Chlorella variabilis: CHLNCDRAFT_59036 Help Entry CHLNCDRAFT_59036  CDS       T02924                                  Name (RefSeq) hypothetical protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism cvr  Chlorella variabilis Pathway cvr03020   RNA polymerase cvr03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:cvr00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     CHLNCDRAFT_59036   09124 Replication and repair    03420 Nucleotide excision repair     CHLNCDRAFT_59036  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cvr03021]     CHLNCDRAFT_59036    03400 DNA repair and recombination proteins [BR:cvr03400]     CHLNCDRAFT_59036 Enzymes [BR:cvr01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      CHLNCDRAFT_59036 Transcription machinery [BR:cvr03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      CHLNCDRAFT_59036 DNA repair and recombination proteins [BR:cvr03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       CHLNCDRAFT_59036 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 Motif Other DBs NCBI-GeneID:  17351501 NCBI-ProteinID:  XP_005844289 JGI:  ChlNC64A_1_59036 UniProt:  E1ZPQ6 LinkDB All DBs Position Unknown AA seq 1175 aa AA seqDB search MYGLEDEGLSPSAAAEIDDQDAWAVISAYFEEKGLVRQQLDSFNDFINTSLQEIVDENKL ISITPQSQHVPGMQVEDDVEKIFEVEFGQIYLSKPVFIEADGETAVLFPKEARLRNLTYA APLYVDIERRDKVVHSDGSEEVEVTPYPKVFLGDVPIMLRSDYCNLSGRSERDLCDLGEC PYDQGGYFVINGSEKVLIAQERMANNHVYVFRKSQPSKYAYVAECRSVVEGSTRTVSTMQ VKMLSRAGQKGAGQCIRASIPYVRADIPILIIFRALGFVADKDILEHIVYDFGDTTMMEA LRPSIEEAFPIQSQEVALDYIGKRGSTIGATRNARIQYARELLQKELLPHVGMEEFCETK KAYFFGYVIHRLLLVALGRREEDDRDHYGNKRLDLGGPLLANLFRQLFRKLSKDVRGYVQ KCVDKGKEINLTSAINKDTITRGLRYSLATGNWGVVGAGEVRPGVSQVLNRLTYASTLSH LRRINSPIGREGKIAKPRQLHNSQWGMICPAETPEGQACGLVKNLALMTYISVGCASNPV LDFLQEWATEDLEEISPSVIPKATKIFVNGVWVGIHRDPQTLVETLRAMRRQVDISTEVG VVHDIRLQELRLYTDYGRCCRPLFIVEDQAVKVKKRDIINLQNREETGFTWQSMIEAGYI EYVDVEEEETTMIAMFINDLRLARIAEDAATASSIALYTHCEIHPAMILGVCASIVPFPD HNQSPRNTYQSAMGKQAMGMYVTNYQVRMDTQGYVLFYPQKPLVTTRNMEYLHFRELPAG INTIVAIACYSGYNQEDSTMMNQSSIDRGIFRSIFFRSYKTEEKKQGSLVQESIERPNRE ITAGTRHGTYDKLDDDGIAPPGTRVSGDDIVIGKTSPIPDDGSGLPQRYSKKDASTALRH SESGMIDSVLVTTGADGQRFVKMRVRSVRIPQVGDKFASRHGQKGTIGITYTQEDMPFSA EGISPDLIINPHAIPSRMTIGHLVEALMSKVAACMGKEGDATPFTSVTVDNISAALHRCG YQSRGWEVMYNGHTGRQLQAQIFLNPTYYQRLKHMVDDKIHSRGRGPVQILTRQPVEGRA RDGGLRFGEMERDCIISHGAAAFLKERLYDQSDAYRVHVCSVCGLIAVANLKKNQFYCTA CKNTTGIVQVFIPYACKLLFQELMAMCIAPRMIVD NT seq 3528 nt NT seq  +upstreamnt  +downstreamnt atgtatggcttggaggacgagggcctatccccctcagcggccgctgaaatcgacgatcag gacgcatgggccgtcatctcagcctactttgaggagaagggcctggtgcggcagcagctc gactccttcaacgacttcatcaacacgtcgcttcaggagattgtggatgagaacaagctg atctccatcacgccgcagagccagcacgtgccgggcatgcaggtggaggacgatgtggag aaaatattcgaggtggagtttggacaaatctacttgtccaagccagtctttatcgaggct gatggggagacggcggtgctgttcccaaaggaggcgcggctgcgcaacctcacctatgca gcgccgctttacgtggacattgaacggcgggacaaggttgtacactcggatggcagcgag gaggtggaggtcaccccctaccccaaagtgttcctgggcgatgtgcccatcatgctgcgc tcagactattgcaacctcagcggccgaagcgagcgcgacctgtgcgatctgggggagtgc ccatacgaccagggcggctactttgtgatcaacggcagcgagaaagtgctgattgcacag