KEGG   Chlorella variabilis: CHLNCDRAFT_55997
Entry
CHLNCDRAFT_55997  CDS       T02924                                 
Name
(RefSeq) hypothetical protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
cvr  Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:cvr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cvr03016]
    CHLNCDRAFT_55997
Enzymes [BR:cvr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     CHLNCDRAFT_55997
Transfer RNA biogenesis [BR:cvr03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    CHLNCDRAFT_55997
 Prokaryotic type
   tRNA splicing ligases
    CHLNCDRAFT_55997
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-GeneID: 17358377
NCBI-ProteinID: XP_005850548
JGI: ChlNC64A_1_55997
UniProt: E1Z704
LinkDB
Position
Unknown
AA seq 487 aa
MPVRTFDQEMGFIQQLSPYHYRVAAGFVPGMSVPGVFYVNDRLKGLLFEELQAYCQRGEH
GGFLPAVKQLANVAALPGIVKKSIALPDVHSGYGFAIGNVAAFDMADPQAVVSPGGVGFD
INCGVRLIRTNLTESDVADVREQLAQALFDHIPVGVGSQGIIPTTARDLEEALEMGMDWS
LREASRRLQGGYSWAQDKEHWEEYGGMVGGEPSKVVDEVFDRVAARKMGIDQVGQVCVMI
HSGSRGLGHQVATDALVGMERAMARDGILTNDRQLACARIGSQEGQDYLTAMACAANYAW
VNRSSMTFLCRQAFAKMFGSTPDDLDMHVVYDVSHNIAKVEEHLVDGQLKTLLVHRKGST
RAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEKGMGETFGSTCHGAGRARSRNN
SRNKLDYQQVLDALKTKGIAIRVASPKLVMEEAPESYKDVSEVVDTCHSAGISKKTVKLR
PIAVVKG
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgccagtcaggaccttcgatcaggagatggggttcatccagcagctgagcccctaccac
taccgcgtggcggcggggtttgtgccgggcatgtcggtgccgggcgtgttttacgtcaac
gaccgcctcaaggggctgctgtttgaggagctgcaggcctactgccagcgaggcgagcac
ggtggcttcctccccgccgtcaagcagctggccaatgtggccgcgctgcccggcatcgtt
aagaagtccatagcgctgcctgacgtgcacagcgggtacggctttgccatcggaaacgtg
gccgccttcgacatggccgacccgcaggcggtggtgtcgcccggaggagtggggttcgac
atcaactgcggcgtgcgcctcatccgcaccaacctcacagagtctgacgtggcggatgtg
cgggagcagctggcgcaggccctgtttgaccacatccccgtgggcgtgggcagccagggc
atcatccccaccaccgcccgggacctggaggaggcgctggagatgggcatggactggagc
ctgagggaggcaagcaggcggctgcagggggggtactcttgggcccaggacaaagaacac
tgggaggagtatgggggcatggtggggggcgaaccctccaaagtggtggacgaggtgttt
gaccgcgtggcggcccgcaagatgggcatcgaccaggtcgggcaggtgtgcgtgatgatc
cacagcggcagccgcgggctgggccaccaggtggccacagacgcgctggtgggcatggag
cgggccatggcgcgggacggcatcctcacaaacgaccgccagctggcgtgcgcgcgcatc
gggtcgcaggagggccaggactacctgaccgccatggcctgcgccgccaactacgcctgg
gtcaaccgctcctccatgaccttcctgtgccgccaggcctttgccaagatgtttggctcc
acccccgacgacctcgacatgcacgtggtgtacgacgtgtcgcacaacattgccaaggtt
gaggagcacctggttgacgggcagctgaagacgctgctggtgcaccgcaagggctccacc
cgcgccttcccgccccaccacccgctcatccccgtggactaccagctcaccgggcagccg
gtgctcatcgggggcaccatgggcacgtgcagctacgtgctgacaggcacggagaagggc
atgggggagacgtttgggtcgacgtgccacggcgcggggcgggcacgcagccgcaacaac
agccgcaacaagctggactaccagcaggtgctggatgcgctcaagacgaagggaatcgcc
atacgcgtggccagccccaagctggtgatggaggaggcgcccgagagctacaaggatgtg
agcgaggtggtggacacgtgccactcggcgggcatcagcaagaagacggtcaagctgcgg
cccatagcggtggtcaagggatga

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