Chlorella variabilis: CHLNCDRAFT_6836
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Entry
CHLNCDRAFT_6836 CDS
T02924
Name
(RefSeq) hypothetical protein
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
cvr
Chlorella variabilis
Pathway
cvr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CHLNCDRAFT_6836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvr03041
]
CHLNCDRAFT_6836
Enzymes [BR:
cvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CHLNCDRAFT_6836
Spliceosome [BR:
cvr03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
CHLNCDRAFT_6836
Complex B
CHLNCDRAFT_6836
Complex C
U2 SnRNP specific factors
CHLNCDRAFT_6836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
17356774
NCBI-ProteinID:
XP_005849956
JGI:
ChlNC64A_1_6836
UniProt:
E1Z9Y1
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
AGVKKDVEALAALEHDGIAYSEFNKDFYEEAPDIAALTHAQVAEYRRQLGMRVSGFDAPR
PIQTFKQCGFDGPLMAAITKAGYQKPTAIQAQALPAALCGRDVLGIAKTGSGKTAAFVLP
MIVHIMDQPELQKGEGPIGVIVAPTRELAEQIHKETRRFSKAYNLGVAAAFGGLSKHQQF
KDLKAGCEVAVCTPGRMIDLIRMKACNMKRATYLVFDEADRMFDMGFEPQVRSIMGQIRP
DRQTLLFSATMPRKVERLAGDALTSPVRITVGEVGGANEDIKQVVEVVHDLGSKQKWLLD
RLQRFIDDGDVLVFANQKARVDELAAALQAAGAKVAAIHGDMDQHTRMHTLADFKAGAYH
ALVATDVAARGLDIKSIKTVVNYDAAKDIDTHVHRIGRTGRAGDKDGVAYTLLLPHETRI
AGDLVQNLATAGQEVPAMLHELAARDPRFRKGTARGKGGRG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gcaggcgtgaagaaggatgtggaggcgctggcggcgctggagcacgacggcatcgcctac
tccgagttcaacaaggacttctacgaggaggcacccgacattgcggccctgacccacgcg
caggttgccgagtaccgccgccagctgggcatgcgggtgagcggctttgacgcccctcga
ccaatccagaccttcaagcagtgcggctttgacgggcccctgatggccgccatcactaaa
gccggctaccagaagcccaccgccatccaggcgcaggcgctgccggcagcgctgtgcggc
cgcgacgtgctgggcattgccaagacgggcagcggcaagacggcggcgtttgtgctgccc
atgattgtgcacatcatggaccagcctgagctgcagaagggagagggccccatcggtgtc
attgttgcgcctacccgcgagctggcagagcagatacacaaggagacgcgccgcttcagc
aaggcgtacaacctaggcgtggcagctgcctttggcggcctgtccaagcaccagcagttc
aaggacctcaaggccggctgcgaggtggcagtgtgcacccctgggcgcatgattgatctc
atcagaatgaaggcatgcaacatgaagcgggcgacctatctggtgtttgacgaggcggac
cgcatgtttgacatgggcttcgagccccaagtgcgctccatcatgggccagatccgcccc
gacaggcagacgctgctgttcagcgccacgatgccgcgcaaggtggagcggctggcgggg
gatgcgctcaccagccccgtgcgcatcaccgtgggggaggtgggaggcgccaacgaggac
atcaagcaggtggtggaggtggtgcacgacttggggtccaaacagaagtggctgctggac
cggctgcagcgcttcatcgatgatggcgacgtgctggtgtttgccaaccagaaggcgcgg
gtggatgagctagcggcggcgctgcaggctgccggagctaaggttgccgcgatccacggc
gacatggaccagcacacacgcatgcacacgctggcagacttcaaggcgggggcctaccac
gcgctggtggccacagacgtggcggcgcggggcctggacatcaagagcatcaagacggtc
gtcaactacgatgccgccaaggacattgacacgcatgtgcaccgcatcgggcgcacgggg
agggcgggggacaaggacggtgttgcctacacgctgctgctgccgcatgagacgcgcatt
gcgggcgacctggtccagaacctggcgacggcggggcaggaggtgcctgctatgctgcat
gaactggcggcacgcgaccctcgctttcggaagggcacggcgcggggcaagggagggcgc
ggc
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integrated database retrieval system
