Chlorella variabilis: CHLNCDRAFT_58007
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Entry
CHLNCDRAFT_58007 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K14771
U3 small nucleolar RNA-associated protein 19
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvr03009
]
CHLNCDRAFT_58007
Ribosome biogenesis [BR:
cvr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CHLNCDRAFT_58007
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBF
Motif
Other DBs
NCBI-GeneID:
17354719
NCBI-ProteinID:
XP_005847522
JGI:
ChlNC64A_1_58007
UniProt:
E1ZG78
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MVLTRRHPLAHLSSQPIPARCHLRLQATPVLHHLRIFFIDCFDRGDLSVKPVPAEDQSAE
AVYAAWLHRQYGAYQAGLLRLLGDAAVDARTQVAAFMAVMECVRGERPGVFNNRLFHRLL
AVLLTCAGTAPEVLGLLIGKLLELADVRYFTLASIIRIAQPARQEQQAQQQQGAATGANG
APAAAAGGSREDDSSDEDGEEGGGGGGGSVSWHDLARTVFDVLAEMPAAPAADEELRSWC
GAAEVGIVAAANAGEGARQRKRQRLAAEAAAAAGAAAGEQQRAKWASAKAQQRMYSEAWL
ALLRLELPEDVGKRVLARVQDLIIPALVNPLLLADFLTDTLDRGGLTGMLALDGIFVLVT
RHGLEYPNFYARLYQLLTPQAFHAKHRARFFALADVFLASGMVPAYTAAAFVKRLGRLAL
AAPPAGALLALAFMHNVVRRHPATMQLLHRPPRGGLAGVAGAAAPPPPAAPQPLLPLPPE
VAGGGSSAALRANGAASPGEDDDAPAAAAVGVAAGPEAGQSPQPAEQAAQQQQQGPVWQG
HDVYDFREPDPGRSRALESSLWELEALRQHHNPQVAAFCSLLDKDLRDRKKTSEADISEL
LPASYASMFAAEASRRLKAVPTAFYRAPPEALFGGEAAPDFPGWRLDLSTVAGGCLRLPG
QAVLPTLGEAPAAAMLEFWSTQLTPGLVGGAAASLIVPEGKVLCITSITAQGCPAQSMQR
FPLWTDAVLTLVVTCGNRPPAQLWRSDWVRHKYDSVRMYWVPHFGGACFSPHVLLSSGGV
TFTASFTLPDGTPLGGEMAPWTGSNAPTVHIVGHLLPEDQAGDFSGKRLRILATLRFTDV
REEAAFGRWHAARMARVDALACLAKGSLLALQGSLGVSLLAVPYFVRDWLVGADLSRLGL
LLPLLILASPYLYQKYLATRERLILSVHVISVLCSCGHCMLALAGMRPRLAAQHERWCIC
LPTSLLLFQARPRIAPPPPPA
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcacccgccgccacccgctcgctcacctgagctcgcagcccattccagcacgt
tgccacctgcgcctgcaggccacgcccgtactgcaccacctgcgcattttcttcatcgac
tgctttgaccggggcgacctgtcggtcaaaccggtgccggcagaggaccagtctgctgaa
gcggtctatgccgcctggctgcaccgccaatacggcgcctaccaagccggcctgctgcgc
ctgctgggcgacgccgctgtggatgcccgcacccaggtggccgccttcatggcggtgatg
gagtgcgtgcgcggcgagcgccccggcgtgttcaacaaccgactcttccaccgcctgctg
gccgtgctgctcacctgcgccggcaccgcgccagaggtgctgggcctgctcatcggcaag
ctgctagagctggcagatgtgcgctacttcactctggccagcatcatcagaatagcgcag
ccggcacggcaggagcagcaggcgcagcagcagcagggcgcggcgacgggcgccaacggg
gcgccggcagcggcggcggggggctcgcgcgaggacgacagcagcgacgaggacggggag
gagggcggcggcggtggtggcggcagcgtgagctggcatgacctggcgcggactgtgttt
