KEGG   Centruroides vittatus (striped bark scorpion): 136982248
Entry
136982248         CDS       T10332                                 
Symbol
Mtr4
Name
(RefSeq) exosome RNA helicase MTR4
  KO
K12598  ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
Organism
cvs  Centruroides vittatus (striped bark scorpion)
Pathway
cvs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cvs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    136982248 (Mtr4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvs03019]
    136982248 (Mtr4)
   03041 Spliceosome [BR:cvs03041]
    136982248 (Mtr4)
   03009 Ribosome biogenesis [BR:cvs03009]
    136982248 (Mtr4)
   03016 Transfer RNA biogenesis [BR:cvs03016]
    136982248 (Mtr4)
Enzymes [BR:cvs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     136982248 (Mtr4)
Messenger RNA biogenesis [BR:cvs03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    TRAMP complex
     136982248 (Mtr4)
Spliceosome [BR:cvs03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    136982248 (Mtr4)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    136982248 (Mtr4)
Ribosome biogenesis [BR:cvs03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    136982248 (Mtr4)
Transfer RNA biogenesis [BR:cvs03016]
 Eukaryotic type
  tRNA degradation factors
   TRAMP complex
    136982248 (Mtr4)
SSDB
Motif
Pfam: MTR4_beta-barrel DSHCT DEAD MTR4-like_stalk DEXQc_Suv3 Helicase_C ResIII nSTAND3 Death_3
Other DBs
NCBI-GeneID: 136982248
NCBI-ProteinID: XP_067134809
LinkDB
Position
Unknown
AA seq 1029 aa
MEDTDDLFDVFEKESKQTICKKDQESSKKAEISESDVIKSVLKEKRSFSEVDEDDDEDED
DDKEECSKKQKIALADINIEECLPRIQIHTVQTVEACLHEVAVPHNEVYKALNSPSGQPA
KEYPFILDPFQKEAILCLENNQSVLVSAHTSAGKTVVAEYAIATSLRDKQRVIYTTPIKA
LSNQKYREFYEEFKDVGLMTGDVTINPSASCLIMTTEILRSMLYRGSEVMREVGWVVFDE
IHYMRDKERGVVWEETIILLPDSVHYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRP
VPLQHYIFPAGGDGLHLVVDDNGNFREENFNTAMSVLQNAGDAAKGDAIMKGRKGGFKGE
SNCYKIVKMIMERNFAPVIVFSFSKKECEVYALQMSKLDFNTNEEKELVEEVFNNAMDVL
SEEDKKLPQVEHVLPLLKRGIGIHHSGLLPILKETIEILFSEGLIKALFATETFAMGLNM
PARTVLFTSARKFDGKSYRWVTSGEYIQMSGRAGRRGLDERGIVILMVDEKMSPSVGKEI
VKGLPDPINSAFHLTYNMVLNLLRVEEINPEYMMERSFFQFQNYAAIPQLLDKLKVLQKE
HDEIKIPRESEIGTYYKIRQQLGNLSKEFQEYLIKPQFCVPFMQPGRMIHVKNNDNDFGW
GIIINFQKKQTKDSSLTEPEYTIDVLIHVSKESAKNKLTSSLKPPPPGEKGEMQVVPIRM
HLIQQISSIRLYYPQDLRPLVNRMSVLKSIQEIHKRFPDGVPLLDPIEDMKIKESGFKDV
VRKIEAFEQRLYSHPIHNDPQLENLYSSYIKKVQIDIEIKNVKSELRKAQSLLQMEELKC
RKRVLRRMGYSSAADVIELKGRIACEISSADELLLTEMIFNGVFNDLNVHQATALLSCFV
FQEKSNEMPKLTDELSGPLRQMQEMARRIAHVCKEAKLVLDESDYVESFRPHLMDVIYAW
SKGANFGQICKMTDVFEGSIIRCMRRLEELLRQMCQASKSIGNTALENKFSEAIKLIKRD
IVFAASLYL
NT seq 3090 nt   +upstreamnt  +downstreamnt
atggaggacactgacgatttgtttgatgttttcgaaaaagaaagtaaacaaaccatatgc
aagaaagatcaggagagtagcaagaaagcagaaatttcagaatcggatgttattaagtca
gttttaaaggagaaacgaagcttcagtgaggtggatgaagatgatgatgaagacgaagat
gatgataaagaagagtgttctaaaaagcaaaagatagctttagctgatataaatatagaa
