Chlorella variabilis: CHLNCDRAFT_57565
Help
Entry
CHLNCDRAFT_57565 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
cvr
Chlorella variabilis
Pathway
cvr03440
Homologous recombination
cvr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CHLNCDRAFT_57565
03460 Fanconi anemia pathway
CHLNCDRAFT_57565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cvr03400
]
CHLNCDRAFT_57565
Enzymes [BR:
cvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CHLNCDRAFT_57565
DNA repair and recombination proteins [BR:
cvr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
CHLNCDRAFT_57565
FA (Fanconi anemia) pathway
Downstream FA components
CHLNCDRAFT_57565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
AAA_34
HBB
Motif
Other DBs
NCBI-GeneID:
17355960
NCBI-ProteinID:
XP_005848794
JGI:
ChlNC64A_1_57565
UniProt:
E1ZBS7
LinkDB
All DBs
Position
Unknown
AA seq
1523 aa
AA seq
DB search
MPNYTIGGCQVHFPHKAYGVQLSFMNKVIAALEGGHNALLEAPTGSGKTLSLLCSALAWQ
VREKQRIEEGLAAEKAAAAEAAAGGGDPAAAAMGEAGQGPPCPLGGSAGCAHPGSSSGCG
PSAAAEAGAGDGGFMADAAAQEAPAPRRKPPKIFYATRTHSQIAQARRRGGLVSGGGGGV
LGGGGGAGAVVVKELKRCEYKPRMAVLGSRKHYCINQHATRQGSIDEACEELLKESQCQY
FKNVHSFVSSGFQYRLHDIEDLKGMGRSNKACPYYTARKWADEAEVIFAPYSYLIDPVIR
RAMAVDVEGCMLVFDEAHNMEDVCREAASTEVDLATMAEVLGCFQKAHDLNGRQEVYGPL
VGCARAVVAWMEDKQRAAARQMQQQAQRGGGGGGGGRGGGRQAARYQDAYERMFPAKEML
GELSACGLGPDAVDALWEAYQLAREEEEAMGQAAAAGGGGPLGGSSGGGNKENQQGGESA
ATGPKTGAAVRVGAMALGVMSRLIQVVRMLHQGSDDGARDYRLVVQRYYENSPTLAMGRY
KSRGGGGGGGGGGDDDSFLPGFAFKMCLWCMNPAVAFRPVAQAAHSVVLTSGTLAPLEGF
ASELGTPFAITLEAPHVVDMRRQVWAGVVGAGPGGTPLNATWKNQNEAGFQDGVGRLILE
GAASIPDGLLVFLPSYVLLDKLMARWKFSGLLAQLEALKKVVQEPRGGGQDALKKTMQEY
YAAIQAGGGAAFFAVCRGKVSEGLDFADGNARGVIIVGIPFPAAKDLKVQEKKAFNDRGQ
RQLSLVSGDVWYSQQAFRALNQAGWPGRRLMGRPMPLSSCGKLSRVDAARLTSLPARRRR
VRGALAVHPTFEAGMQSMAAFFAAIQADPPGPPPGVPKPAGATSADTEMAAAVAAAVAAA
VPAQALQEAATAAAMAAGRGVEGALSLWGPGGAGAAGGGQQAAGTILGLYQMWQAKPLGQ
ARAAGGAAGGAVAGGGVCGGGGMAGLDQWSRQAAVKEVPKQPQPQHQHQQRAAPFPQHGP
AGGQRQQQQPGGGLGPLQHPQHPQQHQQHQPAFGYYVRPPSAERCHSPPDAAGKLQRVLQ
GAPLAAWVQQDVSDCLAFLRASGIGEGALPAGYTSLLAVAVDGVKDAFQAASEYLGEGRA
VHHLAAEWRCALPRGLQALMGAGPAAFPEGKPWDAGARAFGEQRLRGWADGALLAATRAA
YEAQLAALLQRGSLGSPPADGQQQAHPQQQQQQHPQLAGSWHQQQQAGMVPPAGGAAAPA
HTPPGSMGWQHEAQAGDTLRMEWAQPQGQQQQRQDQQQQYSLPPHTVPPLQHQYHPGYPH
QQQQQGWGQPGAGAHQWQQYQQYQPPQHSWQQQWGQQPQPAQPHHPPPLQAAPPPQGWAQ
HNRFPPQHLARAHAPPPQQQQHGQGQAGPAQQPVPPQQQVWQGAPAAAAAPAPHNPPAQQ
APQHQPQAPAAQQGAKRGPQAANGEQQNQAKKRYLHGKNAEAAARSRAAGGGGAAGGAAG
