Entry |
|
Symbol |
Mtr4
|
Name |
(RefSeq) exosome RNA helicase MTR4
|
KO |
|
Organism |
cvs Centruroides vittatus (striped bark scorpion)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cvs00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136982248 (Mtr4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cvs03019]
136982248 (Mtr4)
03041 Spliceosome [BR:cvs03041]
136982248 (Mtr4)
03009 Ribosome biogenesis [BR:cvs03009]
136982248 (Mtr4)
03016 Transfer RNA biogenesis [BR:cvs03016]
136982248 (Mtr4)
Enzymes [BR:cvs01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136982248 (Mtr4)
Messenger RNA biogenesis [BR:cvs03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
136982248 (Mtr4)
Spliceosome [BR:cvs03041]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
136982248 (Mtr4)
Complex C
U4/U6.U5 tri-SnRNP related factors
136982248 (Mtr4)
Ribosome biogenesis [BR:cvs03009]
Eukaryotic type
Pre-60S particles
Helicases
136982248 (Mtr4)
Transfer RNA biogenesis [BR:cvs03016]
Eukaryotic type
tRNA degradation factors
TRAMP complex
136982248 (Mtr4)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
1029 aa
MEDTDDLFDVFEKESKQTICKKDQESSKKAEISESDVIKSVLKEKRSFSEVDEDDDEDED
DDKEECSKKQKIALADINIEECLPRIQIHTVQTVEACLHEVAVPHNEVYKALNSPSGQPA
KEYPFILDPFQKEAILCLENNQSVLVSAHTSAGKTVVAEYAIATSLRDKQRVIYTTPIKA
LSNQKYREFYEEFKDVGLMTGDVTINPSASCLIMTTEILRSMLYRGSEVMREVGWVVFDE
IHYMRDKERGVVWEETIILLPDSVHYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRP
VPLQHYIFPAGGDGLHLVVDDNGNFREENFNTAMSVLQNAGDAAKGDAIMKGRKGGFKGE
SNCYKIVKMIMERNFAPVIVFSFSKKECEVYALQMSKLDFNTNEEKELVEEVFNNAMDVL
SEEDKKLPQVEHVLPLLKRGIGIHHSGLLPILKETIEILFSEGLIKALFATETFAMGLNM
PARTVLFTSARKFDGKSYRWVTSGEYIQMSGRAGRRGLDERGIVILMVDEKMSPSVGKEI
VKGLPDPINSAFHLTYNMVLNLLRVEEINPEYMMERSFFQFQNYAAIPQLLDKLKVLQKE
HDEIKIPRESEIGTYYKIRQQLGNLSKEFQEYLIKPQFCVPFMQPGRMIHVKNNDNDFGW
GIIINFQKKQTKDSSLTEPEYTIDVLIHVSKESAKNKLTSSLKPPPPGEKGEMQVVPIRM
HLIQQISSIRLYYPQDLRPLVNRMSVLKSIQEIHKRFPDGVPLLDPIEDMKIKESGFKDV
VRKIEAFEQRLYSHPIHNDPQLENLYSSYIKKVQIDIEIKNVKSELRKAQSLLQMEELKC
RKRVLRRMGYSSAADVIELKGRIACEISSADELLLTEMIFNGVFNDLNVHQATALLSCFV
FQEKSNEMPKLTDELSGPLRQMQEMARRIAHVCKEAKLVLDESDYVESFRPHLMDVIYAW
SKGANFGQICKMTDVFEGSIIRCMRRLEELLRQMCQASKSIGNTALENKFSEAIKLIKRD
IVFAASLYL |
NT seq |
3090 nt +upstreamnt +downstreamnt
atggaggacactgacgatttgtttgatgttttcgaaaaagaaagtaaacaaaccatatgc
aagaaagatcaggagagtagcaagaaagcagaaatttcagaatcggatgttattaagtca
gttttaaaggagaaacgaagcttcagtgaggtggatgaagatgatgatgaagacgaagat
gatgataaagaagagtgttctaaaaagcaaaagatagctttagctgatataaatatagaa
gaatgtttaccaagaatacaaatacacactgtccaaacggtggaagcatgcctccatgaa
gtagctgtacctcataatgaagtatataaagcattaaactcgccatctggtcaaccggca
aaggagtacccgttcatcctagatccgtttcagaaagaagctattttatgcttagaaaat
