Chlorella variabilis: CHLNCDRAFT_58500
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Entry
CHLNCDRAFT_58500 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
cvr
Chlorella variabilis
Pathway
cvr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CHLNCDRAFT_58500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvr03009
]
CHLNCDRAFT_58500
Ribosome biogenesis [BR:
cvr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CHLNCDRAFT_58500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
17353066
NCBI-ProteinID:
XP_005845823
JGI:
ChlNC64A_1_58500
UniProt:
E1ZKN0
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MLVDEGPGRHEAELESLLFGRDEQALEQLGQEAVDDDEAHGSALAAFLRSYAAGAAAADE
DQIMDERDEEEGRRQRQHGGGGLLLYEDRRGANKVPPASARQQRKRPAWEDPQDAHLRVN
VAARNQLRKLRQAEDEVELTGQQYEQRLRQQHNKLNPRTAWASVKKASKQRQRAAEHGDA
GSDTEDEAAEAAERLLQRAGGLLARGAALPPSMLETTRLKDANQTEPCKGAVKSVEFHQN
GELLLTAGLDRRVCLFTVDGVKNQRAASWFIEDMPVHKAAFAAGGSKVVLSGRRRFFYLL
DVESRAVERLASLRAWRDEKSFESFVTSQHSPQPIAAFFGNEGHVPLVSLHTKQMVGTLK
MNGTARTGAFTADGTQLLTSGGDGTVYVWDLRTQRCLQRHQDEGCLNGASMACASDGTLF
ATARIMDKCAGKPLKTVLNLTTSIDTLAFNHDCQMMVMASRLKRDALRVVHVPTMTVFSN
WPTSKSPLHYVHDAAFSPNSGYLAIGNARGRVLLYRLHHYSRA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgctagtcgacgaggggccggggcggcatgaggcggagctcgagagcctgttgtttggc
cgggacgagcaggcgctggagcagctaggccaggaggcggtggacgacgacgaggcacac
ggcagcgcactggccgcctttttgcggtcgtatgctgcaggcgcggcagcagcagacgaa
gaccaaatcatggatgagagagacgaggaggagggccggcgccaacggcagcacggtggg
ggtgggttgcttctgtatgaagaccgccggggcgccaacaaggtgccgcccgccagcgcg
cggcagcagcgcaagcgtccggcatgggaggacccccaggatgcacacctgcgggtcaat
gtggcggcccgcaaccagctgcgcaagctgcgccaagcagaggatgaagtggagttgaca
ggccagcagtacgagcagcgtttgcggcagcaacacaacaagctcaacccacgcacagcg
tgggccagcgtaaagaaggcgtccaagcagaggcagcgagcagcagagcatggcgatgcc
ggcagcgacaccgaggatgaagcggccgaagctgccgagcgcctgctgcagcgagcgggt
ggcctgctggcccgcggcgccgcactgccaccgagcatgctggagacgacgcggctcaag
gatgccaaccagactgaaccctgcaagggtgctgtcaagagcgtggagttccaccagaat
ggcgagctgctgctgaccgcgggcctggatcgccgggtttgcctgttcactgtggatggc
gtgaagaaccagcgcgctgctagctggtttattgaggacatgccagtgcacaaggcggcc
tttgcagcgggcggcagcaaggtggtattgagtggccgccgccgcttcttctacttgtta
gatgtggagtcgcgggcggtggagcgcctggcctcgctgcgtgcatggcgcgatgagaag
agcttcgagagctttgtgaccagccaacacagtccgcaacccatcgctgccttctttggc
aacgaggggcacgtgccgctggtcagcttgcacaccaaacagatggttggcacgctgaag
atgaatgggactgcccgcaccggtgccttcaccgccgatggcactcagctcctcaccagc
ggcggcgacggcacagtgtatgtctgggacctgcgcacgcagcgctgcttgcagcggcat
caggacgaggggtgcctaaacggcgccagcatggcctgcgcgtctgacggcaccctcttc
gccacagcaaggattatggacaagtgtgcaggcaagcctctcaagacggtgctgaacctg
accaccagcatcgacacgctggctttcaaccacgattgccaaatgatggtcatggcgtcc
aggctaaagcgtgacgcgctgagggtggtgcatgtgcccacgatgaccgtgttcagcaac
tggccgacctccaaatcgcccctgcactacgtgcacgacgcagccttcagcccaaacagc
ggatacctggccatcggcaacgcgcgcggccgtgtgttgctctaccgcttgcatcactac
agcagggcttag
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