YDAAQRAAIAHTIHSSGDDSDFR
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgcccaactacaccataggcggctgccaggtgcacttcccgcacaaggcctacggcgtg
cagctgagtttcatgaacaaggtcatcgcggcgctggagggcgggcacaacgcgctgctc
gaggcgcctaccggctccggcaagacgctgtcgctgctgtgctcagcgctagcctggcag
gtgcgggagaagcagcgcatagaggaggggctggcggcggagaaggcggcggcagcagaa
gccgctgcagggggcggcgaccccgccgctgccgccatgggcgaggcggggcagggcccg
ccttgcccccttggcggatcggcaggctgcgcacacccgggtagcagcagcggctgcggc
ccctcggccgccgccgaggccggggctggcgacggcggcttcatggctgacgccgcggcg
caggaggcgccggcgccccgccgcaagccccccaagatcttctacgccacacgcacccac
tcccagattgcgcaggcaagacggcggggcggtttggtttcggggggaggcggcggtgta
ctgggtgggggtggcggagctggcgccgtggtggtgaaggagctcaagcggtgcgagtac
aagccccgcatggcggtactgggctcccgcaagcactactgcatcaaccagcacgccacg
cggcagggcagcatcgacgaggcgtgcgaggagctgctgaaggagagccagtgccagtac
ttcaagaacgtgcactcctttgtgtcctcgggcttccagtaccgcctgcacgacatcgag
gacctgaagggcatgggccgctccaacaaggcctgcccctactacaccgcccgcaagtgg
gccgacgaggcggaggtcatctttgcgccctactcgtacctcatcgacccggtcatccgc
agggccatggctgtggacgtggagggctgcatgctggtctttgacgaggctcacaacatg
gaggatgtgtgccgggaggcggcatccacagaggtggacctggccaccatggcagaggtg
ctcggctgcttccaaaaggcgcacgacctcaacggcaggcaggaagtgtatgggccgttg
gtcggctgcgccagagcggtggtggcgtggatggaggacaagcagcgcgcggcggcgcgg
cagatgcagcagcaggcgcagcgcggcggcggcggcggcggcggcgggcgcggcggcggc
aggcaggcggcccgctaccaggacgcctacgagcgtatgttccctgccaaggagatgctg
ggtgagctgtctgcctgcgggctgggccccgacgcagtggatgcgctgtgggaggcgtac
cagctggcgagggaggaggaggaggcgatggggcaggcggcggcagcgggtgggggcggt
ccactgggcggcagcagcggaggaggcaacaaggagaaccagcagggcggggagagcgcc
gccaccggccccaagactggcgcggctgtgcgggtgggtgccatggcgctgggcgtcatg
tcgcgactcatccaggtcgtgcgcatgctgcaccagggcagcgacgatggcgcccgcgac
tatcgcctggtggtgcagcgctactacgagaacagccccaccctggccatgggccgctac
aagagcagaggcggcggcggcggtggtggcggcggcggcgacgatgactccttcctgccc
ggctttgctttcaagatgtgcctgtggtgcatgaaccccgcggtggccttccgcccggtg
gcccaggccgcgcacagcgtggtgctgaccagcggcacgctggcgccgctggaggggttt
gcctcggagctgggcaccccctttgccatcaccctggaggcgccacatgtggtggacatg
cggcggcaagtgtgggcgggcgtggtgggcgcggggcccggcggcaccccactcaacgcc
acgtggaagaaccagaacgaggctgggttccaggacggcgtggggcggctgatcctggag
ggcgccgcctccataccggacggactcctcgtcttcctgccctcctacgtgctcctggac
aagctgatggcaaggtggaagttctcgggcctgctggcgcagttggaggccctcaagaaa
gtggtgcaggagccgcgcggcggcggccaggatgcgctgaagaagacgatgcaggagtac
tacgccgccatccaggcggggggcggggccgccttcttcgcagtctgccgcggcaaggtg
tctgagggcctggactttgccgacggcaatgctcggggcgtgatcatcgtgggcatcccc
