Chlorella variabilis: CHLNCDRAFT_6284
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Entry
CHLNCDRAFT_6284 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K12385
Niemann-Pick C1 protein
Organism
cvr
Chlorella variabilis
Pathway
cvr04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
CHLNCDRAFT_6284
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
CHLNCDRAFT_6284
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvr02000
]
CHLNCDRAFT_6284
Transporters [BR:
cvr02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
CHLNCDRAFT_6284
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
Sterol-sensing
NPC1_MLD
Patched
Folate_rec
Motif
Other DBs
NCBI-GeneID:
17358113
NCBI-ProteinID:
XP_005850565
JGI:
ChlNC64A_1_6284
UniProt:
E1Z5G4
LinkDB
All DBs
Position
Unknown
AA seq
1213 aa
AA seq
DB search
GYCATHGICGRRADGDPLSCPSNTPAQPLNATALQKLQAVCPQLAAEVGGTDYCCTEEQL
DQLQAQIQVASIFLVGCPACNHNFKHFFCLLTCSPDQATFANVTAVQPAADTGATAIAEA
DYFVAASFGARFFASCKDVVYPVMNQRAMNFVGGGARNFQEWFDFIGLVKDKRFPPTGAP
YQMDFPPGEQAPENMTALDGFIPSCGEGALACSCGDCPSAPGCEPPPQPPPPEPAGCPAL
GTSWLTCRDLSLAALYLGLLACLPLVVRLSKDQLAQSREWRRSQAAMAAAAPGGAAAGNG
SEPLLGGAGGSSAEIEEDGGGGREEEEPEELIQWPAAEQLLRRWFYRLGRCCARRPALVL
AASLLLVGACALGLTRLRVMTDPQELWVGPGSQAAQEKAAYEAAFGPFYRITQLILSTTP
AANSSTATPSGLPAIVTDEHIRLLFDMQDEIDALSASYDAPGSAGDGGGGGSWNVTLADV
CLAPLGSACATQSVLQYWGMSRDVFEHGETFLQAALCMQSCPAKVRHCCRSALGGPTDPH
LVLGGFPTDAATFRNYTADATAFVVTFPIDSHAANRGAALAWEAAFVELASGLLSEMAEG
VGLRLSFSTERSVQDELARESGSDAPTVLLSYLVMLLYIAVALGRFPRGADWRDVLSPPC
LLPCLPCRAALGLGGVLIVAASVVGSLGLCSWAGMSATLIIMEVIPFLVLAVGVDNMFIL
AAALQRQPETHPLPHRLGLALAAVGPSITLAGQWAGRAGGLGFASCEVVAFALGGLTSMP
ALRNFSICASLAVLLDYLLQVTAFVALLALDARRLEQGRYDCMPWVRWGRGGQALWSWRY
DTRYVGVSSALRSYMRRVHAPLLARPAVKAAVLALFGGMFLLSCALLPRLERGLDQSVAL
PRDSYLQRYYADVVGPPVMFVVQGLNVSEGAPDVGRVCSVAGCDPDSLLNQASRRSQPAK
QPTCPACQSSWLDDFLTWASPEIPQASSGRACLRLLTVLQCCRQDANGTRCPPPDQPPCS
DSPDACADCTACFAPSDLPGGRPDLQQFQDKLPWFLDSLPSAACAKGGAGAYTDAIQARR
RHLHPYACRRSSSIGSKPAYAVRAFTASASERLGLRLLPYSVFHIFFEQYLTIGGEALTL
LGSACVAIFLICLAATGSPWSATLIVLTLCMLLVDVMGFMVLAGIQLNAVSLVNLVMSLG
IGVEFCAHLVHAF
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
ggctactgcgccacccacggcatctgcggccgccgtgccgacggcgacccgctcagctgc
cccagcaacacccccgcgcagcccctcaacgccaccgcgctgcagaagctgcaggcggtc
tgtccgcagctagctgcggaggtggggggcaccgactactgctgcaccgaggagcagctg
gaccagctgcaggcgcagatccaggtggcgtccatcttcctggttggctgccccgcctgc
aaccacaacttcaagcacttcttctgcctcctcacctgctcgccagaccaggccaccttc
gcaaacgtgacggcggtgcagcccgcggcagacaccggcgccaccgccatcgcagaggca
gactactttgtggcagcctcctttggcgcccgcttcttcgccagctgcaaggatgtggtg
tacccggtgatgaaccagagggccatgaactttgtgggcggcggcgcgcgcaacttccag
gagtggtttgacttcatcggcctggtcaaggacaagcgcttccctcccacgggcgccccc
taccaaatggacttcccccccggggagcaggcgccagaaaacatgacggctctggatgga
ttcatcccgtcgtgcggcgagggcgcgctggcctgctcctgcggcgactgcccctcggcg
cccggctgcgagccgccgccgcagccgccgccgcccgagccggccggctgtcccgcgctg
ggcacctcctggctgacctgtcgcgacctgtcactggctgctctctacctgggcctgctg
