Centruroides vittatus (striped bark scorpion): 136987041
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Entry
136987041 CDS
T10332
Symbol
Hel25E
Name
(RefSeq) spliceosome RNA helicase Ddx39b
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
cvs Centruroides vittatus (striped bark scorpion)
Pathway
cvs03013
Nucleocytoplasmic transport
cvs03015
mRNA surveillance pathway
cvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136987041 (Hel25E)
09122 Translation
03013 Nucleocytoplasmic transport
136987041 (Hel25E)
03015 mRNA surveillance pathway
136987041 (Hel25E)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvs03019
]
136987041 (Hel25E)
03041 Spliceosome [BR:
cvs03041
]
136987041 (Hel25E)
Enzymes [BR:
cvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136987041 (Hel25E)
Messenger RNA biogenesis [BR:
cvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136987041 (Hel25E)
Spliceosome [BR:
cvs03041
]
Complex C
Other components
EJC/TREX
136987041 (Hel25E)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
136987041 (Hel25E)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
136987041
NCBI-ProteinID:
XP_067140782
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MAENEQDLLDYEEEEEQEQTTTETATETKKPACGYVAIHSSGFRDFLLKPELLRAIVDCG
FEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLDTVEGQVSVLVMCHTRE
LAFQISKEYERFSKYMPGIKVGVFFGGMNIANDEKILKVNCPHIVVGTPGRILALVRSKK
LNLRHIKHFILDECDKMLEQLDMRRDVQEIFRNTPHEKQVMMFSATLSKEIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQYYVKLKDNEKNRKLFELLDVLEFNQVVIFVRTVQRCMALA
QLLVEQNFPAIAIHRAMTQEERLSRYQQFKDFHKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSDESDAKILNEVQDRFDVNISELPDEIDISSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatgaacaagaccttcttgattatgaagaggaggaggaacaagaacagaca
actactgaaactgcaacagaaacaaaaaagccagcctgtggatatgttgcaattcacagt
tcgggattcagagattttcttcttaaacctgaattgctaagagctattgttgattgtggt
tttgaacatccatcagaagtgcaacatgaatgtattcctcaagccattttgggaatggat
atcctttgtcaagcaaaatcgggaatgggtaaaacagctgttttcgttttggctacactt
caacaattggacactgtagaaggacaagtttctgttctggtgatgtgccatacaagagaa
ttggcttttcagatttctaaagaatatgaacgattttcaaaatatatgccaggcattaaa
gttggagtattttttggaggaatgaatatagcaaatgatgaaaagatcctgaaagttaac
tgccctcatattgttgtaggaacacctggtcgtatcctagcattggtacgaagcaaaaaa
ttaaatctgcgtcatatcaagcattttattttagatgaatgtgacaaaatgcttgaacaa
ttagatatgagacgtgatgtacaagaaatattcagaaatacaccacatgaaaagcaagtg
atgatgttcagtgctacactcagcaaggagattcgtccagtctgcaagaagtttatgcaa
gacccaatggaagtatatgtagatgatgaagcaaaattaactttgcatgggttacaacaa
tattatgtgaaattgaaggacaacgaaaaaaatcgcaaattgttcgagcttctggatgtt
ttggaattcaaccaggtggtgatatttgttcgtactgttcaaagatgtatggcccttgct
cagttgcttgtagaacagaattttcctgcaatagcaattcatagagctatgactcaagaa
gagagattatctcgctatcaacaatttaaagactttcataaacgaattctagttgctaca
aacttgtttggaagaggaatggatattgaaagagtgaatattgtctttaattatgatatg
ccagaagattcagatacctatcttcatagggttgcccgtgctggtcgatttggcacaaaa
ggtttggcaattacttttgtatcggatgagagtgatgcaaaaattctcaatgaagtacag
gatcgtttcgacgtcaatatatctgaactccctgacgaaattgatatttcatcatacatt
gaaggacgctaa
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