ttccccgccgccaaggatctcaaggtccaggagaagaaggcgttcaacgatcgcgggcag
cgccagctcagcctggtgtcgggcgatgtgtggtactcgcagcaggccttccgcgcgctc
aaccaggcgggctggccaggccgccgtttgatgggacgccccatgccgctctcaagctgc
ggcaagctcagccgcgtcgatgccgctcgcctcaccagcctgcctgcgcggcggcgcagg
gtgcgtggcgcgctggcggtgcaccccacctttgaggcgggcatgcaatccatggctgcc
ttcttcgccgccatccaggctgaccctccggggccgccgccaggcgtgcccaagcccgcc
ggtgccacgtcagccgacacggagatggcggcggcggtggccgcggcagtggccgccgcc
gtgccggcccaggcgctgcaggaggcggccacggcggcggccatggcggcgggccgtggc
gtggagggcgcgctcagcctctggggacctggcggtgccggtgccgcgggtggcggccag
caagctgccggcaccatcctggggctctaccagatgtggcaggccaagccgctggggcag
gcgcgggcggctggaggagcggcgggaggcgcagtggcgggcggcggcgtctgcggcggc
ggcggcatggcgggtctggaccagtggagccgccaggccgcggtgaaggaggtgcccaag
cagccccagccccagcaccagcaccagcagcgagccgcgcctttcccccagcacggccct
gcgggcggccagcggcagcagcagcagccgggtggtggcctcggcccgctccagcaccct
cagcaccctcagcagcaccagcagcaccagcccgcattcggctactacgtgcggcccccc
agtgccgagcgctgccactccccgcccgacgccgcggggaagctgcagcgggtgctgcag
ggcgccccgctggcggcctgggtgcagcaggacgtgtcagactgcctcgccttcctgcgc
gcctctggcatcggcgagggggcgctgcctgcaggctacacctcgctgctggcggtggcg
gtggatggggtgaaggatgcgttccaggcggccagcgagtacctgggcgaggggcgcgca
gtgcaccacctggccgcagagtggcggtgtgcgctgccgcggggcctgcaggcgctcatg
ggcgccggccccgccgccttccctgaggggaagccctgggatgcgggggcacgggcgttt
ggggagcagcggctgcggggctgggccgacggcgcgctgctggcggcgacgcgggcggcg
tacgaggcgcagctggcggcgcttttgcagcgcggaagcctcggcagcccgccggcggac
gggcagcagcaggcccacccgcagcagcagcagcagcagcacccccagctggcaggcagc
tggcaccagcagcagcaggccggcatggtgccgccagcgggaggcgctgccgcgcctgcc
cacaccccgcccggcagcatgggttggcagcatgaggcgcaggcaggggacacacttcgc
atggagtgggctcagccgcagggccagcagcagcagcggcaggaccaacagcagcagtac
agcctgccaccgcacacggtcccgcccctccagcaccagtaccaccctggctaccctcac
cagcagcagcagcagggatgggggcagcctggcgcaggcgcccatcagtggcagcagtac
cagcagtaccagccgccgcagcacagctggcagcagcagtggggccagcagccgcagccg
gcgcagcctcaccaccctccgccgctgcaggccgcgccgccgccgcagggctgggcgcag
cacaaccgcttccctccccagcacctggctcgcgcccacgctcctcctcctcagcagcag
cagcatgggcagggtcaggcgggccccgcacagcagccggtgccccctcagcagcaggtc
tggcagggcgctcctgccgccgccgccgcccctgcccctcacaaccctccggcacagcag
gcaccccagcaccagccacaggcgccggcggcgcagcagggcgccaagcgggggccccag
gcagccaacggtgagcagcagaaccaagccaagaagcgatacctgcacggcaagaatgcc
gaggcggctgcccgcagccgcgcggcgggcggcggcggcgcggcgggcggcgcggcgggc
tatgatgccgcgcagcgcgccgccatcgcccacaccatccactccagcggtgacgattct
gacttccgctga
DBGET
integrated database retrieval system