Chlorella variabilis: CHLNCDRAFT_59111
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Entry
CHLNCDRAFT_59111 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
cvr
Chlorella variabilis
Pathway
cvr03030
DNA replication
cvr03420
Nucleotide excision repair
cvr03430
Mismatch repair
cvr03440
Homologous recombination
cvr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHLNCDRAFT_59111
03420 Nucleotide excision repair
CHLNCDRAFT_59111
03430 Mismatch repair
CHLNCDRAFT_59111
03440 Homologous recombination
CHLNCDRAFT_59111
03460 Fanconi anemia pathway
CHLNCDRAFT_59111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvr03000
]
CHLNCDRAFT_59111
03032 DNA replication proteins [BR:
cvr03032
]
CHLNCDRAFT_59111
03400 DNA repair and recombination proteins [BR:
cvr03400
]
CHLNCDRAFT_59111
Transcription factors [BR:
cvr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
CHLNCDRAFT_59111
DNA replication proteins [BR:
cvr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
CHLNCDRAFT_59111
DNA repair and recombination proteins [BR:
cvr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
CHLNCDRAFT_59111
MMR (mismatch excision repair)
CHLNCDRAFT_59111
DSBR (double strand breaks repair)
HR (homologous recombination)
CHLNCDRAFT_59111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
DUF223
Choline_kinase
Rep-A_N
CC2-LZ
End3
Motif
Other DBs
NCBI-GeneID:
17351196
NCBI-ProteinID:
XP_005843870
JGI:
ChlNC64A_1_59111
UniProt:
E1ZQS6
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MATIHQLKSRGTLEDSVSLKVAGELRMDNGKIKCQLTDGKENIQTVFTSQMAREFGGELK
SESLVRVHEGSISAIGDSHVLIVAKAELLQGGPGAAGEPASGAAEVAKQEPVSMQIEAAK
TPAAALKSSAALSKSSPCITPASHPTPPSAGWGQKMGSATKRPLQPISALNPYNNNWAIK
AKVVSKGSKRSFSRGSVFSAEVVDEQGTTIEATFWREAADHAYELLEEGKVYIFGRGNVK
PADKRYSRVRNDYALHFDTASELESCADDIDTSKMHVKMEFVPIEQLAAFVDKKMMVDIV
GVVMDVKPLGSVKRKTDQVELSRRDITLVDQSLKTVVLTMWGNAAEAAGREIEELVQQAP
VVAITACLSSLQRSAVLINPDVPEAVALRQWYDSSGRGAAMSHVGEGLATALKHSGSSAG
QERASLELFRAAAPATTQDKPHYSTVTATFAMVNPDQALFYMANPENNRKASTTAPRLCP
GFMGLLCALCVLVVEQGPGQYFCEYDGTTLSSMVRRYIFNAKVMDVSGECSVQVFNEQAE
QLLEMKADELAELRETDAKQFQEVLKSVLWKDNVLRLKAQAQCFEEDVEIGFIAGGISNA
LFKVAPALPPPEAPSEGRRAVLPPVAFRIYGDNTEQRVMFCVGDPGYITFAYCKQQAAEV
GYIPAVPHMQPEELAGPEFVPTIAASLRRFHDIPAPRQQVFANFDFAAMRAEVQTVEAAA
AAMHSPVVFAHNDLLS
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggccaccattcatcagctgaaaagccggggcaccctggaggattccgtctccctcaag
gtggcgggagaactgcgtatggacaacggcaagatcaagtgtcagctaactgatggcaaa
gaaaacattcagactgtgttcacctcccagatggcccgtgagttcggtggtgagctgaag
agcgagtctttggtgcgcgttcacgagggaagcatcagcgcaatcggcgatagccatgtc
ctgatcgttgccaaggctgagcttctgcaaggcggccccggggcggccggcgagcctgcc
agcggggccgccgaggtggccaagcaggaaccggtgtcgatgcagatagaggcagcaaag
acgccagcagccgcactcaagagttccgcagcgctgagcaagagctcgccctgcatcaca
cccgccagccatcccaccccaccgtcggccggctgggggcagaaaatggggtccgcaacc
aagcgcccgctgcagcccatcagcgctctgaacccctacaacaacaattgggcaatcaag
gccaaggtggtgtctaaaggctcaaagcgcagcttctcacgtggcagcgtgttcagtgcg
gaggtcgtcgatgagcaggggaccaccatcgaggccaccttctggcgggaggcagcagac
cacgcgtatgagctgctggaggagggcaaggtatacatttttggccgcggcaatgtgaaa
cctgccgacaagcgctacagccgcgtgcgcaacgactatgccctgcattttgacaccgcc
tcggagttggagagctgtgccgatgacatcgacaccagcaagatgcatgtcaagatggag
tttgtgccaattgaacagctggctgcgtttgtagacaagaagatgatggtggatatcgtt
ggggtggtgatggatgtgaagcccctgggcagtgtgaagcgcaagacggaccaggtggag
ctgtcgcggcgcgacatcaccctggtggaccagagcctcaagaccgtcgtgcttacgatg
tggggcaacgcagccgaggccgcagggcgagagatagaggagcttgtgcagcaggcgcct
gtcgtggccatcacagcctgcctgagcagcctgcagcgcagcgctgttctgatcaacccg
gacgtgcctgaagcagtggcgcttcggcagtggtacgactcttcgggacgcggcgctgcc
atgtcccacgtcggcgagggcctggccactgcgctcaagcacagcggctcgagtgccggg
caggagcgtgcctcgctggagctctttcgggcggcggcaccagctacaacacaagacaag
ccacactattccactgtcacagccacttttgccatggtcaaccccgatcaggcactgttc
tacatggccaaccctgagaacaacaggaaggcaagcacgacggcgccgcgtctctgccct
ggtttcatggggttgctttgcgctctttgtgtgttggttgtggagcaggggcccggccag
tacttttgcgagtacgatggcaccaccctgtcctcgatggtgcgccgctacatcttcaat
gccaaggtcatggatgtgagcggcgagtgctcggtgcaggtgttcaatgagcaggcggag
cagctgctggagatgaaggccgatgagctggccgagctgcgcgagacagatgccaagcag
ttccaggaggtgctcaagtcggttctgtggaaggacaacgtgctgcgccttaaggcgcag
gcgcagtgctttgaagaagacgtggagatcggcttcattgccggcggcatcagcaacgcg
ctgttcaaagtggcgcccgccctaccgccgcccgaggcgccatctgaggggcggcgcgcc
gtgctcccgcccgtggccttccgcatatacggcgacaacacggaacagcgagtcatgttt
tgcgttggtgatccgggatacatcacatttgcgtactgcaagcagcaggcggcagaagtg
gggtacatcccggctgtcccgcatatgcagcccgaggagctggccggccccgagtttgtg
ccgacgattgctgcctcgctgcgccgcttccatgacatccccgcgccgcggcagcaggtg
tttgccaactttgatttcgcagccatgagagcagaggtgcagacggtggaggctgccgct
gctgccatgcactcgcccgtggtgtttgcccataacgacctgctgtca
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