Chlorella variabilis: CHLNCDRAFT_58455
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Entry
CHLNCDRAFT_58455 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cvr
Chlorella variabilis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvr03041
]
CHLNCDRAFT_58455
Enzymes [BR:
cvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CHLNCDRAFT_58455
Spliceosome [BR:
cvr03041
]
Complex C
Other components
Complex C specific factors
CHLNCDRAFT_58455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
HA2_C
OB_NTP_bind
DEAD
HA2_N
AAA_22
AAA_19
AAA_30
Cas3-like_C_2
SRP54
Motif
Other DBs
NCBI-GeneID:
17353207
NCBI-ProteinID:
XP_005845775
JGI:
ChlNC64A_1_58455
UniProt:
E1ZKD5
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MTSFLRPGQQSASAFGLAFDVDRDAGGAGAAPVFNKNERLAISEQRRRLPIYAHRTELLY
LVEGHATTVVVGETGSGKTTQVPQYLHEAGWTQGGKLVACTQPRRVAAMTVASRVAEEMG
CRLGQDVGYSIRFEDVSTPGVTRVRFCTDGVLLREMMDDPLLLKYSCVMVDEAHERSLAT
DVLLGLLKKIQRRRPDLRVIISSSTIEAEKMARFFDTSNVRRPRAHAEGVQQGAAPSRSP
ALLSVEGRTHNVQVHYLEAPASDYIQAAVETAVNIHREDLPGDILIFLTGQDECEAAVKL
LDEEGRRLQRSRLKLRMQAVALYAGLPAAHQLGVFEPAPRGVRKVVVATNIAETSVTLEG
TVYVIDSCFAKQRCYNPLTGLESLLIAPISKASAAQRAGRAGRVRPGHCLRLCTEGDFEQ
KLPATTVPEMQRSDLSGTVLQLKSLGIDNIMHFEWLAPPPAEASGWLGGWLGGRAGRRGG
GVVTMIRALESLHALGALDGDARLARPLGAQMADLPLDPVLARMLLAAGQMGCTAKVLTV
VAMLSVQSVWAPGGRRGVDEAKARFAVAEGDLVTYLNVWRGWEESGRSKKWAIENHVMHR
SMLRAADIRNQLQAHLRRQGIKQASALEGATSFDHDEELETVRKALAAGMFINAAKLTEE
LTVKLSDQADTGASVYRLVRSAGGSAAAVKLRIHHSSVLFRCRPQWVCFYAAEQNDSGWY
EMRDVLAIESGWLTELAGHVYKMVPLNPQMRR
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctttctgcggcccggccagcagtccgcctccgccttcggcctggccttcgac
gtcgatcgcgacgctggcggggcgggcgccgcgcctgtgttcaacaagaatgagcggctg
gccatttcggagcagcggcggcggctgcccatctatgcgcaccgcacggagctgctgtat
ctagtggaggggcacgccaccacggtggtggtgggcgagacgggcagcggcaagaccacc
caggtcccgcagtacctgcatgaagcaggctggacgcagggcggtaagttggtggcgtgc
acgcagcctcgccgcgtggcggccatgacggtggcctcccgggtggcagaggagatgggg
tgccgcctgggccaggatgtgggctactccatccgctttgaagacgtgtccacgccgggc
gtgacgcgggtgcggttctgcacagacggcgtgctgctgcgggagatgatggacgacccg
ctgctgctcaagtacagctgcgtgatggtggacgaggcgcacgagcgcagcctggccacc
gacgtgctgctgggcctgctgaagaagatccagcggcggcgccccgacctgcgtgtcatc
atctcctcctcaaccatcgaggcggagaagatggccaggttttttgacactagcaacgtg
cggcggcccagggcccacgccgagggggtgcagcagggggcggcgcccagccgcagcccc
gcgctcctgtcggtggaggggcgcacccacaacgtgcaggtgcactacttggaggcgcct
gcctcggactatatacaggcggcggtggagacggctgtcaacatccacagggaggacctg
ccgggggacatcctcatcttcctgacgggccaggacgagtgcgaggccgccgtcaagctg
ctggatgaggaggggcggcgcctgcagcgcagcaggctcaagctgaggatgcaggccgtg
gcgctgtacgcggggctgcccgcggcgcaccagctgggcgtgtttgagcccgcgccgcgc
ggcgtgcgcaaggtggttgttgccaccaacatagccgagacatcggtgaccctggagggc
accgtgtacgtcatagactcctgcttcgccaagcagcgctgctacaacccgctgacgggt
ctggagagcctgctgatcgcgcccatcagcaaggccagcgcggcgcagcgcgcggggcgg
gcagggcgcgtgcggccgggccactgcctgcggctgtgcaccgagggggattttgagcag
aagctaccagccaccacagtccccgagatgcagcgcagcgacctgtctggcaccgtgctg
cagctcaagtctctgggcatagacaacatcatgcactttgagtggctggcgccgcccccc
gcagaggcgagcgggtggctcggcgggtggctgggaggccgggccgggcggcgtggtggt
ggcgtggtgaccatgatccgagcgctggagtcgctgcacgcgctgggcgcgctggacggc
gacgcccgcctggcgcggccgctgggcgcgcagatggccgacctgcctctggacccagtg
cttgcccgcatgctgctggctgccggccagatggggtgcacggcaaaggtgctgacggtg
gtggcgatgctcagcgtgcaaagcgtgtgggcgccgggagggcggcggggggtggacgag
gccaaggccaggtttgctgtggccgagggggacctcgtgacgtacctgaacgtgtggcgg
gggtgggaggagagcgggcgcagcaagaaatgggcgatagagaaccacgtcatgcaccgc
agcatgctgcgggccgccgacattcgcaaccagctgcaagcccatctgcggcggcagggc
atcaagcaggcttcagccctggaaggtgccacctcgttcgaccatgatgaggagctggag
actgtgcgcaaggcgctcgcggccggcatgttcatcaacgccgccaagctgaccgaagag
cttaccgtgaagctgtcagaccaggctgacaccggggcctccgtgtaccgcctggtgcgc
tcggcaggcggcagcgctgccgcggtcaagctgcgcatacaccactccagcgtcctcttc
cgctgccgcccgcagtgggtctgcttctacgccgcggagcagaacgacagcggctggtat
gagatgcgggatgtgctggccattgagtcaggctggctgactgagctggcgggacacgtg
tacaagatggtaccgctcaacccacagatgcggcggtag
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