gagcggatggccaacaaccacgtctatgtgtttcgcaagagccagccctccaagtatgcc tatgtggcagagtgcaggtcggtggtagagggcagcacgcgcacagtgagcacgatgcag gtgaagatgctgtcgcgggcggggcagaagggggcggggcagtgcatccgggcctccatc ccctacgtgcgtgccgacatccccatcctcatcatcttccgcgccctgggatttgtggcc gataaggacatcctggagcacattgtgtacgattttggggacaccacgatgatggaggcg ctacgaccgtccatagaggaggccttccccatccagagccaggaggtagcattggactac atcggcaagcgtggcagcaccattggcgccacacgcaatgcacgcattcagtatgcacgc gagctgctgcaaaaggagctgctgccacacgtcggcatggaggagttctgtgagaccaag aaggcctactttttcggttatgtcatacaccgcctgctcctggtggcgctgggccggcgc gaggaggacgaccgcgaccactacggcaacaagaggctagacctgggtggcccactgctg gccaacttgtttaggcagcttttcaggaaactgagcaaggacgttcggggttatgtgcaa aagtgtgttgacaagggcaaggagatcaatctcacctctgccatcaacaaggacaccatc actcgcgggctcaggtactcactggcaactggcaactggggtgtggtgggcgcgggcgag gtgcggccgggggtttcgcaggtgctcaaccgcctgacctacgcctccacgctgagccac ctgcggcgcatcaactcgcccatcggccgcgagggcaagattgccaagccacgccagctg cacaacagccagtggggcatgatctgccccgcagagacgcctgaggggcaggcctgcggg ctggtgaagaacctggcgctcatgacgtatatcagtgttggctgtgccagcaatcccgtg ctcgactttctgcaggagtgggccacagaggacctggaggagatctcgccatcggtcatt cccaaggccaccaaaatttttgtcaatggcgtgtgggtgggcatccaccgcgacccgcag acgctggtggagacgctgcgcgcaatgcggcggcaggttgacatcagcactgaggtcggc gttgtgcacgatattcggctgcaggagctgcggttgtacaccgactatgggcgctgctgc cggccgctgttcattgtggaggaccaggccgtcaaggtcaaaaagcgagacatcattaac ctgcaaaaccgggaggagacggggttcacgtggcagagcatgattgaggcagggtacatt gaatacgtggatgtcgaggaagaagagaccaccatgattgccatgttcatcaacgacctg cgcctagcgcgcatagcggaggatgctgccaccgccagcagcattgcgttgtacacacac tgcgagatccaccccgccatgatcctgggcgtctgcgcatccatcgtccccttcccagac cacaaccagtcgccccgcaacacataccagagtgccatgggcaagcaggccatgggcatg tatgtgaccaactaccaggtgcgcatggacacccagggctatgtgctcttctacccgcag aagccgctggtcacgacacgcaacatggaatacctgcactttcgggagctacctgctggc atcaacaccatcgtggccattgcctgctactcgggctacaaccaagaggactccaccatg atgaatcagtcgtccatcgaccgcggcatcttccgctccatcttcttccgctcgtacaag acggaggagaagaagcaggggtcgctggtgcaggagtcaatcgagcgccctaaccgcgag atcaccgcgggcacacgtcacggcacctacgacaaactggatgatgacggcattgcaccg cccggcacacgtgtgtcaggtgacgacattgtgattggtaagacgagccccattcctgat gatggcagtggcctgccccaacggtacagtaagaaggatgcctccactgcactacggcac agcgagagcggcatgatagactcggtgctggtgactaccggcgcagatggccagcgattt gtcaagatgcgggtacgctccgttcgcatccctcaagtcggtgacaagtttgcgtcgcgg catgggcagaaggggaccatcggaatcacctacacacaggaggatatgccattcagtgcg gagggcatctcccccgacctgatcatcaacccccacgctatcccctcccgcatgaccatc ggccatcttgtagaagcgctaatgagcaaggttgcggcatgcatgggcaaggaaggcgat gctacccctttcacgtctgtcacggtcgacaacatttcagcggccctgcacaggtgcggg taccagagccgtggctgggaggtgatgtacaatggacacactgggcggcagctgcaggcg cagatctttctcaaccccacctattatcagcgtctcaagcacatggtggacgacaagata cactcgagagggcgagggccggtgcaaatcctgactcggcagccagtagagggacgcgct cgtgacggcggcctgcgctttggagagatggagcgcgactgcatcatctcacacggcgcc gctgcctttctcaaggagcgcttgtacgatcagagcgatgcctatcgcgtgcacgtttgc tccgtctgcggcctgattgcggtggccaacctcaagaagaaccagttttactgcaccgcc tgcaagaacaccacgggcattgtacaggtctttatcccatatgcctgcaagctgctcttc caggagctgatggcaatgtgcatagcgccgcgcatgatcgtagactga

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