Centruroides vittatus (striped bark scorpion): 136989033
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Entry
136989033 CDS
T10332
Name
(RefSeq) collagen alpha-1(II) chain-like isoform X1
KO
K19719
collagen type II alpha
Organism
cvs Centruroides vittatus (striped bark scorpion)
Pathway
cvs04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
136989033
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cvs00536
]
136989033
Glycosaminoglycan binding proteins [BR:
cvs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136989033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
FnI_RECK
Motif
Other DBs
NCBI-GeneID:
136989033
NCBI-ProteinID:
XP_067143179
LinkDB
All DBs
Position
Unknown
AA seq
1479 aa
AA seq
DB search
MTLYPSWVIISIIVLLTCQVLAQFDSQYDDEDEDITVCLYDNVSYQDGEEWYPDPCTTCK
CFSGNPVCETEKCQEIECKTHEFIPLGKCCPICADEEEGTGGTTDIPRPPDPGLPREPVI
PVVGLPGERGTPGEQGFPGRPGERGQPGESGAHGIPGMPGPPGPPGDLSSWFHQLSLQQG
IGGDKGPPPDAFQFMQAQVGPVGPRGSPGPPGPSGPQGFQGIRGEPGEPGPPGPPGQIGE
RGLPGLPGKDGEPGEDGRMGPLGPAGPPGPRGLPGMPGLPGTKGHRGFPGLDGAKGEQGP
TGEKGSQGPHGKMGLAGPMGPPGPRGERGREGPPGPPGLRGIDGLPGPPGPPGPIGRPGP
PGFPGSPGSKGDAGATGPKGIQGLQGPRGEPGKPGIPGEPGPMGPPGKDGVPGEKGSHGD
AGPPGSPGFPGARGPPGLSGSPGLPGPKGSPGIRGDSGAKGETGIKGEQGTAGPRGLPGT
PGSAGKRGKMGSPGPPGPPGSAGERGSPGPRGLPGSDGPIGMKGTQGDRGPHGPQGSKGS
QGEIGRPGPPGLQGPRGLPGRPGIPGKDGAPGDRGPPGADGKPGEQGPQGIQGVPGMIGL
PGGKGDQGEAGQDGLPGQPGPPGPRGDSGKEGSPGPAGPSGPTGEPGERGPPGPQGARGF
QGLPGIPGNPGQAGKDGEPGLPGPPGPAGINGERGERGFPGERGRPGAPGPPGAQGEQGP
TGQDGIKGPPGEKGAKGHSGPIGLQGAQGARGEPGPPGHKGDRGDHGSPGPEGPVGRPGE
QGPQGIVGPAGPPGEAGEKGETGPPGPDGPPGGPGIQGDRGPPGPLGQQGFPGPQGLPGA
SGPKGARGLPGPKGDQGNVGIPGPPGETGPQGLPGLRGPKGPRGEEGKKGDAGFPGAPGR
PGEPGLAGVPGNPGPAGPAGIAGIKGAPGDVGKIGAAGPSGNPGLPGFPGPKGEAGAEGS
PGLQGPPGPSGPPGERGLPGVPGVQGRVGPPGPRGQQGERGPEGKSGSDGPPGPVGPQGP
PGPPGPPGETGPQGHSGKEGQPGISGRPGDKGPPGPPGLPGAAGIQGLQGPVGPTGPSGL
PGERGDRGETGPRGVPGPQGPRGPSGPTGNAGMKGDRGFQGEQGPKGHRGLIGLQGLPGP
PGIPGDKGNVGPPGQIGMEGSPGMKGPQGRDGSPGPPGIPGPPGPRGPSGDSGKQGPPGS
PGPAGPPGPPGEPFGYDANAIAALLGQGQVKGPDPLLGDEPAKLFSPETPLEEKKKLVFE
YYDKLVQEYEEFRKPSGNKDTPATTCRDLAVARPELPSGMYYVDPNQGDNIDAIEVYCDM
EKRATCIKAKPEQTSKKSYYRGKSQYTWFSEMESGFMFTYAADRVQMTFLQLHSKQAEQN
ITYHCRNSVGYYDEARRSLKRAVKLMSYNDLELIAEGNAMFTYASLEDSCQHRSNKWAKT
VLQYKTDKPQRLPIVDIAPRDIGARNQEFGIELGPVCFS
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgaccctctacccgtcctgggtcattatttctattattgtgcttctcacctgtcaagtt
