagctgcagtgctggagcagatggggggcgtgcacaaaaagttt
gtggggcatgtgtcgctcatgtaccgcgaactgctcaaggccatgaaggctgagcttggt
gtgcagacggcacagcaacagcaggccactgcacagctgctggcagcagctatggaggcg
cagaagcaacagatcgaggcggagcgggctgctgtcctagccgaggagcgagccaacatt
gaacgcctgctcaccgccatctccgccaccctcaaccaagacctgccttcaaagctggcc
gaggctgtccggggcgaggtggatggcatggtagacgggctggccgctgctttggtgccc
gcggtgcagacagcgttggccacctcgctgcccaaggatcttgcaggcgctgttaagtca
gcaggcctggacaaggcgctggcacccgcagtggcggctgggctggggaagccgctgcag
gaggccttccgcaccgccttcaccaagcagttggtgccagcatttgagggagccacgcag
tccatgttccagcagatcaacaccacgtttactgctggcttcgagcagcacctgcaggcc
tccaactcggcgctggcggcatccctccaagcgcaacagcagttgctgcgggcgcaccct
gcgaccacagtggatgtgcgcggcgagctgtcctcgctgctgcgggcgggcgagtatgaa
caggccttctctcgggcgctgggcctgcaggacgtgtccaccgtgggctggctggctagc
cagactgacgcagcttcggtgctggggtgcgacccctgccccctctctcaagggatcctg
ctcagcctggtccaacagttgtctgctgaccttcaatccaacctgggcgtgaagctggcc
tggatccgggaggcggcgctgctgatcaaccccgccgacccgatgctggcccgccacctg
cgccccgtgctggagggggtgtatgccgcgctgcaggctgcggcggggcggctgcagggc
gccgaggccaacagctgtcggctggcgatgcatgcattcaatcggttgttcaatttggtt
tga

DBGET integrated database retrieval system