aaccagtccgttctcgtgtcggctcacacttcggcgggaaagaccgtcgtcgccgaatat
gccatcgccacatctctgagagacaagcagcgtgttatctacacgacgcccattaaagct
ctcagtaatcagaagtacagagaattttatgaagaatttaaagatgtgggactgatgacg
ggagacgtaacaataaatccgtcggcgagttgtctgataatgactacggaaattctcaga
agcatgctttatagagggtcggaggtcatgagagaagtcggttgggttgttttcgacgaa
attcattatatgagagataaagagagaggtgttgtgtgggaagaaacgatcattttattg
ccagatagtgtacattatgtatttttatctgcaacaattcctaatgctagacagtttgca
gaatgggtttgtcacttgcataagcaaccttgtcatgtcgtatataccgattatagaccc
gtgccgcttcaacactacatatttcccgccggtggagatggtttgcatcttgttgtagat
gataatggaaacttcagggaagaaaactttaatacggctatgtcggtgcttcagaatgct
ggtgatgcagctaaaggtgatgcaattatgaaaggaagaaaaggaggatttaaaggagaa
tcgaattgttataaaattgtcaaaatgattatggaaagaaattttgcaccggtgattgtt
ttcagttttagtaaaaaagaatgtgaagtatatgctttacaaatgtcgaaattagatttt
aacactaatgaagaaaaagaattagtggaagaagtattcaataatgctatggatgtatta
tcggaagaagataagaaactccctcaggtagaacacgttcttccactgcttaagagagga
attggcattcatcattctggactgttgccaatattaaaagaaaccatagaaattctgttt
tcagaaggactgataaaagctttgtttgctacggaaacatttgccatgggtttaaatatg
ccagcgaggacagttttattcaccagtgctcgcaaatttgatggaaagagttacagatgg
gtcacatctggcgaatatattcaaatgagcggtagagctggtagaagaggattggatgaa
agagggatagtaattcttatggttgacgaaaaaatgagtccttcggttggtaaagaaata
gtgaaaggtttaccggatccaattaacagtgcattccatttaacatataacatggtgctt
aacttattaagagttgaagaaataaatccagaatatatgatggaacgatctttctttcag
tttcagaattatgctgccattccacaacttcttgataaattaaaagtactacaaaaggaa
catgatgaaataaaaattcctcgcgaatccgaaataggaacgtactacaaaatacgacaa
cagttgggcaatttaagtaaagagtttcaggaatacctcattaaaccgcagttttgcgtt
ccctttatgcagcctggtcgcatgatacatgtaaaaaataatgataatgattttggttgg
ggaattatcataaatttccagaaaaagcagactaaagatagtagtctaaccgaaccagaa
tatacaatagatgtattaattcatgttagtaaagaaagtgcaaaaaataaactcacttcg
tcattaaaaccaccaccacctggcgagaaaggcgaaatgcaagtcgttcccataaggatg
catctaatacaacaaattagctcaattcgtttgtattatccccaagatttgcgaccatta
gtgaataggatgtccgtgctgaaatctattcaagaaatacataaacgatttcctgacggt
gtacctttgttagatcccatcgaagatatgaagattaaagaaagtggctttaaggacgtg
gtacgaaaaattgaagcatttgaacaaaggttatactctcatccaatacataacgatccc
caattagaaaatttatacagttcttatattaaaaaagtgcagatagatattgaaataaaa
aatgtcaaatcagaattgagaaaggctcagagtttattacaaatggaagaattaaaatgc
agaaaacgggtgttaagaagaatgggctacagttcggccgccgacgtaatcgaattaaaa
ggaagaatcgcttgcgaaataagtagtgcagacgaattactattgacggagatgattttt
aacggcgttttcaacgatctgaacgtccatcaggctacggcattactgtcttgttttgtg
tttcaagaaaagtctaacgaaatgccgaagttaacggacgaactttcgggaccactgaga
cagatgcaagaaatggcgcgtagaattgcacacgtctgcaaagaagcaaaattagttttg
gacgaaagtgattacgtcgaatctttcagaccccatctaatggatgtcatttatgcatgg
agcaagggagcaaattttggacaaatttgtaaaatgactgacgtatttgaaggcagcatc
atcagatgcatgcgccgtctagaagaattactcagacagatgtgtcaggcttccaagtcc
attggaaatacggctttagaaaataaattttccgaagcaatcaaattaattaagagagac
attgtatttgcagcaagtttatacttataa |