gcctgcctgccgctggtggtgcgcctgtccaaggaccagctggcgcagagtcgcgagtgg
cggcgctcgcaggcagccatggcggcggccgcgccaggcggcgctgccgcaggcaacggc
agcgagccgctgctgggaggagccggcggcagctccgctgaaatagaggaggacgggggc
ggaggcagggaggaggaggagccggaggagctgattcagtggcccgctgcggagcagctg
ctgcgccgctggttctaccgcctgggccgctgctgcgcgcggcgccccgccctggtgctg
gccgccagcctgctgctggtgggggcctgcgccctgggcctcacgcgcctcagggtgatg
accgaccctcaagagctgtgggtggggcccggctcgcaggcggcgcaggagaaggcggca
tacgaggctgcctttggccccttctatcgcatcacccagctcatcctcagcaccacccca
gccgccaactcctccacagccacaccctcgggcctgcctgccatcgtgacggatgagcac
atccgcctgctgtttgacatgcaagacgagatagacgccctgtcagccagctacgacgcc
cccggcagcgccggtgacggcggcggcggcggcagctggaacgtcaccctggctgacgtg
tgcctggcgccgctggggtccgcctgcgccacgcagagcgtgctgcagtactggggcatg
agccgggacgtgtttgagcacggtgagaccttcctccaggctgccctctgcatgcagtcg
tgccccgccaaggtgcggcactgttgccgcagcgcgctgggcggccccaccgacccgcac
ctggtactgggcggcttccccacagatgccgccaccttccgcaactacaccgcggatgcc
accgcctttgtggtcaccttccccatagattcacacgccgcaaacaggggcgcggcgctg
gcctgggaggcggcctttgtggagctggcatccggcctgctcagcgagatggctgagggg
gtgggcctgcgcctgtccttctccacagagcgctcggtgcaggatgagctggcacgggag
agcggctcagacgcccccaccgtgctcctgtcctatctcgtcatgctgctgtacattgcc
gtggcgctggggcgcttcccgcggggcgccgactggcgcgacgtgctgagcccgccctgc
ctgctgccctgcctcccctgcagggccgcgctggggctgggcggcgtgctcatcgtggcc
gcctctgtggtcggctctctgggcctgtgcagctgggcgggcatgagcgccaccctgatc
atcatggaggtcatacccttcctggtgctggcagtgggcgtggacaacatgttcatcctg
gctgccgcgctgcagcggcagccagagacgcacccgctgccgcacaggctgggcctggcg
ctggcggccgtggggcccagcatcaccctggcaggccagtgggcggggcgggccggaggg
ctgggctttgcatcctgcgaggtggtggcctttgccctgggaggcctcacctccatgccc
gccctgcgcaacttctccatctgcgcctcgctggcggtcctgctggactacctgctccag
gtcaccgcctttgtggcgctgctggcactggatgccaggcggctggagcaggggcgctac
gactgcatgccatgggtcaggtggggcaggggggggcaggcgctgtggagctggcgctac
gacacgcgctacgtgggcgtgtcgtctgcgctgcgctcctacatgcgccgtgtgcacgcg
ccgctgctggcccgccccgctgtcaaggcggcggtgctggcgctgtttggcggcatgttc
ctcctgtcctgcgcgctgctgccgcgcctggagaggggcctggaccagagcgtagcgctg
ccgcgagactcttacctgcaacgctactatgcagacgtggtgggccctcccgtcatgttt
gtggtgcaagggctgaatgtgagcgagggcgcgccggatgtggggcgcgtctgctccgtg
gccggctgcgacccagactcgctcctcaaccaggcaagccggcgcagccagccagccaag
cagcctacctgcccagcctgccagtcctcctggctcgacgacttcctgacctgggcctcg
ccagagataccgcaggcaagcagtggcagggcctgcttgcgcctcctcaccgtgctgcag
tgctgccgccaggacgcaaacggcacgcgctgcccgccgcccgaccagccgccctgctcc
gactcgcccgatgcctgcgccgactgcacggcatgctttgcgccctcagacctgccgggg
gggcggcccgacctgcagcagttccaggacaagctgccctggttcctggactcgctgccc
tcggctgcctgcgccaagggcggcgccggcgcctacacagacgccatccaggcccgtcgc
cgccacctgcacccatatgcctgccgcaggagcagcagcatcggcagcaagcccgcatac
gctgtgcgcgccttcaccgcgtctgcctcggagcggctgggcctgcgcctgcttccctac
tcggtcttccacatcttcttcgagcagtacctcaccatcggcggcgaggcgctcacgctg
ctgggctcggcctgcgtggccatcttcctcatctgcctggccgccacgggcagcccctgg
agcgccaccctgatcgtactcacgctgtgcatgctgctggtggatgtcatgggcttcatg
gtgctggcaggcatacagctcaatgcggtgtccctggtgaatctggtgatgtctctgggg
ataggcgtggagttctgcgcgcacctggtgcacgccttc
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