gaatgtttaccaagaatacaaatacacactgtccaaacggtggaagcatgcctccatgaa
gtagctgtacctcataatgaagtatataaagcattaaactcgccatctggtcaaccggca
aaggagtacccgttcatcctagatccgtttcagaaagaagctattttatgcttagaaaat
aaccagtccgttctcgtgtcggctcacacttcggcgggaaagaccgtcgtcgccgaatat
gccatcgccacatctctgagagacaagcagcgtgttatctacacgacgcccattaaagct
ctcagtaatcagaagtacagagaattttatgaagaatttaaagatgtgggactgatgacg
ggagacgtaacaataaatccgtcggcgagttgtctgataatgactacggaaattctcaga
agcatgctttatagagggtcggaggtcatgagagaagtcggttgggttgttttcgacgaa
attcattatatgagagataaagagagaggtgttgtgtgggaagaaacgatcattttattg
ccagatagtgtacattatgtatttttatctgcaacaattcctaatgctagacagtttgca
gaatgggtttgtcacttgcataagcaaccttgtcatgtcgtatataccgattatagaccc
gtgccgcttcaacactacatatttcccgccggtggagatggtttgcatcttgttgtagat
gataatggaaacttcagggaagaaaactttaatacggctatgtcggtgcttcagaatgct
ggtgatgcagctaaaggtgatgcaattatgaaaggaagaaaaggaggatttaaaggagaa
tcgaattgttataaaattgtcaaaatgattatggaaagaaattttgcaccggtgattgtt
ttcagttttagtaaaaaagaatgtgaagtatatgctttacaaatgtcgaaattagatttt
aacactaatgaagaaaaagaattagtggaagaagtattcaataatgctatggatgtatta
tcggaagaagataagaaactccctcaggtagaacacgttcttccactgcttaagagagga
attggcattcatcattctggactgttgccaatattaaaagaaaccatagaaattctgttt
tcagaaggactgataaaagctttgtttgctacggaaacatttgccatgggtttaaatatg
ccagcgaggacagttttattcaccagtgctcgcaaatttgatggaaagagttacagatgg
gtcacatctggcgaatatattcaaatgagcggtagagctggtagaagaggattggatgaa
agagggatagtaattcttatggttgacgaaaaaatgagtccttcggttggtaaagaaata
gtgaaaggtttaccggatccaattaacagtgcattccatttaacatataacatggtgctt
aacttattaagagttgaagaaataaatccagaatatatgatggaacgatctttctttcag
tttcagaattatgctgccattccacaacttcttgataaattaaaagtactacaaaaggaa
catgatgaaataaaaattcctcgcgaatccgaaataggaacgtactacaaaatacgacaa
cagttgggcaatttaagtaaagagtttcaggaatacctcattaaaccgcagttttgcgtt
ccctttatgcagcctggtcgcatgatacatgtaaaaaataatgataatgattttggttgg
ggaattatcataaatttccagaaaaagcagactaaagatagtagtctaaccgaaccagaa
tatacaatagatgtattaattcatgttagtaaagaaagtgcaaaaaataaactcacttcg
tcattaaaaccaccaccacctggcgagaaaggcgaaatgcaagtcgttcccataaggatg
catctaatacaacaaattagctcaattcgtttgtattatccccaagatttgcgaccatta
gtgaataggatgtccgtgctgaaatctattcaagaaatacataaacgatttcctgacggt
gtacctttgttagatcccatcgaagatatgaagattaaagaaagtggctttaaggacgtg
gtacgaaaaattgaagcatttgaacaaaggttatactctcatccaatacataacgatccc
caattagaaaatttatacagttcttatattaaaaaagtgcagatagatattgaaataaaa
aatgtcaaatcagaattgagaaaggctcagagtttattacaaatggaagaattaaaatgc
agaaaacgggtgttaagaagaatgggctacagttcggccgccgacgtaatcgaattaaaa
ggaagaatcgcttgcgaaataagtagtgcagacgaattactattgacggagatgattttt
aacggcgttttcaacgatctgaacgtccatcaggctacggcattactgtcttgttttgtg
tttcaagaaaagtctaacgaaatgccgaagttaacggacgaactttcgggaccactgaga
cagatgcaagaaatggcgcgtagaattgcacacgtctgcaaagaagcaaaattagttttg
gacgaaagtgattacgtcgaatctttcagaccccatctaatggatgtcatttatgcatgg
agcaagggagcaaattttggacaaatttgtaaaatgactgacgtatttgaaggcagcatc
atcagatgcatgcgccgtctagaagaattactcagacagatgtgtcaggcttccaagtcc
attggaaatacggctttagaaaataaattttccgaagcaatcaaattaattaagagagac
attgtatttgcagcaagtttatacttataa

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