gatgtgttggctgagatgccggccgcgcctgccgccgacgaggagctccggtcgtggtgc
ggcgccgcagaggtaggcatcgtggcggcagccaacgcgggagagggggcgcggcagcgc
aagcgccagcgcctcgcggcggaggcggccgcggcggccggcgcggcggcgggcgagcag
cagcgcgccaagtgggccagcgccaaggcgcagcagcgcatgtacagcgaggcgtggctg
gcgctgctgcggctggagcttcccgaggatgtgggcaagcgggtgctggccagggtgcag
gacctgataatccctgccctcgtcaacccgctgctgctggcagacttcctgacagacacc
ctggaccgaggcggcctgactggcatgctggcgctggacggtatctttgtgctggtcacg
cggcacggcctggagtatcccaacttctacgcccgcctgtaccagctgctcacgccgcag
gccttccacgccaagcaccgcgcccgcttctttgcgctggcagatgttttccttgcctcc
ggcatggtgcccgcatacacggcggcggcctttgtgaagcggctggggcggctggcgctt
gcggcgccgccagctggcgccctgctggcgctggccttcatgcacaacgtggtgcgccgc
cacccggccaccatgcagctgctgcaccgcccgccgcgcggagggctggcgggggtggcc
ggcgccgcggcgccaccgccgcccgccgccccgcagccgctgctgccgctgcctccagag
gtcgccggcggcggcagcagcgcggccttgcgggccaacggcgccgcgtctccgggcgag
gacgacgacgccccggcggcggcggcggtgggcgtagcggcgggcccagaggccggccag
tccccgcagccggcagagcaggctgcccagcagcagcagcaggggccggtgtggcagggg
cacgatgtgtatgatttccgggagccagacccgggcaggagccgcgccctggagagcagc
ctgtgggagctggaggcgctgcgccagcaccacaacccgcaggttgccgccttctgctcc
ctgctggataaagacctccgtgaccgcaagaagacctcagaggccgacatatctgagctg
ctgcccgcctcctatgccagcatgtttgcggcagaggcgtcccgccgcctcaaggccgtg
cccaccgccttctaccgcgcgccgccagaggcgctgtttggcggcgaggccgcgcccgac
ttccccggctggcggcttgatctgtccacggttgccggtggctgtttgcgactccctggc
caagctgtcttgcccacgctgggggaggcccccgccgcggccatgctggagttctggtcc
acccaactgaccccaggactcgtaggtggcgcggcggcctccctcatagtgcctgagggc
aaggtgctctgcataacgagcattactgcccagggatgtcctgcacagagcatgcagcgg
ttcccgctctggacagatgcagtgctgacgctagtggtgacgtgcggcaaccggccgccg
gcgcagctgtggcgcagcgactgggtgcggcacaaatatgacagcgtgcgcatgtactgg
gtgccgcactttggcggcgcctgcttctcgccgcacgtgctactcagtagcggcggtgtc
acctttaccgcctcctttacgctgccagacggcacccccctgggcggggagatggcgcca
tggacgggctccaacgcccccactgtgcacattgtggggcacctgctgccggaagaccag
gctggcgactttagcggcaagcgcctgcgcatcttggccacgctgcggttcaccgatgtg
agggaggaggcggcgtttgggaggtggcacgccgcgcgcatggcgcgggtggatgctctg
gcctgcctggccaagggcagcctgctggcgcttcaggggtcccttggcgtcagcctgctg
gccgtgccgtactttgtgcgggactggctggtgggggcggacctgtcccgcctgggcctc
ctgctgcccctcctgatcctggcatcgccatacctctaccaaaagtaccttgccacccgg
gagcgcctcatcctgtcggtccacgtgatcagcgtgctgtgcagctgcgggcactgcatg
ctggcgcttgcgggcatgcggcctcggctggccgcgcagcacgagcgctggtgtatctgc
ctgcccaccagcctgctgctgttccaggcgcgcccgcgcatcgccccgccgccgccgccg
gcatga
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