ttggcacaatttgactcacagtacgatgacgaagatgaagatataactgtttgtttgtat
gacaatgtatcatatcaagatggagaagaatggtatccagacccttgcacaacatgcaaa
tgcttttctggaaatccagtatgtgaaacagaaaaatgtcaagaaattgaatgtaaaact
catgagttcattccattaggaaaatgctgtcctatatgtgcagatgaagaagaaggaact
ggaggtacaactgatataccaaggccaccagatccaggtcttccacgagaacctgtgata
cctgttgtagggcttcctggagaaaggggaactcctggagaacaaggatttcctggaaga
ccaggtgaaaggggccagcctggtgaatcaggagctcatggaataccaggaatgccaggt
ccaccaggacctcctggagatttatcgagttggttccatcagttatctttacaacaaggt
attggaggtgacaaaggacccccacctgatgcattccagtttatgcaagctcaagtagga
ccagtaggcccacgtggttcaccaggccctcctggaccttcgggaccacagggatttcaa
ggaatacgaggagaaccaggagaacctggaccaccaggaccaccaggtcaaattggtgag
agaggtttacctggcttacctggaaaagatggagaacctggagaagatggtagaatggga
ccacttggacctgcaggacctcctggaccaagaggtttgcctgggatgcctggccttcct
ggaaccaaaggacataggggatttccaggtttggatggtgcaaaaggtgaacagggacca
actggagaaaagggatctcaaggaccacatggtaaaatggggttggctggaccaatgggt
ccacctggaccaagaggtgaacgtggtagagaaggaccaccaggaccacctggtttaaga
ggaattgatggattacctggaccaccaggacctccaggaccaattgggagaccaggacct
ccaggctttccaggatctcctggctctaagggagatgctggtgcaacaggtccaaaaggt
attcaaggacttcaagggccaagaggagaaccaggtaaaccaggaattcctggtgagcct
ggtcctatgggaccaccaggaaaagacggtgttccaggagaaaaaggttcacatggagat
gcaggaccaccaggttcaccaggttttccaggtgcaagaggtcctcctggcttatctgga
agcccaggtcttcctggaccaaaaggatctcctggaataagaggagattcaggtgcaaaa
ggtgaaacaggaataaaaggtgaacaaggtactgcaggaccaagaggattgccaggaact
cctggatcagcaggaaaaagaggtaaaatgggatcacctggaccaccgggtcctcctggt
tcagctggtgaaagaggtagtcctggtccacgaggtcttcctggatctgatggtcctatt
ggaatgaagggtactcaaggagatcgtggtcctcatggtcctcaaggttctaaaggttct
cagggagaaattggaagacctggaccacctggattacaaggacccagaggcttgccaggt
cgtcctggaattcctggaaaagatggagcacctggagatagaggtcctccaggagcagat
ggtaaacctggtgaacaaggtccacagggaattcaaggtgtacctggaatgataggatta
ccaggaggaaaaggagatcaaggtgaagcaggacaagatggtttaccaggacagcctggt
ccaccaggaccaagaggagattcaggaaaagaaggatctcctggtccagcagggccatct
gggcctactggagaaccaggagagaggggtcctcctggtcctcagggagcaagaggattt
caaggtttaccaggcatacctggaaatcctggtcaagcaggaaaagatggagaacccgga
ttgcctggtccacctggtccagctggaataaatggagaaagaggtgaaagaggatttcct
ggggaaagaggaagaccaggtgcaccaggaccacctggagcccagggtgaacaaggacct
actggtcaagatggaataaaaggtccacctggagaaaaaggagctaaaggtcattctggt
cctattggtttacaaggtgctcaaggtgcaagaggagaaccaggaccacctggacataaa
