Corynebacterium vitaeruminis: B843_03730
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Entry
B843_03730 CDS
T03042
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cvt
Corynebacterium vitaeruminis
Brite
KEGG Orthology (KO) [BR:
cvt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvt03016
]
B843_03730
Enzymes [BR:
cvt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
B843_03730
Transfer RNA biogenesis [BR:
cvt03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
B843_03730
Prokaryotic type
tRNA splicing ligases
B843_03730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AHI22137
UniProt:
W5XYV3
LinkDB
All DBs
Position
complement(788056..789009)
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AA seq
317 aa
AA seq
DB search
MIGVRTGFTASDLAGGDLTRLRDTIEAAIPLSPGNYNEWILGGSAEARTRELAALAEDTG
VDLSHSPKWRQQLGSLGGGNHFIELCLDEEDRVWMFLHSGSRGVGNKIAQKHIAAAQEQC
DKHWVLLENRDLAYLVEDTAEFDSYIADLAWAQRFAWLNREEMMDRFARVLGEFVGAEVA
EAERINCHHNYTQVEEHCGREVWLTRKGAIRADEGVKALIPGSMGTSSYVVSGKGFAPAL
RSAPHGAGRRFSRTEARKRFTAADLDERMGGIVYRPGDAWVDEIPDAYKDIDQVIVDVEK
LVSVDHKLHQILNVKGT
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcgtgcgcaccggattcaccgccagcgacctggctggaggcgatctcacccgc
ctacgcgacaccatcgaggcggcgatcccgctgtcccccggcaactacaacgaatggatc
ctcggcggcagcgccgaggcacgcacccgggaactcgccgcgctggccgaagacacaggc
gttgacttgtcgcactccccgaagtggcgccagcagctcggctcgctcggcggcggcaac
cactttatcgagctgtgcctcgacgaggaggaccgggtgtggatgttcctgcattccggc
tcgcgcggggtgggcaacaagattgctcagaagcacatcgccgcggcccaggagcagtgc
gataagcactgggtgctgctggagaaccgcgaccttgcgtacctcgtggaggacacggcc
gagttcgactcctacatcgccgatctcgcctgggcgcagcgcttcgcatggctcaaccgc
gaggagatgatggaccgcttcgctcgcgtgctgggagagttcgtcggtgccgaggtggca
gaggccgagcggatcaactgccaccacaactacacccaggtggaggagcattgcgggcgc
gaggtgtggttgacccgcaagggcgcgatccgcgccgacgagggcgtcaaggcgctcatc
cctggctcgatgggaacctcgagctacgttgtgtcgggcaaaggcttcgccccggcgctg
cgctcggcaccgcacggcgcgggccgacgcttctcgcgcaccgaggcccgcaaacggttc
accgccgcggacctagacgagcgcatgggcgggattgtctaccgccccggcgacgcgtgg
gtggatgagatcccagacgcctacaaggacatcgaccaggtcatagtggacgttgagaag
ctggtcagcgtcgatcacaagctgcaccagatcctcaacgtcaagggcacctag
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integrated database retrieval system