ggtgatagaggagatcatggatcaccaggtccagaaggtcctgttgggagacctggagaa
caaggacctcaaggcattgtaggacctgcaggaccaccaggggaagcaggagaaaaaggt
gaaacaggacctcctggtccagatggtcctcctggtggacctggaatacaaggtgacagg
ggtccacctggtcctcttggtcagcaaggatttcctggaccacagggtcttcctggtgct
tctggtcctaaaggtgctcgaggtttgccaggtccaaagggtgatcaaggtaatgttgga
attcctgggcctcctggagaaactggacctcaaggtcttcctggacttagaggaccaaaa
ggaccaagaggagaagaggggaaaaaaggtgatgctggttttccaggggcacctggtcgc
ccaggagaaccaggattggctggtgtacctggaaaccctgggcctgctggaccagctgga
attgcaggaataaagggtgctccaggagatgttggaaaaattggtgcagcaggtccttct
ggaaatcctggtcttccaggattccctgggccaaaaggagaagctggagcagaaggatca
cctggtttacaagggcctccaggtccatctggtccacctggagagcgtggattacctgga
gttcctggagtacaaggacgtgttggccctcctggtcccagaggacaacagggagaaaga
ggtccagaaggaaaaagtggttcagatggaccaccaggaccagtaggccctcaaggacct
cctggtcctccaggtcctccaggagaaacagggccacaaggtcattccggaaaagaagga
cagccaggaattagtggacgcccaggagataaaggaccaccaggacctccaggcttacca
ggtgctgctggtattcaaggtttacagggaccagttggacctacaggaccttcaggatta
ccaggagaacgtggtgatcgaggtgaaacaggtccaagaggtgtaccaggacctcagggt
cctagaggtccttctggacccactggaaatgctggtatgaaaggagatagaggtttccaa
ggtgagcaaggtcctaaaggtcatcgaggactaataggtctacaaggattacctggacca
ccaggtatccctggtgataaaggaaatgttggaccacctggtcaaattggcatggagggt
tctccaggcatgaaaggaccacaaggtagagatggaagtcctggtcctccaggcattcca
ggaccacctggaccacgtggaccaagtggagattctggtaaacaaggcccaccaggatca
ccaggccctgctggtccaccaggaccaccaggtgaaccttttggttatgatgcaaatgca
atagcagcattattaggtcaaggacaagtaaagggaccagatcctctgttaggcgatgaa
ccagcaaaactattttcacctgaaacacctcttgaagaaaaaaagaaactcgtatttgaa
tattatgataaattggttcaagaatatgaagaattccgaaaaccatctggaaataaggac
acacctgctacaacatgtcgtgatcttgctgtcgcaagaccagaattgcctagtggtatg
tattatgtggatcctaatcaaggcgataatattgatgcaattgaagtctattgtgacatg
gaaaagagggcaacttgtattaaagccaaacctgaacaaacatcgaagaaaagttattat
agaggaaagagccaatatacttggttcagtgagatggaatctggatttatgtttacatat
gcagctgatagagtacaaatgacttttctgcaattgcatagtaaacaagccgaacagaat
attacatatcactgccgtaattctgttgggtattatgatgaagcgaggagatcattaaag
agagcagttaagttaatgtcctacaatgatttagaattgatagcagaaggcaatgccatg
tttacttatgcttctctagaagacagctgtcagcatcgttcaaacaaatgggccaagact
gtgttacaatacaaaactgacaagccacaacgtttgccaatagtagatattgcaccccgt
gatattggtgctagaaatcaagaatttggtatagaattaggaccagtctgcttctcctag
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integrated database retrieval system
